Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001160-TA|BGIBMGA001160-PA|IPR003010|Nitrilase/cyanide
hydratase and apolipoprotein N-acyltransferase, IPR003694|NAD+
synthase
(697 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL022716-4|CAA18773.1| 703|Caenorhabditis elegans Hypothetical ... 613 e-175
L16679-1|AAA28092.5| 2104|Caenorhabditis elegans Muscle position... 31 3.6
AF289202-1|AAK69172.1| 2104|Caenorhabditis elegans transmembrane... 31 3.6
U64858-6|AAB18283.2| 392|Caenorhabditis elegans Hypothetical pr... 30 6.4
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr... 29 8.4
AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical ... 29 8.4
>AL022716-4|CAA18773.1| 703|Caenorhabditis elegans Hypothetical
protein C24F3.4 protein.
Length = 703
Score = 613 bits (1514), Expect = e-175
Identities = 319/695 (45%), Positives = 433/695 (62%), Gaps = 11/695 (1%)
Query: 3 RKVTVAVCTLNQWALDFEGNLNRILQSIQEAKELGALYRTGPELEICGYSCEDHFHESDT 62
R+ VA CT+N WALDF+GN RI+++ +EA LGA R GPELEI GY C DHF E DT
Sbjct: 6 RRCRVATCTVNNWALDFKGNYERIVKTCEEAAALGARIRLGPELEIPGYGCADHFFELDT 65
Query: 63 YLHSWQVLVELL-KSPTCKDILIDVGMPVQHRNVSYNCRVAFFNRKIILIRPKMILCDDG 121
HSW++L +L+ KS ++L+ G+P + R + YNC A N K++ IR KM L DD
Sbjct: 66 ERHSWEMLSKLVEKSKKWPNLLVVTGLPTRFRGLLYNCAAALRNGKLLFIRAKMGLADDN 125
Query: 122 NYRETRWFSCWTKDRQVEDFYLPRMITAVTNQSTVPIGDAVISTRDTC-IGFEICEELWN 180
YRE+RWF WT+ + + +P +Q TVP GD ++ + D IGFEICEELW+
Sbjct: 126 VYRESRWFVKWTET--FKHYQMPLNSDIHFDQETVPFGDGILESSDNVRIGFEICEELWS 183
Query: 181 PQSRHIPLSLDGVEIISNGSGSYMELRKAYVTVD-LVKSATFKSGGAYLFSNLRGCDGQR 239
+S ++ L+ GV+I+ NGSGS+ L K+ ++ L+ ++ K GG YL++N RGCDG R
Sbjct: 184 ARSTNVRLAEQGVDIMCNGSGSHHILGKSNYRINQLILGSSAKVGGVYLYANQRGCDGDR 243
Query: 240 IYFNGCSCVAVNGEIVSRGQQFGLIDVEVTTATIDLEDIRSYRAKNRSRCHLAASNKPFP 299
+Y++G S VA NG+++++ QF + D V +A +DL D + +R S A+
Sbjct: 244 VYYDGASSVAQNGDLLAQIHQFDIEDTSVVSAVVDLSDNQCFRHMKSSDRGNASDQVTVV 303
Query: 300 RIFVDVSLSDDEDIHLTTNPPI---QWHYLSPEEEISLGPACWLWDYLRRSGQGGFFLPL 356
I D ++ + + PI + LSP E+ GP +LW YLRRSG G+F+PL
Sbjct: 304 PIRFDGKMTGGIKYNEKSTAPIHNVEDLQLSPIAELCHGPPAYLWTYLRRSGMAGYFIPL 363
Query: 357 SGGVDSSSTACIVFSMCTQICEAIKKGESQVLYDVRKIMCQPDYTPSDPMELCNKLLVTC 416
SGG DSS+ A +V MC ++C AIK+ D DP ELCN++L TC
Sbjct: 364 SGGQDSSAVAAMVRLMCEKVCGAIKRRRETDGGDDPAYYLGGKKVGEDPAELCNQVLFTC 423
Query: 417 YMASENSSRETKQRASQLASQIGSYHFPILIDTAVNAALGIFTAATGLLPIFKSKGGCPR 476
YMASE+SS ET+Q A LA + S H I IDT V + L +F A G +P F+S R
Sbjct: 424 YMASEHSSDETRQCAEGLAKNVNSSHCGIFIDTIVTSILKVFNVAYGFMPSFQSPDN--R 481
Query: 477 QNLALQNIQARIRMVLSYLFAQLMXXXXXXXXXXXXXXSSNVDEALRGYMTKYDCSSADI 536
+ +ALQNIQARIRMVLSYLFAQL ++NVDE+L GY+TKYDCSSADI
Sbjct: 482 ETMALQNIQARIRMVLSYLFAQLALVSHKRPGGLLVLGTANVDESLVGYLTKYDCSSADI 541
Query: 537 NPIGGISKTDLKSFLHYAKNRFFLPSLSEILEAPPTAELEPLADGQITQTDEQDMGMTYA 596
NPIG +SK DL+ FL A ++ + +L ++++ PTAEL+PL DG++ QTDE ++G+TY
Sbjct: 542 NPIGSVSKRDLRQFLEIAYEKYGMAALRCVIDSTPTAELKPLVDGKVAQTDEAEIGLTYD 601
Query: 597 ELSEFGTLRKTYKCGPYSMFEKLVHKWSDKCTPKEVAEKVKHFFRCYAINRHKMTVLTPS 656
ELS G LRK GPY MF KL+ W DK + E+ EKV FF Y +NRHK TV TP+
Sbjct: 602 ELSVIGRLRKPGGMGPYGMFLKLLQLWGDKYSIDEIEEKVNKFFWRYRVNRHKATVSTPA 661
Query: 657 YHAETYSPDDNRFDLRPFLYRVHWNWQFKTIDDAV 691
HAE YSPDD+R D RPFLY +++QF+ I + V
Sbjct: 662 IHAENYSPDDHRNDHRPFLY-PDFSYQFERIREKV 695
>L16679-1|AAA28092.5| 2104|Caenorhabditis elegans Muscle positioning
protein 4 protein.
