Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001158-TA|BGIBMGA001158-PA|IPR010285|Protein of unknown
function DUF889, eukaryote
         (131 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    22   1.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   8.6  

>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
          monooxygenase protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 1.6
 Identities = 10/21 (47%), Positives = 12/21 (57%)

Query: 56 SELLTNMRNRDWLCERAILAP 76
          SE LTN+    W   RA L+P
Sbjct: 73 SEALTNLPGEKWKEMRATLSP 93


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 6/17 (35%), Positives = 10/17 (58%)

Query: 55  YSELLTNMRNRDWLCER 71
           Y E+   +RN+ W+  R
Sbjct: 906 YYEICNRIRNQRWIVNR 922


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.318    0.134    0.384 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,778
Number of Sequences: 317
Number of extensions: 996
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 131
length of database: 114,650
effective HSP length: 51
effective length of query: 80
effective length of database: 98,483
effective search space:  7878640
effective search space used:  7878640
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
S2: 39 (19.8 bits)