BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001159-TA|BGIBMGA001159-PA|IPR007261|Vacuolar protein sorting 36 (401 letters) Database: fruitfly 52,641 sequences; 24,830,863 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY118941-1|AAM50801.1| 399|Drosophila melanogaster LD27255p pro... 394 e-109 AE014296-2300|AAF49802.2| 399|Drosophila melanogaster CG10711-P... 392 e-109 AE014297-3051|AAF55927.1| 254|Drosophila melanogaster CG6637-PA... 39 0.011 AE014298-2398|AAF48605.1| 1060|Drosophila melanogaster CG9981-PA... 32 1.2 BT003457-1|AAO39460.1| 985|Drosophila melanogaster RH34107p pro... 32 1.6 AE014297-1126|AAF54512.1| 985|Drosophila melanogaster CG3999-PA... 32 1.6 Z11743-1|CAA77802.1| 1403|Drosophila melanogaster prospero protein. 31 3.7 M81389-1|AAA28841.1| 1407|Drosophila melanogaster Pros protein p... 31 3.7 D10609-1|BAA01464.1| 1403|Drosophila melanogaster prospero protein. 31 3.7 BT015263-1|AAT94492.1| 1374|Drosophila melanogaster LD37627p pro... 31 3.7 AF190403-1|AAF05703.1| 1403|Drosophila melanogaster homeodomain ... 31 3.7 AE014297-1287|AAN13500.2| 1374|Drosophila melanogaster CG17228-P... 31 3.7 AE014297-1286|AAF54628.2| 1403|Drosophila melanogaster CG17228-P... 31 3.7 AE014297-1285|AAN13501.2| 1535|Drosophila melanogaster CG17228-P... 31 3.7 AY226548-1|AAO47374.1| 404|Drosophila melanogaster pickpocket 2... 30 6.5 AY089579-1|AAL90317.1| 911|Drosophila melanogaster RE11181p pro... 30 6.5 AE014297-4405|AAF56910.2| 587|Drosophila melanogaster CG7577-PA... 30 6.5 AE014297-3664|AAF56360.2| 911|Drosophila melanogaster CG31121-P... 30 6.5 AE014297-3663|AAF56359.2| 911|Drosophila melanogaster CG31121-P... 30 6.5 >AY118941-1|AAM50801.1| 399|Drosophila melanogaster LD27255p protein. Length = 399 Score = 394 bits (969), Expect = e-109 Identities = 204/399 (51%), Positives = 267/399 (66%), Gaps = 4/399 (1%) Query: 1 MDRFEYIEARLFDGENYLKRDKNVKIYDGDDKTQFIDGEVLLTTHRLLWGKPGDIPKGLV 60 M+RF Y+EARL E+++ RD VKIYDGD KT F DGEV+LTTHRL WG+PG+I + V Sbjct: 1 MNRFAYVEARLSPNESFVSRDNRVKIYDGDQKTDFEDGEVVLTTHRLFWGRPGEIARAAV 60 Query: 61 CLSLHLYYVFCLEEESGGVFGLGGPKRIIMHLGPALPGKRPGPAVVSPFHYVKLSFKDGV 120 L L L YV + EE+ G RIIMHL P K PGP S ++KLS K+G+ Sbjct: 61 TLCLPLSYVISVSEETTASNFFGRKTRIIMHLHPPTSDKGPGPLDTSRATHIKLSGKNGL 120 Query: 121 DTAFYKALSDAVAAKAWERQTPIDXXXXXXXXXXXXX-XXXXXXNSKIRSGIVGIERSIE 179 F+ AL + + A+ WE + + R+GI GIER +E Sbjct: 121 SVEFHSALRETLNARVWEILLTSEIIINGVASSPTLEPANDRLARIQKRTGIGGIERHLE 180 Query: 180 EQHRATDQSISVAFQDLTKLMEKAKEMVSLSKNISTKIREKQGDISEDDTVRFKSYLMSL 