GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001161-TA|BGIBMGA001161-PA|undefined
         (119 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060341-1|AAL25380.1|  443|Drosophila melanogaster GH23825p pro...    28   3.7  
AL023893-4|CAA19654.1|  443|Drosophila melanogaster EG:132E8.4 p...    28   3.7  
AE014298-202|AAF45619.1|  443|Drosophila melanogaster CG11448-PA...    28   3.7  

>AY060341-1|AAL25380.1|  443|Drosophila melanogaster GH23825p
           protein.
          Length = 443

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 12/32 (37%), Positives = 15/32 (46%)

Query: 9   ESSKVASVDRGEVPAAGEVPAAGEVPAAGEVP 40
           E    A  +  E PAAGE P   + P  G +P
Sbjct: 351 EEEAAAEANELEPPAAGETPPGHDAPVQGPLP 382


>AL023893-4|CAA19654.1|  443|Drosophila melanogaster EG:132E8.4
           protein.
          Length = 443

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 12/32 (37%), Positives = 15/32 (46%)

Query: 9   ESSKVASVDRGEVPAAGEVPAAGEVPAAGEVP 40
           E    A  +  E PAAGE P   + P  G +P
Sbjct: 351 EEEAAAEANELEPPAAGETPPGHDAPVQGPLP 382


>AE014298-202|AAF45619.1|  443|Drosophila melanogaster CG11448-PA
           protein.
          Length = 443

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 12/32 (37%), Positives = 15/32 (46%)

Query: 9   ESSKVASVDRGEVPAAGEVPAAGEVPAAGEVP 40
           E    A  +  E PAAGE P   + P  G +P
Sbjct: 351 EEEAAAEANELEPPAAGETPPGHDAPVQGPLP 382


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.308    0.124    0.341 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,971,338
Number of Sequences: 52641
Number of extensions: 62344
Number of successful extensions: 212
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 206
Number of HSP's gapped (non-prelim): 3
length of query: 119
length of database: 24,830,863
effective HSP length: 76
effective length of query: 43
effective length of database: 20,830,147
effective search space: 895696321
effective search space used: 895696321
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 56 (26.6 bits)