Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001159-TA|BGIBMGA001159-PA|IPR007261|Vacuolar protein
sorting 36
(401 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC050439-1|AAH50439.1| 386|Homo sapiens vacuolar protein sortin... 353 5e-97
BC037279-1|AAH37279.1| 386|Homo sapiens vacuolar protein sortin... 353 5e-97
AL359513-3|CAH71658.1| 386|Homo sapiens vacuolar protein sortin... 353 5e-97
AF151903-1|AAD34140.1| 386|Homo sapiens CGI-145 protein protein. 351 2e-96
AK023182-1|BAB14451.1| 261|Homo sapiens protein ( Homo sapiens ... 274 3e-73
AB208956-1|BAD92193.1| 224|Homo sapiens Hypothetical protein FL... 247 5e-65
BC038830-1|AAH38830.1| 257|Homo sapiens SNF8, ESCRT-II complex ... 49 3e-05
BC008976-1|AAH08976.1| 258|Homo sapiens SNF8, ESCRT-II complex ... 45 4e-04
AF156102-1|AAD46560.1| 258|Homo sapiens ELL complex EAP30 subun... 45 4e-04
U33822-1|AAC52059.1| 803|Homo sapiens TXBP181 protein. 31 9.5
>BC050439-1|AAH50439.1| 386|Homo sapiens vacuolar protein sorting
36 homolog (S. cerevisiae) protein.
Length = 386
Score = 353 bits (869), Expect = 5e-97
Identities = 179/402 (44%), Positives = 267/402 (66%), Gaps = 17/402 (4%)
Query: 1 MDRFEYIEARLFDGENYLKRDKNVKIYDGDDKTQFIDGEVLLTTHRLLWGKPGDIPKGLV 60
MDRF + L E + + + V+IYDG++K +F G +LL+THRL+W D
Sbjct: 1 MDRFVWTSGLLEINETLVIQQRGVRIYDGEEKIKFDAGTLLLSTHRLIWR---DQKNHEC 57
Query: 61 CLSLHLYYVFCLEEESGGVFGLGGPKRIIMHLGPALPGKRPGPAVVSPFHYVKLSFKDGV 120
C+++ L + +EE++ G+ G +I++HL PA P K PGP S Y+KLSFK+
Sbjct: 58 CMAILLSQIVFIEEQAAGI---GKSAKIVVHLHPAPPNKEPGPFQSSKNSYIKLSFKEHG 114
Query: 121 DTAFYKALSDAVAAKAWERQTPIDXXXXXXXXXXXXXXXXXXXNSKIRS-GIVGIERSIE 179
FY+ LS+ + + WE P+ +IR+ GIVGIER +E
Sbjct: 115 QIEFYRRLSEEMTQRRWENM-PVSQSLQTNRGPQP---------GRIRAVGIVGIERKLE 164
Query: 180 EQHRATDQSISVAFQDLTKLMEKAKEMVSLSKNISTKIREKQGDISEDDTVRFKSYLMSL 239
E+ + TD++IS AF+DL+KLM KAKEMV LSK+I+ KI++KQGDI+ED+T+RFKSYL+S+
Sbjct: 165 EKRKETDKNISEAFEDLSKLMIKAKEMVELSKSIANKIKDKQGDITEDETIRFKSYLLSM 224
Query: 240 GIDDPVTRDAFRSDSEYYLGLAQQVSDMMVAVLLECGGIMSLADVWCRVNRARGLELVSP 299
GI +PVTR+ + S ++Y++ LA+Q++ ++ L E GGIMSL +V+C VNRARG+EL+SP
Sbjct: 225 GIANPVTRETYGSGTQYHMQLAKQLAGILQVPLEERGGIMSLTEVYCLVNRARGMELLSP 284
Query: 300 EDLLNACKLLRTVDAPMSLRKFPSGACVLQLNSNRDEEIAKSTSDMIQENGYLTPEKLSQ 359
EDL+NACK+L + P+ LR F SG V++L S+++EE+ S + + E G LT E+ ++
Sbjct: 285 EDLVNACKMLEALKLPLRLRVFDSGVMVIELQSHKEEEMVASALETVSEKGSLTSEEFAK 344
Query: 360 IANVSVLLARERLFTTERLGLACRDESIEGLAFYPNRFLLEA 401
+ +SVLLA+ERL E++G CRD+S+EGL FYPN F+ ++
Sbjct: 345 LVGMSVLLAKERLLLAEKMGHLCRDDSVEGLRFYPNLFMTQS 386
>BC037279-1|AAH37279.1| 386|Homo sapiens vacuolar protein sorting
36 homolog (S. cerevisiae) protein.