239 + +ATD++I++AFQDL+ LM AK+MV +SK IS+KIRE++G+IS+D+TVRFKSYLMSL Sbjct: 181 AKAKATDENIALAFQDLSVLMAMAKDMVGVSKTISSKIREQKGEISDDETVRFKSYLMSL 240 Query: 240 GIDDPVTRDAFRSDSEYYLGLAQQVSDMMVAVLLECGGIMSLADVWCRVNRARGLELVSP 299 GIDDPVTRD F S+S Y+ LA+Q+ +M++ + E GG+MSLADV+CRVNRARGLEL+SP Sbjct: 241 GIDDPVTRDNFTSNSAYFSSLARQICEMLLDPIEEQGGMMSLADVYCRVNRARGLELLSP 300 Query: 300 EDLLNACKLLRTVDAPMSLRKFPSGACVLQLNSNRDEEIAKSTSDMIQENGYLTPEKLSQ 359 EDLL+AC+ L P+ LR FPSGA VLQL S+ D IA T + ++ L E+L++ Sbjct: 301 EDLLHACEQL---SGPIRLRSFPSGARVLQLESHDDALIAVDTLEKVEAAESLAVEELAK 357 Query: 360 IANVSVLLARERLFTTERLGLACRDESIEGLAFYPNRFL 398 +S+LLA+ERL ERLG CRDES+EGL FYPN L Sbjct: 358 QLGISLLLAKERLLVAERLGKVCRDESVEGLRFYPNLLL 396 >AE014296-2300|AAF49802.2| 399|Drosophila melanogaster CG10711-PA protein. Length = 399 Score = 392 bits (965), Expect = e-109 Identities = 203/399 (50%), Positives = 267/399 (66%), Gaps = 4/399 (1%) Query: 1 MDRFEYIEARLFDGENYLKRDKNVKIYDGDDKTQFIDGEVLLTTHRLLWGKPGDIPKGLV 60 M+RF Y+EARL E+++ RD VKIYDGD KT F DGEV+LTTHRL WG+PG+I + V Sbjct: 1 MNRFAYVEARLSPNESFVSRDNRVKIYDGDQKTDFEDGEVVLTTHRLFWGRPGEIARAAV 60 Query: 61 CLSLHLYYVFCLEEESGGVFGLGGPKRIIMHLGPALPGKRPGPAVVSPFHYVKLSFKDGV 120 L L L YV + EE+ G RIIMHL P K PGP S ++KLS K+G+ Sbjct: 61 TLCLPLSYVISVSEETTASNFFGRKTRIIMHLHPPTSDKGPGPLDTSRATHIKLSGKNGL 120 Query: 121 DTAFYKALSDAVAAKAWERQTPIDXXXXXXXXXXXXX-XXXXXXNSKIRSGIVGIERSIE 179 F+ AL + + A+ WE + + R+GI GIER +E Sbjct: 121 SVEFHSALRETLNARVWEILLTSEIIINGVASSPTLEPANDRLARIQKRTGIGGIERHLE 180 Query: 180 EQHRATDQSISVAFQDLTKLMEKAKEMVSLSKNISTKIREKQGDISEDDTVRFKSYLMSL 239 + +ATD++I++AFQDL+ LM AK+MV +SK IS+KIR+++G+IS+D+TVRFKSYLMSL Sbjct: 181 AKAKATDENIALAFQDLSVLMAMAKDMVGVSKTISSKIRKQKGEISDDETVRFKSYLMSL 240 Query: 240 GIDDPVTRDAFRSDSEYYLGLAQQVSDMMVAVLLECGGIMSLADVWCRVNRARGLELVSP 299 GIDDPVTRD F S+S Y+ LA+Q+ +M++ + E GG+MSLADV+CRVNRARGLEL+SP Sbjct: 241 GIDDPVTRDNFTSNSAYFSSLARQICEMLLDPIEEQGGMMSLADVYCRVNRARGLELLSP 300 Query: 300 EDLLNACKLLRTVDAPMSLRKFPSGACVLQLNSNRDEEIAKSTSDMIQENGYLTPEKLSQ 359 EDLL+AC+ L P+ LR FPSGA VLQL S+ D IA T + ++ L E+L++ Sbjct: 301 EDLLHACEQL---SGPIRLRSFPSGARVLQLESHDDALIAVDTLEKVEAAESLAVEELAK 357 Query: 360 IANVSVLLARERLFTTERLGLACRDESIEGLAFYPNRFL 398 +S+LLA+ERL ERLG CRDES+EGL FYPN L Sbjct: 358 QLGISLLLAKERLLVAERLGKVCRDESVEGLRFYPNLLL 396 >AE014297-3051|AAF55927.1| 254|Drosophila melanogaster CG6637-PA protein. Length = 254 Score = 39.1 bits (87), Expect = 0.011 Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 9/141 (6%) Query: 198 KLMEKAKEMVSLSKNISTKIREKQGDISEDDTVR--FKSYLMSLGIDDPVTRDAFRSD-- 