GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001166-TA|BGIBMGA001166-PA|IPR002110|Ankyrin,
IPR005821|Ion transport
         (943 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          36   0.007
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    28   1.00 
AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate phospho...    26   4.0  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            26   4.0  
AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    26   4.0  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    26   4.0  
AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.    26   5.3  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    25   7.0  

>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 35.5 bits (78), Expect = 0.007
 Identities = 26/102 (25%), Positives = 53/102 (51%), Gaps = 4/102 (3%)

Query: 28  LNKALQNNDYAKFKKLVTEANVDLEHVYEYPDYKTCLEVAVSDRNKLEFVKLLLQYQVEV 87
           L++A+  N     + L+ +  + L+   +  D  T L+ AV  RN L+  ++LL+    V
Sbjct: 821 LHRAVVENVPDMVRLLLLQGGLRLDCTND--DGLTALQAAVYARN-LKITRILLEAGASV 877

Query: 88  NKVNVTHSAAPIHFAVENGNIDALAALLEDDRIDVNVKSRGN 129
            + ++ H    +H AV+N  +D +  +LE+ + ++  + R N
Sbjct: 878 REKDLKHGNNILHIAVDNDALDIVHYILEEVKEELG-RERNN 918


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 28.3 bits (60), Expect = 1.00
 Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 2/68 (2%)

Query: 71  RNKLEFVKLLLQYQVEVNKVN-VTHSAAPIHFAVENGNIDALAALLEDDRIDVN-VKSRG 128
           + KL   K   Q Q +++K+  +      +  AVE+G+++    +LE   +DVN + S G
Sbjct: 402 QKKLPTKKQHKQLQAQLDKLTQINIHLHALFSAVEHGHLEKARTILESTDVDVNSLNSDG 461

Query: 129 NTAILMAV 136
            T + +AV
Sbjct: 462 LTPLDVAV 469


>AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate
           phosphoribosyltransferase-like protein protein.
          Length = 519

 Score = 26.2 bits (55), Expect = 4.0
 Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 8/60 (13%)

Query: 242 DKLFSYLSRHEEDNFIRDFLKLANKNEHRKILPVNNGMNTMLQLATEKGFEKAVSTLLRY 301
           D+L + L +H+ED   RD L+LA   EHR  +       ++L ++T++  E  ++ ++ +
Sbjct: 199 DELKTRLLQHKEDGTTRDLLELA--MEHRAAIA------SVLDVSTDESSEGELAAMVSF 250


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 26.2 bits (55), Expect = 4.0
 Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 4/38 (10%)

Query: 464  FLVYPNNSLENELCK--VPLIDNTNNNVKEYDTILAPE 499
            FLVY +NS  + LC   +PL +  N N+    TIL+P+
Sbjct: 988  FLVYYDNS--STLCTGAIPLENVINGNLTSRKTILSPQ 1023


>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 26.2 bits (55), Expect = 4.0
 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)

Query: 218 LKEAFPYLEAKFDSTTQDPEIVDSDKLFSYLSRHEEDNFIR 258
           L E  PY   K+     D   V  D ++SY   H+++NF+R
Sbjct: 319 LNEITPY--DKYPEGPADDRQVFVDLVYSYNMAHDKNNFVR 357


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 26.2 bits (55), Expect = 4.0
 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)

Query: 218 LKEAFPYLEAKFDSTTQDPEIVDSDKLFSYLSRHEEDNFIR 258
           L E  PY   K+     D   V  D ++SY   H+++NF+R
Sbjct: 319 LNEITPY--DKYPEGPADDRQVFVDLVYSYNMAHDKNNFVR 357


>AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.
          Length = 332

 Score = 25.8 bits (54), Expect = 5.3
 Identities = 10/34 (29%), Positives = 19/34 (55%)

Query: 834 TFFTKSFAKRICLFPHFLPKYKILVKPNQNNIIE 867
           TF +  F +R+  F   + K + L+K N+  ++E
Sbjct: 282 TFLSSKFTRRVDKFEKCVVKRRQLMKQNEREVVE 315


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 25.4 bits (53), Expect = 7.0
 Identities = 22/94 (23%), Positives = 39/94 (41%), Gaps = 1/94 (1%)

Query: 181 AAKQGLERVITLIID-YAKHAIDIDTYKDRRGKTARDYLKEAFPYLEAKFDSTTQDPEIV 239
           +AK+  E  +   +D +AK   ++    +RR KT      E    LE +        EI 
Sbjct: 369 SAKESKESTLKNSLDKFAKVQANMRATNERRKKTLEQIAAEEKRLLELQDVPKKNKKEIE 428

Query: 240 DSDKLFSYLSRHEEDNFIRDFLKLANKNEHRKIL 273
           +S+     L+R + +   +    LA   +  K+L
Sbjct: 429 ESEAKIESLTRQKTEVEAKLTANLATLKDETKVL 462


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.135    0.390 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 905,664
Number of Sequences: 2123
Number of extensions: 36987
Number of successful extensions: 107
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 102
Number of HSP's gapped (non-prelim): 10
length of query: 943
length of database: 516,269
effective HSP length: 70
effective length of query: 873
effective length of database: 367,659
effective search space: 320966307
effective search space used: 320966307
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 52 (25.0 bits)