Length = 386
Score = 353 bits (869), Expect = 5e-97
Identities = 179/402 (44%), Positives = 267/402 (66%), Gaps = 17/402 (4%)
Query: 1 MDRFEYIEARLFDGENYLKRDKNVKIYDGDDKTQFIDGEVLLTTHRLLWGKPGDIPKGLV 60
MDRF + L E + + + V+IYDG++K +F G +LL+THRL+W D
Sbjct: 1 MDRFVWTSGLLEINETLVIQQRGVRIYDGEEKIKFDAGTLLLSTHRLIWR---DQKNHEC 57
Query: 61 CLSLHLYYVFCLEEESGGVFGLGGPKRIIMHLGPALPGKRPGPAVVSPFHYVKLSFKDGV 120
C+++ L + +EE++ G+ G +I++HL PA P K PGP S Y+KLSFK+
Sbjct: 58 CMAILLSQIVFIEEQAAGI---GKSAKIVVHLHPAPPNKEPGPFQSSKNSYIKLSFKEHG 114
Query: 121 DTAFYKALSDAVAAKAWERQTPIDXXXXXXXXXXXXXXXXXXXNSKIRS-GIVGIERSIE 179
FY+ LS+ + + WE P+ +IR+ GIVGIER +E
Sbjct: 115 QIEFYRRLSEEMTQRRWENM-PVSQSLQTNRGPQP---------GRIRAVGIVGIERKLE 164
Query: 180 EQHRATDQSISVAFQDLTKLMEKAKEMVSLSKNISTKIREKQGDISEDDTVRFKSYLMSL 239
E+ + TD++IS AF+DL+KLM KAKEMV LSK+I+ KI++KQGDI+ED+T+RFKSYL+S+
Sbjct: 165 EKRKETDKNISEAFEDLSKLMIKAKEMVELSKSIANKIKDKQGDITEDETIRFKSYLLSM 224
Query: 240 GIDDPVTRDAFRSDSEYYLGLAQQVSDMMVAVLLECGGIMSLADVWCRVNRARGLELVSP 299
GI +PVTR+ + S ++Y++ LA+Q++ ++ L E GGIMSL +V+C VNRARG+EL+SP
Sbjct: 225 GIANPVTRETYGSGTQYHMQLAKQLAGILQVPLEERGGIMSLTEVYCLVNRARGMELLSP 284
Query: 300 EDLLNACKLLRTVDAPMSLRKFPSGACVLQLNSNRDEEIAKSTSDMIQENGYLTPEKLSQ 359
EDL+NACK+L + P+ LR F SG V++L S+++EE+ S + + E G LT E+ ++
Sbjct: 285 EDLVNACKMLEALKLPLRLRVFDSGVMVIELQSHKEEEMVASALETVSEKGSLTSEEFAK 344
Query: 360 IANVSVLLARERLFTTERLGLACRDESIEGLAFYPNRFLLEA 401
+ +SVLLA+ERL E++G CRD+S+EGL FYPN F+ ++
Sbjct: 345 LVGMSVLLAKERLLLAEKMGHLCRDDSVEGLRFYPNLFMTQS 386
>AL359513-3|CAH71658.1| 386|Homo sapiens vacuolar protein sorting
36 (yeast) protein.
