GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001159-TA|BGIBMGA001159-PA|IPR007261|Vacuolar protein
sorting 36
         (401 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    23   3.9  
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    22   6.8  

>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory
          receptor candidate 35 protein.
          Length = 251

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 7/19 (36%), Positives = 15/19 (78%)

Query: 59 LVCLSLHLYYVFCLEEESG 77
          ++ +SL +Y+++ + EESG
Sbjct: 15 IIFVSLEIYHIYTVVEESG 33


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 12/55 (21%), Positives = 26/55 (47%)

Query: 176 RSIEEQHRATDQSISVAFQDLTKLMEKAKEMVSLSKNISTKIREKQGDISEDDTV 230
           + ++++H+   ++   A Q L + +EKAK  +S     +  I     D    +T+
Sbjct: 70  KMVKQKHKKDIRADKKALQKLRREVEKAKRDLSSVHKTTLTIENLLADYDFSETL 124


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.137    0.397 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,418
Number of Sequences: 317
Number of extensions: 3572
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 2
length of query: 401
length of database: 114,650
effective HSP length: 58
effective length of query: 343
effective length of database: 96,264
effective search space: 33018552
effective search space used: 33018552
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 44 (21.8 bits)