Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001168-TA|BGIBMGA001168-PA|undefined
(615 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC001731-1|AAH01731.2| 709|Homo sapiens cell cycle associated p... 141 8e-33
Z48042-1|CAA88096.1| 649|Homo sapiens GPI-anchored protein p137... 139 2e-32
BC117673-1|AAI17674.1| 905|Homo sapiens CAPRIN2 protein protein. 114 8e-25
BC117672-1|AAI17673.1| 960|Homo sapiens CAPRIN2 protein protein. 114 8e-25
AY074490-1|AAL71549.1| 1077|Homo sapiens EEG1L protein. 114 8e-25
AY074491-1|AAL71550.1| 278|Homo sapiens EEG1S protein. 91 1e-17
BX537569-1|CAD97786.1| 173|Homo sapiens hypothetical protein pr... 70 3e-11
U66616-1|AAC50694.1| 1213|Homo sapiens SWI/SNF complex 170 KDa s... 36 0.42
BT009924-1|AAP88926.1| 1130|Homo sapiens SWI/SNF related, matrix... 36 0.42
BC026222-1|AAH26222.1| 1214|Homo sapiens SWI/SNF related, matrix... 36 0.42
BC013045-1|AAH13045.1| 1130|Homo sapiens SWI/SNF related, matrix... 36 0.42
BC009067-1|AAH09067.1| 465|Homo sapiens SMARCC2 protein protein. 36 0.42
AB209293-1|BAD92530.1| 1156|Homo sapiens SWI/SNF-related matrix-... 36 0.42
AB209006-1|BAD92243.1| 1164|Homo sapiens SWI/SNF-related matrix-... 36 0.42
BC001460-1|AAH01460.2| 1019|Homo sapiens La ribonucleoprotein do... 32 6.9
AK091465-1|BAC03668.1| 816|Homo sapiens protein ( Homo sapiens ... 32 6.9
AB018274-1|BAA34451.1| 1096|Homo sapiens KIAA0731 protein protein. 32 6.9
AF010403-1|AAC51734.1| 5262|Homo sapiens ALR protein. 31 9.1
>BC001731-1|AAH01731.2| 709|Homo sapiens cell cycle associated
protein 1 protein.
Length = 709
Score = 141 bits (341), Expect = 8e-33
Identities = 78/220 (35%), Positives = 121/220 (55%), Gaps = 6/220 (2%)
Query: 4 AANAKSEKPASSED--KDTPIRQIMTIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQK 61
AA S+ PA+ + ++QI+ +I+ K+RNLEK+K KL Y++ G+ LN DQ
Sbjct: 34 AAAPASQHPATGTGAVQTEAMKQILGVIDKKLRNLEKKKGKLDDYQERMNKGERLNQDQL 93
Query: 62 VAVAKYDEVAQTLEFARDLSKQVTAIAISSXXXXXXXXXXXXWVRYAAETNKIKEVLLIL 121
AV+KY EV LEFA++L + A++ +R AE ++K VL +
Sbjct: 94 DAVSKYQEVTNNLEFAKELQRSFMALSQDIQKTIKKTARREQLMREEAEQKRLKTVLELQ 153
Query: 122 DCLMQMGSADARTDFINGTNGAAKLTEDDLKILDDLYPEVTPKHELNEEGQSGFHLQITR 181
L ++G + RTD G NG L+E++L +LD+ Y V P+ +++ + Q
Sbjct: 154 YVLDKLGDDEVRTDLKQGLNGVPILSEEELSLLDEFYKLVDPERDMSLR----LNEQYEH 209
Query: 182 AAEHLYSIIDGKPKEVLGTTYLRIKEIVSTVHECGYFDKT 221
A+ HL+ +++GK K V GTTY +KEIV V + YFD T
Sbjct: 210 ASIHLWDLLEGKEKPVCGTTYKVLKEIVERVFQSNYFDST 249
>Z48042-1|CAA88096.1| 649|Homo sapiens GPI-anchored protein p137
protein.