Length = 386
Score = 353 bits (869), Expect = 5e-97
Identities = 179/402 (44%), Positives = 267/402 (66%), Gaps = 17/402 (4%)
Query: 1 MDRFEYIEARLFDGENYLKRDKNVKIYDGDDKTQFIDGEVLLTTHRLLWGKPGDIPKGLV 60
MDRF + L E + + + V+IYDG++K +F G +LL+THRL+W D
Sbjct: 1 MDRFVWTSGLLEINETLVIQQRGVRIYDGEEKIKFDAGTLLLSTHRLIWR---DQKNHEC 57
Query: 61 CLSLHLYYVFCLEEESGGVFGLGGPKRIIMHLGPALPGKRPGPAVVSPFHYVKLSFKDGV 120
C+++ L + +EE++ G+ G +I++HL PA P K PGP S Y+KLSFK+
Sbjct: 58 CMAILLSQIVFIEEQAAGI---GKSAKIVVHLHPAPPNKEPGPFQSSKNSYIKLSFKEHG 114
Query: 121 DTAFYKALSDAVAAKAWERQTPIDXXXXXXXXXXXXXXXXXXXNSKIRS-GIVGIERSIE 179
FY+ LS+ + + WE P+ +IR+ GIVGIER +E
Sbjct: 115 QIEFYRRLSEEMTQRRWENM-PVSQSLQTNRGPQP---------GRIRAVGIVGIERKLE 164
Query: 180 EQHRATDQSISVAFQDLTKLMEKAKEMVSLSKNISTKIREKQGDISEDDTVRFKSYLMSL 239
E+ + TD++IS AF+DL+KLM KAKEMV LSK+I+ KI++KQGDI+ED+T+RFKSYL+S+
Sbjct: 165 EKRKETDKNISEAFEDLSKLMIKAKEMVELSKSIANKIKDKQGDITEDETIRFKSYLLSM 224
Query: 240 GIDDPVTRDAFRSDSEYYLGLAQQVSDMMVAVLLECGGIMSLADVWCRVNRARGLELVSP 299
GI +PVTR+ + S ++Y++ LA+Q++ ++ L E GGIMSL +V+C VNRARG+EL+SP
Sbjct: 225 GIANPVTRETYGSGTQYHMQLAKQLAGILQVPLEERGGIMSLTEVYCLVNRARGMELLSP 284
Query: 300 EDLLNACKLLRTVDAPMSLRKFPSGACVLQLNSNRDEEIAKSTSDMIQENGYLTPEKLSQ 359
EDL+NACK+L + P+ LR F SG V++L S+++EE+ S + + E G LT E+ ++
Sbjct: 285 EDLVNACKMLEALKLPLRLRVFDSGVMVIELQSHKEEEMVASALETVSEKGSLTSEEFAK 344
Query: 360 IANVSVLLARERLFTTERLGLACRDESIEGLAFYPNRFLLEA 401
+ +SVLLA+ERL E++G CRD+S+EGL FYPN F+ ++
Sbjct: 345 LVGMSVLLAKERLLLAEKMGHLCRDDSVEGLRFYPNLFMTQS 386
>AF151903-1|AAD34140.1| 386|Homo sapiens CGI-145 protein protein.
Length = 386
Score = 351 bits (864), Expect = 2e-96
Identities = 178/402 (44%), Positives = 266/402 (66%), Gaps = 17/402 (4%)
Query: 1 MDRFEYIEARLFDGENYLKRDKNVKIYDGDDKTQFIDGEVLLTTHRLLWGKPGDIPKGLV 60
MDRF + L E + + + V+IYDG++K +F G +LL+THRL+W D
Sbjct: 1 MDRFVWTSGLLEINETLVIQQRGVRIYDGEEKIKFDAGTLLLSTHRLIWR---DQKNHEC 57
Query: 61 CLSLHLYYVFCLEEESGGVFGLGGPKRIIMHLGPALPGKRPGPAVVSPFHYVKLSFKDGV 120
C+++ L + +EE++ G+ G +I++HL PA P K PGP S Y+KLSFK+
Sbjct: 58 CMAILLSQIVFIEEQAAGI---GKSAKIVVHLHPAPPNKEPGPFQSSKNSYIKLSFKEHG 114
Query: 121 DTAFYKALSDAVAAKAWERQTPIDXXXXXXXXXXXXXXXXXXXNSKIRS-GIVGIERSIE 179
