GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001166-TA|BGIBMGA001166-PA|IPR002110|Ankyrin,
IPR005821|Ion transport
         (943 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          25   3.2  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    24   5.6  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   7.4  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    23   7.4  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   9.8  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 4/60 (6%)

Query: 107 NIDALAALLEDDRIDVNVKSRGNTAILMAVKQIEE-LDDAREHELTIYE---DMIELLLK 162
           N+D L  + E D I ++  +R N   ++A++Q +E L    + E  + +   D+IE++ K
Sbjct: 320 NLDVLVDMCEQDIIRIDRNTRFNQDKIVALRQEQETLKSQVQRESDVVDSLKDVIEIVDK 379


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 12/45 (26%), Positives = 20/45 (44%)

Query: 232 TTQDPEIVDSDKLFSYLSRHEEDNFIRDFLKLANKNEHRKILPVN 276
           TT+DP  V  D+   ++S H +    R +     + +H    P N
Sbjct: 906 TTKDPNEVTCDEEEGHISYHPDKADCRMYYMCEGERKHHMPCPSN 950


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)

Query: 640 LLSSAELVLLIGQFPTLSTNIVMLKTVSWNFF-KFLLWYCILIIAFA 685
           LL  + L++    F  L+   VML T+S +F  + +L+   LI AF+
Sbjct: 142 LLKRSYLIISFVLFSLLARVPVMLMTISADFIQQIMLFVSALIKAFS 188


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)

Query: 640 LLSSAELVLLIGQFPTLSTNIVMLKTVSWNFF-KFLLWYCILIIAFA 685
           LL  + L++    F  L+   VML T+S +F  + +L+   LI AF+
Sbjct: 142 LLKRSYLIISFVLFSLLARVPVMLMTISADFIQQIMLFVSALIKAFS 188


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 11/31 (35%), Positives = 20/31 (64%), Gaps = 1/31 (3%)

Query: 124 VKSRGNTAILMAVKQIEELDDAREHELTIYE 154
           + +  NT++L A  Q+EEL + +  +LT+ E
Sbjct: 525 ITTLSNTSLLGAANQLEEL-NLKNIDLTVLE 554


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.135    0.390 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,858
Number of Sequences: 317
Number of extensions: 9287
Number of successful extensions: 19
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 17
Number of HSP's gapped (non-prelim): 7
length of query: 943
length of database: 114,650
effective HSP length: 63
effective length of query: 880
effective length of database: 94,679
effective search space: 83317520
effective search space used: 83317520
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 47 (23.0 bits)