Length = 649
Score = 139 bits (337), Expect = 2e-32
Identities = 73/200 (36%), Positives = 113/200 (56%), Gaps = 4/200 (2%)
Query: 22 IRQIMTIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYDEVAQTLEFARDLS 81
++QI+ +I+ K+RNLEK+K KL Y++ G+ LN DQ AV+KY EV LEFA++L
Sbjct: 1 MKQILGVIDKKLRNLEKKKGKLDDYQERMNKGERLNQDQLDAVSKYQEVTNNLEFAKELQ 60
Query: 82 KQVTAIAISSXXXXXXXXXXXXWVRYAAETNKIKEVLLILDCLMQMGSADARTDFINGTN 141
+ A++ +R AE ++K VL + L ++G + RTD G N
Sbjct: 61 RSFMALSQDIQKTIKKTARREQLMREEAEQKRLKTVLELQYVLDKLGDDEVRTDLKQGLN 120
Query: 142 GAAKLTEDDLKILDDLYPEVTPKHELNEEGQSGFHLQITRAAEHLYSIIDGKPKEVLGTT 201
G L+E++L +LD+ Y V P+ +++ + Q A+ HL+ +++GK K V GTT
Sbjct: 121 GVPILSEEELSLLDEFYKLVDPERDMSLR----LNEQYEHASIHLWDLLEGKEKPVCGTT 176
Query: 202 YLRIKEIVSTVHECGYFDKT 221
Y +KEIV V + YFD T
Sbjct: 177 YKVLKEIVERVFQSNYFDST 196
>BC117673-1|AAI17674.1| 905|Homo sapiens CAPRIN2 protein protein.
Length = 905
Score = 114 bits (275), Expect = 8e-25
Identities = 65/211 (30%), Positives = 108/211 (51%), Gaps = 4/211 (1%)
Query: 9 SEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYD 68
S + S+ +T I + ++HKIRN+EK+K KL Y+D K+G+ LN DQ AV KY+
Sbjct: 109 SSAASPSQAYETYIENGLICLKHKIRNIEKKKLKLEDYKDRLKSGEHLNPDQLEAVEKYE 168
Query: 69 EVAQTLEFARDLSKQVTAIAISSXXXXXXXXXXXXWVRYAAETNKIKEVLLILDCLMQMG 128
EV LEFA++L K + +++ ++ AE K++ +L + L +
Sbjct: 169 EVLHNLEFAKELQKTFSGLSLDLLKAQKKAQRREHMLKLEAEKKKLRTILQVQYVLQNLT 228
Query: 129 SADARTDFINGTNGAAKLTEDDLKILDDLYPEVTPKHELNEEGQSGFHLQITRAAEHLYS 188
+ DF G NGA L +L L P E NE Q+ +++ + +
Sbjct: 229 QEHVQKDFKGGLNGAVYLPSKELDYLIKFSKLTCP--ERNE--SLSVEDQMEQSSLYFWD 284
Query: 189 IIDGKPKEVLGTTYLRIKEIVSTVHECGYFD 219
+++G K V+GTTY +K+++S + GYF+
Sbjct: 285 LLEGSEKAVVGTTYKHLKDLLSKLLNSGYFE 315
>BC117672-1|AAI17673.1| 960|Homo sapiens CAPRIN2 protein protein.
Length = 960
Score = 114 bits (275), Expect = 8e-25
Identities = 65/211 (30%), Positives = 108/211 (51%), Gaps = 4/211 (1%)
Query: 9 SEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYD 68
S + S+ +T I + ++HKIRN+EK+K KL Y+D K+G+ LN DQ AV KY+
Sbjct: 109 SSAASPSQAYETYIENGLICLKHKIRNIEKKKLKLEDYKDRLKSGEHLNPDQLEAVEKYE 168
Query: 69 EVAQTLEFARDLSKQVTAIAISSXXXXXXXXXXXXWVRYAAETNKIKEVLLILDCLMQMG 128
EV LEFA++L K + +++ ++ AE K++ +L + L +
Sbjct: 169 EVLHNLEFAKELQKTFSGLSLDLLKAQKKAQRREHMLKLEAEKKKLRTILQVQYVLQNLT 228
Query: 129 SADARTDFINGTNGAAKLTEDDLKILDDLYPEVTPKHELNEEGQSGFHLQITRAAEHLYS 188
+ DF G NGA L +L L P E NE Q+ +++ + +
Sbjct: 229 QEHVQKDFKGGLNGAVYLPSKELDYLIKFSKLTCP--ERNE--SLSVEDQMEQSSLYFWD 284
Query: 189 IIDGKPKEVLGTTYLRIKEIVSTVHECGYFD 219
+++G K V+GTTY +K+++S + GYF+
Sbjct: 285 LLEGSEKAVVGTTYKHLKDLLSKLLNSGYFE 315
>AY074490-1|AAL71549.1| 1077|Homo sapiens EEG1L protein.