FY+ LS+ + + WE P+ +IR+ GIVGIER +E
Sbjct: 115 QIEFYRRLSEEMTQRRWENM-PVSQSLQTNRGPQP---------GRIRAVGIVGIERKLE 164
Query: 180 EQHRATDQSISVAFQDLTKLMEKAKEMVSLSKNISTKIREKQGDISEDDTVRFKSYLMSL 239
E+ + TD++IS AF+DL+KLM KAKEMV LSK+I+ KI++KQGDI+ED+T+RFKSYL+ +
Sbjct: 165 EKRKETDKNISEAFEDLSKLMIKAKEMVELSKSIANKIKDKQGDITEDETIRFKSYLLRM 224
Query: 240 GIDDPVTRDAFRSDSEYYLGLAQQVSDMMVAVLLECGGIMSLADVWCRVNRARGLELVSP 299
GI +PVTR+ + S ++Y++ LA+Q++ ++ L E GGIMSL +V+C VNRARG+EL+SP
Sbjct: 225 GIANPVTRETYGSGTQYHMQLAKQLAGILQVPLEERGGIMSLTEVYCLVNRARGMELLSP 284
Query: 300 EDLLNACKLLRTVDAPMSLRKFPSGACVLQLNSNRDEEIAKSTSDMIQENGYLTPEKLSQ 359
EDL+NACK+L + P+ LR F SG V++L S+++EE+ S + + E G LT E+ ++
Sbjct: 285 EDLVNACKMLEALKLPLRLRVFDSGVMVIELQSHKEEEMVASALETVSEKGSLTSEEFAK 344
Query: 360 IANVSVLLARERLFTTERLGLACRDESIEGLAFYPNRFLLEA 401
+ +SVLLA+ERL E++G CRD+S+EGL FYPN F+ ++
Sbjct: 345 LVGMSVLLAKERLLLAEKMGHLCRDDSVEGLRFYPNLFMTQS 386
>AK023182-1|BAB14451.1| 261|Homo sapiens protein ( Homo sapiens
cDNA FLJ13120 fis, clone NT2RP3002682, highly similar to
Homo sapiens CGI-145 protein mRNA. ).
Length = 261
Score = 274 bits (673), Expect = 3e-73
Identities = 127/237 (53%), Positives = 186/237 (78%), Gaps = 1/237 (0%)
Query: 166 KIRS-GIVGIERSIEEQHRATDQSISVAFQDLTKLMEKAKEMVSLSKNISTKIREKQGDI 224
+IR+ GIVGIER +EE+ + TD++IS AF+DL+KLM KAKEMV LSK+I+ KI++KQGDI
Sbjct: 25 RIRAVGIVGIERKLEEKRKETDKNISEAFEDLSKLMIKAKEMVELSKSIANKIKDKQGDI 84
Query: 225 SEDDTVRFKSYLMSLGIDDPVTRDAFRSDSEYYLGLAQQVSDMMVAVLLECGGIMSLADV 284
+ED+T+RFKSYL+S+GI +PVTR+ + S ++Y++ LA+Q++ ++ L E GGIMSL +V
Sbjct: 85 TEDETIRFKSYLLSMGIANPVTRETYGSGTQYHMQLAKQLAGILQVPLEERGGIMSLTEV 144
Query: 285 WCRVNRARGLELVSPEDLLNACKLLRTVDAPMSLRKFPSGACVLQLNSNRDEEIAKSTSD 344
+C VNRARG+EL+SPEDL+NACK+L + P+ LR F SG V++L S+++EE+ S +
Sbjct: 145 YCLVNRARGMELLSPEDLVNACKMLEALKLPLRLRVFDSGVMVIELQSHKEEEMVASALE 204
Query: 345 MIQENGYLTPEKLSQIANVSVLLARERLFTTERLGLACRDESIEGLAFYPNRFLLEA 401
+ E G LT E+ +++ +SVLLA+ERL E++G CRD+S+EGL FYPN F+ ++
Sbjct: 205 TVSEKGSLTSEEFAKLVGMSVLLAKERLLLAEKMGHLCRDDSVEGLRFYPNLFMTQS 261
>AB208956-1|BAD92193.1| 224|Homo sapiens Hypothetical protein
FLJ13120 variant protein.