253 +L + K+M + + + DI ++ R F+ ++G+D T F S Sbjct: 31 QLEQMTKQMEVFRVKLEEFAMKHKEDIRKNSQFRKQFQEMCAAIGVDPLATGKGFWSVLG 90 Query: 254 -SEYYLGLAQQVSDMMVAVLLECGGIMSLADVWCRVNRARGL----ELVSPEDLLNACKL 308 ++Y L QV ++ +A + GG+M L D+ R+ ARG + ++ ED+L A K Sbjct: 91 MGDFYYELGVQVVEVCLAANHKTGGLMELDDLRRRLIAARGQSSVHQEITKEDILMAAKK 150 Query: 309 LRTVDAPMSLRKFPSGACVLQ 329 L + K G ++Q Sbjct: 151 LSIFGNGFVVHKLGKGKYIVQ 171 >AE014298-2398|AAF48605.1| 1060|Drosophila melanogaster CG9981-PA protein. Length = 1060 Score = 32.3 bits (70), Expect = 1.2 Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 2/94 (2%) Query: 291 ARGLELVSPEDLLNACKLLRTVDAPMSLRKFPSGACVLQLNSNRDEEIAKSTSDMIQENG 350 A G +++ ++L + +L R + +S R +C + + D A + D +QE+ Sbjct: 593 AVGRRMLTDDELFHFEELYRKANTQLSNRNELIASCYETVENELDLLGATALEDALQEHV 652 Query: 351 YLTPEKLSQIANVSV-LLARERLFTTERLGLACR 383 T E L Q A + + +L +++ T +GLACR Sbjct: 653 GETLEAL-QAAGLKIWVLTGDKVETAYNIGLACR 685 >BT003457-1|AAO39460.1| 985|Drosophila melanogaster RH34107p protein. Length = 985 Score = 31.9 bits (69), Expect = 1.6 Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 8/66 (12%) Query: 51 KPGDIPKGLVCLSLHLYYVFCLEEESGGVFGLGGPKRIIMHLGPALPGKRPGPAVVSPFH 110 +PGD + L+LH FC+ GG G+G P + HL P LPG VVSP Sbjct: 715 RPGDYGSDVSHLNLHK--TFCIPHGGGGP-GMG-PIGVKAHLAPYLPGH----PVVSPLS 766 Query: 111 YVKLSF 116 + SF Sbjct: 767 SEEHSF 772 >AE014297-1126|AAF54512.1| 985|Drosophila melanogaster CG3999-PA protein. Length = 985 Score = 31.9 bits (69), Expect = 1.6 Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 8/66 (12%) Query: 51 KPGDIPKGLVCLSLHLYYVFCLEEESGGVFGLGGPKRIIMHLGPALPGKRPGPAVVSPFH 110 +PGD + L+LH FC+ GG G+G P + HL P LPG VVSP Sbjct: 715 RPGDYGSDVSHLNLHK--TFCIPHGGGGP-GMG-PIGVKAHLAPYLPGH----PVVSPLS 766 Query: 111 YVKLSF 116 + SF Sbjct: 767 SEEHSF 772 >Z11743-1|CAA77802.1| 1403|Drosophila melanogaster prospero protein. Length = 1403 Score = 30.7 bits (66), Expect = 3.7 Identities = 14/54 (25%), Positives = 30/54 (55%) Query: 180 EQHRATDQSISVAFQDLTKLMEKAKEMVSLSKNISTKIREKQGDISEDDTVRFK 233 EQH++ Q VA L +++ KE++ L + + T ++++Q + E + + K Sbjct: 215 EQHQSQLQHDLVAHHMLRNILQGKKELMQLDQELRTAMQQQQQQLQEKEQLHSK 268 >M81389-1|AAA28841.1| 1407|Drosophila melanogaster Pros protein protein. Length = 1407 Score = 30.7 bits (66), Expect = 3.7 Identities = 14/54 (25%), Positives = 30/54 (55%) Query: 180 EQHRATDQSISVAFQDLTKLMEKAKEMVSLSKNISTKIREKQGDISEDDTVRFK 233 EQH++ Q VA L +++ KE++ L + + T ++++Q + E + + K Sbjct: 215 EQHQSQLQHDLVAHHMLRNILQGKKELMQLDQELRTAMQQQQQQLQEKEQLHSK 