Length = 2104
Score = 30.7 bits (66), Expect = 3.6
Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 6/75 (8%)
Query: 358 GGVDSSSTACIVFSMCTQICEAIKKGESQVLYDVRKIMCQPDY--TPSDPMEL----CNK 411
G V S+ C VFS C Q E + YD K C+ + DP+ L C +
Sbjct: 267 GSVQQSNGVCKVFSQCEQANECDRNAFCSNTYDGPKCQCKDGFLDVSPDPVRLPGRKCQQ 326
Query: 412 LLVTCYMASENSSRE 426
+ C S + S +
Sbjct: 327 VRNECADGSHDCSHQ 341
>AF289202-1|AAK69172.1| 2104|Caenorhabditis elegans transmembrane
matrix receptor MUP-4 protein.
Length = 2104
Score = 30.7 bits (66), Expect = 3.6
Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 6/75 (8%)
Query: 358 GGVDSSSTACIVFSMCTQICEAIKKGESQVLYDVRKIMCQPDY--TPSDPMEL----CNK 411
G V S+ C VFS C Q E + YD K C+ + DP+ L C +
Sbjct: 267 GSVQQSNGVCKVFSQCEQANECDRNAFCSNTYDGPKCQCKDGFLDVSPDPVRLPGRKCQQ 326
Query: 412 LLVTCYMASENSSRE 426
+ C S + S +
Sbjct: 327 VRNECADGSHDCSHQ 341
>U64858-6|AAB18283.2| 392|Caenorhabditis elegans Hypothetical
protein C16D9.5 protein.
Length = 392
Score = 29.9 bits (64), Expect = 6.4
Identities = 13/50 (26%), Positives = 25/50 (50%)
Query: 570 PPTAELEPLADGQITQTDEQDMGMTYAELSEFGTLRKTYKCGPYSMFEKL 619
PP A++EP+ I++T + Y + ++ K + C ++ EKL
Sbjct: 73 PPAAKVEPVDCNCISKTTGKSYNFCYTDPQNSTSIGKKFDCASLTILEKL 122
>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
presynaptic morphologyprotein 1 protein.
Length = 3766
Score = 29.5 bits (63), Expect = 8.4
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Query: 211 VTVDLVKSA-TFKSGGAYLFSNLRGCDGQRIYFNGCSCVAVNGEIVSRGQ 259
V V+++K+ TF G +L +G R++F+GCS ++ NG V RGQ
Sbjct: 1602 VKVNMMKNTKTFCGEGGVTQVHL--LNGARLFFSGCS-MSQNGTTVQRGQ 1648
>AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical
protein F07B7.12 protein.
Length = 1900
Score = 29.5 bits (63), Expect = 8.4
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Query: 211 VTVDLVKSA-TFKSGGAYLFSNLRGCDGQRIYFNGCSCVAVNGEIVSRGQ 259
V V+++K+ TF G +L +G R++F+GCS ++ NG V RGQ
Sbjct: 1538 VKVNMMKNTKTFCGEGGVTQVHL--LNGARLFFSGCS-MSQNGTTVQRGQ 1584
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.322 0.136 0.425
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,660,679
Number of Sequences: 27539
Number of extensions: 763829
Number of successful extensions: 1484
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1473
Number of HSP's gapped (non-prelim): 6
length of query: 697
length of database: 12,573,161
effective HSP length: 86
effective length of query: 611
effective length of database: 10,204,807
effective search space: 6235137077
effective search space used: 6235137077
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 63 (29.5 bits)
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