Length = 1077
Score = 114 bits (275), Expect = 8e-25
Identities = 65/211 (30%), Positives = 108/211 (51%), Gaps = 4/211 (1%)
Query: 9 SEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYD 68
S + S+ +T I + ++HKIRN+EK+K KL Y+D K+G+ LN DQ AV KY+
Sbjct: 109 SSAASPSQAYETYIENGLICLKHKIRNIEKKKLKLEDYKDRLKSGEHLNPDQLEAVEKYE 168
Query: 69 EVAQTLEFARDLSKQVTAIAISSXXXXXXXXXXXXWVRYAAETNKIKEVLLILDCLMQMG 128
EV LEFA++L K + +++ ++ AE K++ +L + L +
Sbjct: 169 EVLHNLEFAKELQKTFSGLSLDLLKAQKKAQRREHMLKLEAEKKKLRTILQVQYVLQNLT 228
Query: 129 SADARTDFINGTNGAAKLTEDDLKILDDLYPEVTPKHELNEEGQSGFHLQITRAAEHLYS 188
+ DF G NGA L +L L P E NE Q+ +++ + +
Sbjct: 229 QEHVQKDFKGGLNGAVYLPSKELDYLIKFSKLTCP--ERNE--SLSVEDQMEQSSLYFWD 284
Query: 189 IIDGKPKEVLGTTYLRIKEIVSTVHECGYFD 219
+++G K V+GTTY +K+++S + GYF+
Sbjct: 285 LLEGSEKAVVGTTYKHLKDLLSKLLNSGYFE 315
>AY074491-1|AAL71550.1| 278|Homo sapiens EEG1S protein.
Length = 278
Score = 90.6 bits (215), Expect = 1e-17
Identities = 48/146 (32%), Positives = 75/146 (51%)
Query: 9 SEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYD 68
S + S+ +T I + ++HKIRN+EK+K KL Y+D K+G+ LN DQ AV KY+
Sbjct: 109 SSAASPSQAYETYIENGLICLKHKIRNIEKKKLKLEDYKDRLKSGEHLNPDQLEAVEKYE 168
Query: 69 EVAQTLEFARDLSKQVTAIAISSXXXXXXXXXXXXWVRYAAETNKIKEVLLILDCLMQMG 128
EV LEFA++L K + +++ ++ AE K++ +L + L +
Sbjct: 169 EVLHNLEFAKELQKTFSGLSLDLLKAQKKAQRREHMLKLEAEKKKLRTILQVQYVLQNLT 228
Query: 129 SADARTDFINGTNGAAKLTEDDLKIL 154
+ DF G NGA L +L L
Sbjct: 229 QEHVQKDFKGGLNGAVYLPSKELDYL 254
>BX537569-1|CAD97786.1| 173|Homo sapiens hypothetical protein
protein.
Length = 173
Score = 69.7 bits (163), Expect = 3e-11
Identities = 33/81 (40%), Positives = 51/81 (62%)
Query: 9 SEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYD 68
S + S+ + I + ++HKIRN+EK+K KL Y+D K+G+ LN DQ AV KY+
Sbjct: 74 SSAASPSQAYEAYIENGLICLKHKIRNIEKKKLKLEDYKDHLKSGEHLNPDQLEAVEKYE 133
Query: 69 EVAQTLEFARDLSKQVTAIAI 89
EV LEFA++L K + +++
Sbjct: 134 EVLHNLEFAKELQKTFSGLSL 154
>U66616-1|AAC50694.1| 1213|Homo sapiens SWI/SNF complex 170 KDa
subunit protein.
Length = 1213
Score = 35.9 bits (79), Expect = 0.42
Identities = 15/28 (53%), Positives = 16/28 (57%)
Query: 326 PVGTPQPPAIPNQVSPPGPIPTQTFTNQ 353
P G PQP A+P V PPGP F NQ
Sbjct: 1027 PAGAPQPGAVPPGVPPPGPHGPSPFPNQ 1054
>BT009924-1|AAP88926.1| 1130|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1130
Score = 35.9 bits (79), Expect = 0.42
Identities = 15/28 (53%), Positives = 16/28 (57%)
Query: 326 PVGTPQPPAIPNQVSPPGPIPTQTFTNQ 353
P G PQP A+P V PPGP F NQ
Sbjct: 1058 PAGAPQPGAVPPGVPPPGPHGPSPFPNQ 1085
>BC026222-1|AAH26222.1| 1214|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1214
Score = 35.9 bits (79), Expect = 0.42
Identities = 15/28 (53%), Positives = 16/28 (57%)
Query: 326 PVGTPQPPAIPNQVSPPGPIPTQTFTNQ 353
P G PQP A+P V PPGP F NQ
Sbjct: 1027 PAGAPQPGAVPPGVPPPGPHGPSPFPNQ 1054
>BC013045-1|AAH13045.1| 1130|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1130
Score = 35.9 bits (79), Expect = 0.42
Identities = 15/28 (53%), Positives = 16/28 (57%)
Query: 326 PVGTPQPPAIPNQVSPPGPIPTQTFTNQ 353
P G PQP A+P V PPGP F NQ
Sbjct: 1058 PAGAPQPGAVPPGVPPPGPHGPSPFPNQ 1085
>BC009067-1|AAH09067.1| 465|Homo sapiens SMARCC2 protein protein.
