Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001163-TA|BGIBMGA001163-PA|IPR002290|Serine/threonine
protein kinase, IPR000961|Protein kinase, C-terminal,
IPR000719|Protein kinase, IPR008271|Serine/threonine protein kinase,
active site, IPR011009|Protein kinase-like
         (366 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    47   2e-07
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   3.5  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   3.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.1  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   6.1  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   6.1  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   6.1  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 46.8 bits (106), Expect = 2e-07
 Identities = 33/124 (26%), Positives = 62/124 (50%), Gaps = 7/124 (5%)

Query: 165 QVILALEYLHACELVYRDLKPENILIDRTGYIKITDFGFCK-LIRGRTWTLCG----TPE 219
           QV L +E+L    +V+RDL   N+L+     +K++DFG  + + +   +   G       
Sbjct: 600 QVALGMEHLAKTRVVHRDLAARNVLVCENHTVKVSDFGLSRDVYQDNVYCKNGGGKLPVR 659

Query: 220 YLAPEIILSKGYGMSVDWWSLGVLLFE-MSAGHPPFFASDPMRIYEKIVAG-KYRCPSHF 277
           ++A E +  + Y    D WS GVLL+E ++ G  P+       + + + +G +   P++ 
Sbjct: 660 WMALESLTHQRYTTYSDVWSFGVLLWEIVTLGGTPYVGVHSSELLDFLKSGNRLARPANC 719

Query: 278 SVEL 281
           S +L
Sbjct: 720 SPDL 723



 Score = 21.8 bits (44), Expect = 8.0
 Identities = 9/12 (75%), Positives = 10/12 (83%)

Query: 62  QKVLGTGAFGIV 73
           Q V+G GAFGIV
Sbjct: 454 QGVIGEGAFGIV 465


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 10/28 (35%), Positives = 15/28 (53%)

Query: 273 CPSHFSVELKDIIGHVLQVDTTRRYGTL 300
           C  HF++EL  ++G   QV T     T+
Sbjct: 121 CYYHFTLELYTVLGAACQVCTPNATNTV 148


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 10/28 (35%), Positives = 15/28 (53%)

Query: 273 CPSHFSVELKDIIGHVLQVDTTRRYGTL 300
           C  HF++EL  ++G   QV T     T+
Sbjct: 121 CYYHFTLELYTVLGAACQVCTPNATNTV 148


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 10/39 (25%), Positives = 16/39 (41%)

Query: 18   IQHGGYSPAKQEQYSQYLKKLRQDFVESWDDKSESNAKL 56
            +   GY      QY  ++  +  DF   WD ++   A L
Sbjct: 2491 VMDAGYDVPALSQYLDWIAVMTYDFHGHWDKQTGHVAPL 2529


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 9/35 (25%), Positives = 15/35 (42%)

Query: 22  GYSPAKQEQYSQYLKKLRQDFVESWDDKSESNAKL 56
           GY       Y  ++  +  DF   W+ ++  NA L
Sbjct: 261 GYDVPAVSSYLDFINLMAYDFHGKWERETGHNAPL 295


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 10/30 (33%), Positives = 16/30 (53%)

Query: 106 YEKKILCGLNFPFVVYMKYYFKDNVYLYYV 135
           +E  +L  ++  F VY+  Y    V+L YV
Sbjct: 127 HETNLLRNVSVQFFVYVILYILATVFLAYV 156


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 10/30 (33%), Positives = 16/30 (53%)

Query: 106 YEKKILCGLNFPFVVYMKYYFKDNVYLYYV 135
           +E  +L  ++  F VY+  Y    V+L YV
Sbjct: 127 HETNLLRNVSVQFFVYVILYILATVFLAYV 156


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.323    0.142    0.442 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,370
Number of Sequences: 317
Number of extensions: 4498
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 8
length of query: 366
length of database: 114,650
effective HSP length: 58
effective length of query: 308
effective length of database: 96,264
effective search space: 29649312
effective search space used: 29649312
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 44 (21.8 bits)