Length = 224
Score = 247 bits (605), Expect = 5e-65
Identities = 112/210 (53%), Positives = 164/210 (78%)
Query: 192 AFQDLTKLMEKAKEMVSLSKNISTKIREKQGDISEDDTVRFKSYLMSLGIDDPVTRDAFR 251
AF+DL+KLM KAKEMV LSK+I+ KI++KQGDI+ED+T+RFKSYL+S+GI +PVTR+ +
Sbjct: 15 AFEDLSKLMIKAKEMVELSKSIANKIKDKQGDITEDETIRFKSYLLSMGIANPVTRETYG 74
Query: 252 SDSEYYLGLAQQVSDMMVAVLLECGGIMSLADVWCRVNRARGLELVSPEDLLNACKLLRT 311
S ++Y++ LA+Q++ ++ L E GGIMSL +V+C VNRARG+EL+SPEDL+NACK+L
Sbjct: 75 SGTQYHMQLAKQLAGILQVPLEERGGIMSLTEVYCLVNRARGMELLSPEDLVNACKMLEA 134
Query: 312 VDAPMSLRKFPSGACVLQLNSNRDEEIAKSTSDMIQENGYLTPEKLSQIANVSVLLARER 371
+ P+ LR F SG V++L S+++EE+ S + + E G LT E+ +++ +SVLLA+ER
Sbjct: 135 LKLPLRLRVFDSGVMVIELQSHKEEEMVASALETVSEKGSLTSEEFAKLVGMSVLLAKER 194
Query: 372 LFTTERLGLACRDESIEGLAFYPNRFLLEA 401
L E++G CRD+S+EGL FYPN F+ ++
Sbjct: 195 LLLAEKMGHLCRDDSVEGLRFYPNLFMTQS 224
>BC038830-1|AAH38830.1| 257|Homo sapiens SNF8, ESCRT-II complex
subunit, homolog (S. cerevisiae) protein.
Length = 257
Score = 48.8 bits (111), Expect = 3e-05
Identities = 45/204 (22%), Positives = 93/204 (45%), Gaps = 10/204 (4%)
Query: 198 KLMEKAKEMVSLSKNISTKIREKQGDISEDDT--VRFKSYLMSLGIDDPVTRDAFRSD-- 253
+L + +K++ N+ + + +I ++ V+F+ ++G+D + F S+
Sbjct: 32 QLAQMSKQLDMFKTNLEEFASKHKQEIRKNPEFRVQFQDMCATIGVDPLASGKGFWSEML 91
Query: 254 --SEYYLGLAQQVSDMMVAVLLECGGIMSLADVWCRVNRARG--LELVSPEDLLNACKLL 309
++Y L Q+ ++ +A+ GG+++L ++ +V + RG + VS +DL+ A K L
Sbjct: 92 GVGDFYYELGVQIIEVCLALKHRNGGLITLEELHQQVLKGRGKFAQDVSQDDLIRAIKKL 151
Query: 310 RTVDAPMSLRKFPSGACVLQLNSNRDEEIAKSTSDMIQENGYLTPEKLSQIANVSVLLAR 369
+ + + P G L + + + + + ENGY+T ++ AR
Sbjct: 152 KALGTGFGI--IPVGGTYLIQSVPAELNMDHTVVLQLAENGYVTVSEIKASLKWETERAR 209
Query: 370 ERLFTTERLGLACRDESIEGLAFY 393
+ L + GLA D G A Y
Sbjct: 210 QVLEHLLKEGLAWLDLQAPGEAHY 233
>BC008976-1|AAH08976.1| 258|Homo sapiens SNF8, ESCRT-II complex
subunit, homolog (S. cerevisiae) protein.