Length = 465
Score = 35.9 bits (79), Expect = 0.42
Identities = 15/28 (53%), Positives = 16/28 (57%)
Query: 326 PVGTPQPPAIPNQVSPPGPIPTQTFTNQ 353
P G PQP A+P V PPGP F NQ
Sbjct: 278 PAGAPQPGAVPPGVPPPGPHGPSPFPNQ 305
>AB209293-1|BAD92530.1| 1156|Homo sapiens SWI/SNF-related
matrix-associated actin-dependent regulator of chromatin
c2 iso protein.
Length = 1156
Score = 35.9 bits (79), Expect = 0.42
Identities = 15/28 (53%), Positives = 16/28 (57%)
Query: 326 PVGTPQPPAIPNQVSPPGPIPTQTFTNQ 353
P G PQP A+P V PPGP F NQ
Sbjct: 1062 PAGAPQPGAVPPGVPPPGPHGPSPFPNQ 1089
>AB209006-1|BAD92243.1| 1164|Homo sapiens SWI/SNF-related
matrix-associated actin-dependent regulator of chromatin
c2 iso protein.
Length = 1164
Score = 35.9 bits (79), Expect = 0.42
Identities = 15/28 (53%), Positives = 16/28 (57%)
Query: 326 PVGTPQPPAIPNQVSPPGPIPTQTFTNQ 353
P G PQP A+P V PPGP F NQ
Sbjct: 1070 PAGAPQPGAVPPGVPPPGPHGPSPFPNQ 1097
>BC001460-1|AAH01460.2| 1019|Homo sapiens La ribonucleoprotein
domain family, member 1 protein.
Length = 1019
Score = 31.9 bits (69), Expect = 6.9
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 5/30 (16%)
Query: 329 TPQPPAIPNQVSPPGP-----IPTQTFTNQ 353
TP+PP PNQ PPGP +PT N+
Sbjct: 647 TPEPPVDPNQEVPPGPPRFQQVPTDALANK 676
>AK091465-1|BAC03668.1| 816|Homo sapiens protein ( Homo sapiens
cDNA FLJ34146 fis, clone FCBBF3011889, weakly similar to
Drosophila melanogaster La related protein (larp) mRNA.
).
Length = 816
Score = 31.9 bits (69), Expect = 6.9
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 5/30 (16%)
Query: 329 TPQPPAIPNQVSPPGP-----IPTQTFTNQ 353
TP+PP PNQ PPGP +PT N+
Sbjct: 724 TPEPPVDPNQEVPPGPPRFQQVPTDALANK 753
>AB018274-1|BAA34451.1| 1096|Homo sapiens KIAA0731 protein protein.
Length = 1096
Score = 31.9 bits (69), Expect = 6.9
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 5/30 (16%)
Query: 329 TPQPPAIPNQVSPPGP-----IPTQTFTNQ 353
TP+PP PNQ PPGP +PT N+
Sbjct: 724 TPEPPVDPNQEVPPGPPRFQQVPTDALANK 753
>AF010403-1|AAC51734.1| 5262|Homo sapiens ALR protein.
Length = 5262
Score = 31.5 bits (68), Expect = 9.1
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 301 PQQRPITEVIGSQNFFFLQESEIDSPVGTPQPPAIPNQVSPP 342
P++ P++ S F L+ES + P +P PA+ +SPP
Sbjct: 498 PEESPLSPPPESSPFSPLEESPLSPPEESPPSPALETPLSPP 539
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.314 0.132 0.382
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,512,535
Number of Sequences: 224733
Number of extensions: 2774598
Number of successful extensions: 11079
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 11044
Number of HSP's gapped (non-prelim): 31
length of query: 615
length of database: 73,234,838
effective HSP length: 94
effective length of query: 521
effective length of database: 52,109,936
effective search space: 27149276656
effective search space used: 27149276656
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 68 (31.5 bits)
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