268 >D10609-1|BAA01464.1| 1403|Drosophila melanogaster prospero protein. Length = 1403 Score = 30.7 bits (66), Expect = 3.7 Identities = 14/54 (25%), Positives = 30/54 (55%) Query: 180 EQHRATDQSISVAFQDLTKLMEKAKEMVSLSKNISTKIREKQGDISEDDTVRFK 233 EQH++ Q VA L +++ KE++ L + + T ++++Q + E + + K Sbjct: 215 EQHQSQLQHDLVAHHMLRNILQGKKELMQLDQELRTAMQQQQQQLQEKEQLHSK 268 >BT015263-1|AAT94492.1| 1374|Drosophila melanogaster LD37627p protein. Length = 1374 Score = 30.7 bits (66), Expect = 3.7 Identities = 14/54 (25%), Positives = 30/54 (55%) Query: 180 EQHRATDQSISVAFQDLTKLMEKAKEMVSLSKNISTKIREKQGDISEDDTVRFK 233 EQH++ Q VA L +++ KE++ L + + T ++++Q + E + + K Sbjct: 215 EQHQSQLQHDLVAHHMLRNILQGKKELMQLDQELRTAMQQQQQQLQEKEQLHSK 268 >AF190403-1|AAF05703.1| 1403|Drosophila melanogaster homeodomain transcription factorProspero protein. Length = 1403 Score = 30.7 bits (66), Expect = 3.7 Identities = 14/54 (25%), Positives = 30/54 (55%) Query: 180 EQHRATDQSISVAFQDLTKLMEKAKEMVSLSKNISTKIREKQGDISEDDTVRFK 233 EQH++ Q VA L +++ KE++ L + + T ++++Q + E + + K Sbjct: 215 EQHQSQLQHDLVAHHMLRNILQGKKELMQLDQELRTAMQQQQQQLQEKEQLHSK 268 >AE014297-1287|AAN13500.2| 1374|Drosophila melanogaster CG17228-PD, isoform D protein. Length = 1374 Score = 30.7 bits (66), Expect = 3.7 Identities = 14/54 (25%), Positives = 30/54 (55%) Query: 180 EQHRATDQSISVAFQDLTKLMEKAKEMVSLSKNISTKIREKQGDISEDDTVRFK 233 EQH++ Q VA L +++ KE++ L + + T ++++Q + E + + K Sbjct: 215 EQHQSQLQHDLVAHHMLRNILQGKKELMQLDQELRTAMQQQQQQLQEKEQLHSK 268 >AE014297-1286|AAF54628.2| 1403|Drosophila melanogaster CG17228-PC, isoform C protein. Length = 1403 Score = 30.7 bits (66), Expect = 3.7 Identities = 14/54 (25%), Positives = 30/54 (55%) Query: 180 EQHRATDQSISVAFQDLTKLMEKAKEMVSLSKNISTKIREKQGDISEDDTVRFK 233 EQH++ Q VA L +++ KE++ L + + T ++++Q + E + + K Sbjct: 215 EQHQSQLQHDLVAHHMLRNILQGKKELMQLDQELRTAMQQQQQQLQEKEQLHSK 268 >AE014297-1285|AAN13501.2| 1535|Drosophila melanogaster CG17228-PA, isoform A protein. Length = 1535 Score = 30.7 bits (66), Expect = 3.7 Identities = 14/54 (25%), Positives = 30/54 (55%) Query: 180 EQHRATDQSISVAFQDLTKLMEKAKEMVSLSKNISTKIREKQGDISEDDTVRFK 233 EQH++ Q VA L +++ KE++ L + + T ++++Q + E + + K Sbjct: 215 EQHQSQLQHDLVAHHMLRNILQGKKELMQLDQELRTAMQQQQQQLQEKEQLHSK 268 >AY226548-1|AAO47374.1| 404|Drosophila melanogaster pickpocket 20 protein. Length = 404 Score = 29.9 bits (64), Expect = 6.5 Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 4/73 (5%) Query: 200 MEKAKEMVSLSKNISTKIREKQGD-ISEDDTVRFKSYLMSLG--IDDPVTRDAFRSDSEY 