Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001164-TA|BGIBMGA001164-PA|IPR004272|Odorant binding
protein, IPR013053|Hormone binding
(248 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0102 + 20112731-20112928,20113314-20113514,20113606-201136... 30 1.5
04_03_0463 - 16200690-16200986,16202010-16202258,16202562-162026... 30 2.0
07_03_0853 - 22024907-22024944,22025327-22025600 29 3.5
07_03_1530 + 27502546-27502671,27503487-27503561,27504670-275047... 28 6.2
02_02_0354 + 9283886-9285505,9287158-9287251,9287817-9289915 28 6.2
02_01_0175 - 1198657-1198737,1199080-1199190,1199488-1199540,120... 28 6.2
11_08_0007 + 27551173-27551828,27552071-27552282,27553371-275535... 28 8.2
11_04_0332 + 16465360-16465769,16465873-16466272,16466379-164664... 28 8.2
06_03_0588 + 22567820-22570802,22570917-22571269 28 8.2
>11_06_0102 +
20112731-20112928,20113314-20113514,20113606-20113695,
20114269-20114457,20115375-20115387,20115824-20115990,
20117334-20117522,20118940-20119053,20120912-20121010,
20122368-20122490,20122579-20122701,20123179-20123277,
20124786-20124842,20125136-20125182,20125296-20125439,
20125540-20125717,20126318-20126398,20126480-20126563,
20126624-20126629
Length = 733
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 170 GTPSYKYKIEKTTFDLKNLFNGNKELADTTL--QFANENWQQLMDDLAPPAIKQI 222
GTP + +E+ D + E AD + QFA EN Q D PPA+ ++
Sbjct: 33 GTPEDRANVERVRRDFTDHRLRRPESADLLMRMQFARENNHQRRGDRIPPAVNKL 87
>04_03_0463 -
16200690-16200986,16202010-16202258,16202562-16202697,
16203150-16203368,16204137-16204515,16205010-16205253
Length = 507
Score = 29.9 bits (64), Expect = 2.0
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 11/120 (9%)
Query: 26 IEACEFSNENLEQCIKEQIEKSLPEFTKGIPE--LDVPSTDPVHLDDINIDGNGLKLTFT 83
I+ C NE +++ E LPE+ K L +H++D DG ++ T
Sbjct: 269 IQECRKLNEAIQRW-DESATAFLPEYIKKFYSALLKTFKEFEIHVED---DGQ-YRIDHT 323
Query: 84 KALMHGLKGSHLKEFKLKFDGDHGNFKLAFISNMSLTAEYEADGKLLILQIKGKGDALIN 143
K L +L+E + + N+K +F ++L+ L + G+GDAL N
Sbjct: 324 KKAFQNLSAYYLQEAEWSYQ----NYKPSFEEQVALSTVTSTVPLLCVSTTVGRGDALTN 379
>07_03_0853 - 22024907-22024944,22025327-22025600
Length = 103
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 5/38 (13%)
Query: 42 EQIEKSLPEFTKGIPELDVPSTDPVHLDDINID-GNGL 78
EQI++ + E T IP+ D TDPV +D ++D G+GL
Sbjct: 34 EQIDEEVQEVT--IPDAD--GTDPVEVDSASVDLGHGL 67
>07_03_1530 +
27502546-27502671,27503487-27503561,27504670-27504746,
27505576-27507522,27508478-27508946,27509898-27510079,
27510746-27511208,27511295-27511691,27511810-27511937,
27512106-27512273,27512452-27512559,27512830-27512838
Length = 1382
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 106 HGNFKLAFISNMSLTAEYEADGKLLILQIKGKGDALINCVNVDVEIESKLNQVKDNNGKD 165
+G ++AF + L A E K L+ + GKG + V VEI L ++NN D
Sbjct: 88 YGTKQIAFCNYTDLEAFTEEKRKSLLAKRHGKGADFVRAVKEIVEIYDSLKN-ENNNKSD 146
>02_02_0354 + 9283886-9285505,9287158-9287251,9287817-9289915
Length = 1270
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 8 FAAHVFNTNADDAYLPPYIEACEFSNENLEQCIKEQIEKSLP 49
FA H++N DAY P + C +N ++ + + ++I K +P
Sbjct: 259 FAQHLYNDKRTDAYFPIKVWVCVSTNFDVLR-LTQEILKCIP 299
>02_01_0175 -
1198657-1198737,1199080-1199190,1199488-1199540,
1200131-1200215,1200519-1200614,1200729-1200821,
1201640-1201696,1201826-1201975,1202819-1202893
Length = 266
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 4/34 (11%)
Query: 172 PSYKYKIEKTTF----DLKNLFNGNKELADTTLQ 201
P YK+K+E+T F + + FNG +++ +LQ
Sbjct: 187 PEYKFKVERTNFFPQPKVNSAFNGKRKMLRKSLQ 220
>11_08_0007 +
27551173-27551828,27552071-27552282,27553371-27553550,
27555154-27556187
Length = 693
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 15 TNADDAYLPPYIEACEFSNENLEQCIKEQIEKSLPEFTKGIPEL 58
++ADDA P Y+E + +C+KE I++ P + + EL
Sbjct: 641 SSADDALRPRYMECLDRMANIAIRCLKEDIDER-PTMAEALEEL 683
>11_04_0332 +
16465360-16465769,16465873-16466272,16466379-16466423,
16467113-16467139,16467201-16467266,16467889-16467950,
16468049-16468123,16468218-16468383,16468611-16468734,
16469737-16469843,16469992-16470102
Length = 530
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/46 (28%), Positives = 25/46 (54%)
Query: 149 VEIESKLNQVKDNNGKDHLKLGTPSYKYKIEKTTFDLKNLFNGNKE 194
V + + + D+NGK+ G S K++ E +F K +F+ ++E
Sbjct: 193 VRVRKTMAETHDSNGKESANDGIKSDKFETENFSFLPKLIFDRHEE 238
>06_03_0588 + 22567820-22570802,22570917-22571269
Length = 1111
Score = 27.9 bits (59), Expect = 8.2
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Query: 66 VHLDDINIDGNGLKLTFTKALMHGLKGSHLKEFKLKFDGDHGNFKLAFISNMSLTAEYEA 125
V L+++N+DGN L + +++ H + LK L + HG + SL+ +
Sbjct: 537 VQLNELNLDGNNLSGSIPESIHH---CAQLKTLNLAHNSLHGTIPVHIFKIFSLSEHLDL 593
Query: 126 DGKLLILQIKGKGDALIN 143
L I + LIN
Sbjct: 594 SHNYLSGGIPQEVGNLIN 611
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.136 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,274,079
Number of Sequences: 37544
Number of extensions: 306816
Number of successful extensions: 683
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 682
Number of HSP's gapped (non-prelim): 9
length of query: 248
length of database: 14,793,348
effective HSP length: 80
effective length of query: 168
effective length of database: 11,789,828
effective search space: 1980691104
effective search space used: 1980691104
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 59 (27.9 bits)
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