Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001164-TA|BGIBMGA001164-PA|IPR004272|Odorant binding
protein, IPR013053|Hormone binding
         (248 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   3.8  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   5.1  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/30 (33%), Positives = 15/30 (50%)

Query: 31  FSNENLEQCIKEQIEKSLPEFTKGIPELDV 60
           F NENL + +K+ +      F  G+  L V
Sbjct: 455 FKNENLSEMVKQFLFTQKFTFVAGLATLSV 484


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 139 DALINCVNVDVEIESKLNQVKDNNGKDHLKLGTPSYKYK 177
           DA+     V + ++  LN+V+    K HLK    S K +
Sbjct: 482 DAIEKPAPVKISVQEVLNRVRKPTKKLHLKNSPISKKVR 520


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.317    0.136    0.391 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,793
Number of Sequences: 317
Number of extensions: 2723
Number of successful extensions: 5
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 2
length of query: 248
length of database: 114,650
effective HSP length: 55
effective length of query: 193
effective length of database: 97,215
effective search space: 18762495
effective search space used: 18762495
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 42 (21.0 bits)