256 +E AKE L N S ++ E +S +T+RF SYL SL DD + F + +E Sbjct: 140 LEAAKEQF-LPTNASVELVESFTVLVSRMETLRFGSYLSSLAELEDDNLEAVGFVNLTEL 198 Query: 257 YLGLAQQVSDMMV 269 + + Q SD+MV Sbjct: 199 AIFMTLQCSDIMV 211 >AY089579-1|AAL90317.1| 911|Drosophila melanogaster RE11181p protein. Length = 911 Score = 29.9 bits (64), Expect = 6.5 Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 2/41 (4%) Query: 250 FRSDSEYYLGLAQQVSDMMVAVLLECGG-IMSLADVWCRVN 289 F++ ++YYL L + D+ A +LE I SLA+ W ++N Sbjct: 537 FKNPADYYLDLV-TLDDLSAAAMLESSARIESLANAWDQIN 576 >AE014297-4405|AAF56910.2| 587|Drosophila melanogaster CG7577-PA protein. Length = 587 Score = 29.9 bits (64), Expect = 6.5 Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 4/73 (5%) Query: 200 MEKAKEMVSLSKNISTKIREKQGD-ISEDDTVRFKSYLMSLG--IDDPVTRDAFRSDSEY 256 +E AKE L N S ++ E +S +T+RF SYL SL DD + F + +E Sbjct: 140 LEAAKEQF-LPTNASVELVESFTVLVSRMETLRFGSYLSSLAELEDDNLEAVGFVNLTEL 198 Query: 257 YLGLAQQVSDMMV 269 + + Q SD+MV Sbjct: 199 AIFMTLQCSDIMV 211 >AE014297-3664|AAF56360.2| 911|Drosophila melanogaster CG31121-PB, isoform B protein. Length = 911 Score = 29.9 bits (64), Expect = 6.5 Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 2/41 (4%) Query: 250 FRSDSEYYLGLAQQVSDMMVAVLLECGG-IMSLADVWCRVN 289 F++ ++YYL L + D+ A +LE I SLA+ W ++N Sbjct: 537 FKNPADYYLDLV-TLDDLSAAAMLESSARIESLANAWDQIN 576 >AE014297-3663|AAF56359.2| 911|Drosophila melanogaster CG31121-PA, isoform A protein. Length = 911 Score = 29.9 bits (64), Expect = 6.5 Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 2/41 (4%) Query: 250 FRSDSEYYLGLAQQVSDMMVAVLLECGG-IMSLADVWCRVN 289 F++ ++YYL L + D+ A +LE I SLA+ W ++N Sbjct: 537 FKNPADYYLDLV-TLDDLSAAAMLESSARIESLANAWDQIN 576 Database: fruitfly Posted date: Oct 5, 2007 11:13 AM Number of letters in database: 24,830,863 Number of sequences in database: 52,641 Lambda K H 0.319 0.137 0.397 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,111,309 Number of Sequences: 52641 Number of extensions: 743059 Number of successful extensions: 1585 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 8 Number of HSP's that attempted gapping in prelim test: 1570 Number of HSP's gapped (non-prelim): 21 length of query: 401 length of database: 24,830,863 effective HSP length: 87 effective length of query: 314 effective length of database: 20,251,096 effective search space: 6358844144 effective search space used: 6358844144 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.8 bits) S2: 63 (29.5 bits)
- SilkBase 1999-2023 -