Silkworm BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001165-TA|BGIBMGA001165-PA|IPR001401|Dynamin,
IPR000375|Dynamin central region, IPR003130|Dynamin GTPase effector
         (612 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ304412-1|CAC39105.1|  196|Anopheles gambiae dynamin protein.         73   3e-14
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    28   0.83 
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           27   1.5  
AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.    25   5.9  

>AJ304412-1|CAC39105.1|  196|Anopheles gambiae dynamin protein.
          Length = 196

 Score = 72.5 bits (170), Expect = 3e-14
 Identities = 35/92 (38%), Positives = 55/92 (59%)

Query: 515 QLNQMGDLVERLIKSYFYIVRKSIQDSVPKAVMHFLVNFVKDNLQSELVTHLYKSDQAES 574
           QL +  + +  L++SY  IV K+ +D VPKA+M  ++N  KD +  EL+ HLY +    S
Sbjct: 93  QLERQVETIRNLVESYMRIVTKTTRDMVPKAIMMLIINNTKDFINGELLAHLYATGDQAS 152

Query: 575 MLNESEHIAQRRKEAADMLKALQRAGQIISEI 606
           M+ ES   AQ+R+E   M  A + A +II ++
Sbjct: 153 MMEESADEAQKREEMLRMYHACKEALRIIGDV 184


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 27.9 bits (59), Expect = 0.83
 Identities = 19/69 (27%), Positives = 31/69 (44%)

Query: 66  QLVYSPQEGKEHRSAEEGTLNLEEWGKFLHTKDKIYTNFEEIRQEIERETDRMAGSNKGI 125
           QLV   +  K  R   EG    E +    H +    ++     Q+   E++  AGS   I
Sbjct: 85  QLVQGRELTKPSRRVLEGQSERESYYSSSHYQSSSSSSSSSSFQQSSYESESGAGSIVQI 144

Query: 126 SPEPINLKI 134
           SP+ ++LK+
Sbjct: 145 SPQRVSLKL 153


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 27.1 bits (57), Expect = 1.5
 Identities = 14/43 (32%), Positives = 21/43 (48%)

Query: 348 QRIVDVVTQLLRTRLPPTNSMVENLVAIELAYINTKHPDFHRE 390
           ++I D VT+LLR    P  S    L ++  + I    P +H E
Sbjct: 822 RKIADAVTRLLRNHSGPKTSKARLLASVAESVIRYAAPIWHGE 864


>AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.
          Length = 406

 Score = 25.0 bits (52), Expect = 5.9
 Identities = 9/17 (52%), Positives = 12/17 (70%)

Query: 89  EWGKFLHTKDKIYTNFE 105
           E+GKF+HT  K Y + E
Sbjct: 42  EYGKFVHTAGKFYNDAE 58


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.134    0.376 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 581,952
Number of Sequences: 2123
Number of extensions: 23783
Number of successful extensions: 53
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 48
Number of HSP's gapped (non-prelim): 5
length of query: 612
length of database: 516,269
effective HSP length: 68
effective length of query: 544
effective length of database: 371,905
effective search space: 202316320
effective search space used: 202316320
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 51 (24.6 bits)