Length = 258
Score = 45.2 bits (102), Expect = 4e-04
Identities = 44/205 (21%), Positives = 94/205 (45%), Gaps = 11/205 (5%)
Query: 198 KLMEKAKEMVSLSKNISTKIREKQGDISEDDT--VRFKSYLMSLGIDDPVTRDAFRSD-- 253
+L + +K++ N+ + + +I ++ V+F+ ++G+D + F S+
Sbjct: 32 QLAQMSKQLDMFKTNLEEFASKHKQEIRKNPEFRVQFQDMCATIGVDPLASGKGFWSEML 91
Query: 254 --SEYYLGLAQQVSDMMVAVLLECGGIMSLADVWCRVNRARG--LELVSPEDLLNACKLL 309
++Y L Q+ ++ +A+ GG+++L ++ +V + RG + VS +DL+ A K L
Sbjct: 92 GVGDFYYELGVQIIEVCLALKHRNGGLITLEELHQQVLKGRGKFAQDVSQDDLIRAIKKL 151
Query: 310 RTVDAPMSLRKFPSGACVLQLNSNRDEEIAKS-TSDMIQENGYLTPEKLSQIANVSVLLA 368
+ + + P G L + + + + + ++NGY+T ++ A
Sbjct: 152 KALGTGFGI--IPVGGTYLIQSVPAELNMDHTVVLQLAEKNGYVTVSEIKASLKWETERA 209
Query: 369 RERLFTTERLGLACRDESIEGLAFY 393
R+ L + GLA D G A Y
Sbjct: 210 RQVLEHLLKEGLAWLDLQAPGEAHY 234
>AF156102-1|AAD46560.1| 258|Homo sapiens ELL complex EAP30 subunit
protein.
Length = 258
Score = 45.2 bits (102), Expect = 4e-04
Identities = 44/205 (21%), Positives = 94/205 (45%), Gaps = 11/205 (5%)
Query: 198 KLMEKAKEMVSLSKNISTKIREKQGDISEDDT--VRFKSYLMSLGIDDPVTRDAFRSD-- 253
+L + +K++ N+ + + +I ++ V+F+ ++G+D + F S+
Sbjct: 32 QLAQMSKQLDMFKTNLEEFASKHKQEIRKNPEFRVQFQDMCATIGVDPLASGKGFWSEML 91
Query: 254 --SEYYLGLAQQVSDMMVAVLLECGGIMSLADVWCRVNRARG--LELVSPEDLLNACKLL 309
++Y L Q+ ++ +A+ GG+++L ++ +V + RG + VS +DL+ A K L
Sbjct: 92 GVGDFYYELGVQIIEVCLALKHRNGGLITLEELHQQVLKGRGKFAQDVSQDDLIRAIKKL 151
Query: 310 RTVDAPMSLRKFPSGACVLQLNSNRDEEIAKS-TSDMIQENGYLTPEKLSQIANVSVLLA 368
+ + + P G L + + + + + ++NGY+T ++ A
Sbjct: 152 KALGTGFGI--IPVGGTYLIQSVPAELNMDHTVVLQLAEKNGYVTVSEIKASLKWETERA 209
Query: 369 RERLFTTERLGLACRDESIEGLAFY 393
R+ L + GLA D G A Y
Sbjct: 210 RQVLEHLLKEGLAWLDLQAPGEAHY 234
>U33822-1|AAC52059.1| 803|Homo sapiens TXBP181 protein.
Length = 803
Score = 30.7 bits (66), Expect = 9.5
Identities = 21/109 (19%), Positives = 55/109 (50%), Gaps = 1/109 (0%)
Query: 194 QDLTKLMEKAKEMVSLSKNISTKIREKQGDISEDDTVRFKSYLMSLGIDDPVTRDAFRSD 253
+DL + + ++ ++ KN+ +++ E + +R +S L + + + ++
Sbjct: 226 KDLEQKLSLQEQDAAIVKNMKSELVRLPRLERELEQLREESALREMRETNGLLQEELEG- 284
Query: 254 SEYYLGLAQQVSDMMVAVLLECGGIMSLADVWCRVNRARGLELVSPEDL 302
+ LG +++ + +V + LE +++ W R+++ GL + +PEDL
Sbjct: 285 LQRKLGRQEKMQETLVGLELENERLLAKLQSWERLDQTMGLSIRTPEDL 333
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.319 0.137 0.397
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,325,067
Number of Sequences: 224733
Number of extensions: 2352635
Number of successful extensions: 4955
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 4935
Number of HSP's gapped (non-prelim): 14
length of query: 401
length of database: 73,234,838
effective HSP length: 92
effective length of query: 309
effective length of database: 52,559,402
effective search space: 16240855218
effective search space used: 16240855218
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 66 (30.7 bits)
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