Silkworm BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001158-TA|BGIBMGA001158-PA|IPR010285|Protein of unknown
function DUF889, eukaryote
         (131 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL138762-3|CAH70950.1| 1173|Homo sapiens chromosome 10 open read...    28   8.4  
AL138762-2|CAH70949.1| 1186|Homo sapiens chromosome 10 open read...    28   8.4  
AL133215-19|CAI10933.1| 1173|Homo sapiens chromosome 10 open rea...    28   8.4  
AL133215-18|CAI10932.1| 1186|Homo sapiens chromosome 10 open rea...    28   8.4  
AK001374-1|BAA91657.1|  498|Homo sapiens protein ( Homo sapiens ...    28   8.4  
AF460991-1|AAN84475.1| 1173|Homo sapiens C10ORF6 protein.              28   8.4  

>AL138762-3|CAH70950.1| 1173|Homo sapiens chromosome 10 open reading
           frame 6 protein.
          Length = 1173

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 11/40 (27%), Positives = 24/40 (60%)

Query: 1   MRVQLHNDVQSGQYAAALLKIGEDRMAKDGNGMITLDREF 40
           ++ QL  D++ G+   + ++IGE+    D +G++   +EF
Sbjct: 685 LQKQLQEDIRQGRGIKSPIRIGEEDSTDDEDGLLEEHKEF 724


>AL138762-2|CAH70949.1| 1186|Homo sapiens chromosome 10 open reading
           frame 6 protein.
          Length = 1186

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 11/40 (27%), Positives = 24/40 (60%)

Query: 1   MRVQLHNDVQSGQYAAALLKIGEDRMAKDGNGMITLDREF 40
           ++ QL  D++ G+   + ++IGE+    D +G++   +EF
Sbjct: 685 LQKQLQEDIRQGRGIKSPIRIGEEDSTDDEDGLLEEHKEF 724


>AL133215-19|CAI10933.1| 1173|Homo sapiens chromosome 10 open
           reading frame 6 protein.
          Length = 1173

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 11/40 (27%), Positives = 24/40 (60%)

Query: 1   MRVQLHNDVQSGQYAAALLKIGEDRMAKDGNGMITLDREF 40
           ++ QL  D++ G+   + ++IGE+    D +G++   +EF
Sbjct: 685 LQKQLQEDIRQGRGIKSPIRIGEEDSTDDEDGLLEEHKEF 724


>AL133215-18|CAI10932.1| 1186|Homo sapiens chromosome 10 open
           reading frame 6 protein.
          Length = 1186

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 11/40 (27%), Positives = 24/40 (60%)

Query: 1   MRVQLHNDVQSGQYAAALLKIGEDRMAKDGNGMITLDREF 40
           ++ QL  D++ G+   + ++IGE+    D +G++   +EF
Sbjct: 685 LQKQLQEDIRQGRGIKSPIRIGEEDSTDDEDGLLEEHKEF 724


>AK001374-1|BAA91657.1|  498|Homo sapiens protein ( Homo sapiens
          cDNA FLJ10512 fis, clone NT2RP2000658. ).
          Length = 498

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 11/40 (27%), Positives = 24/40 (60%)

Query: 1  MRVQLHNDVQSGQYAAALLKIGEDRMAKDGNGMITLDREF 40
          ++ QL  D++ G+   + ++IGE+    D +G++   +EF
Sbjct: 10 LQKQLQEDIRQGRGIKSPIRIGEEDSTDDEDGLLEEHKEF 49


>AF460991-1|AAN84475.1| 1173|Homo sapiens C10ORF6 protein.
          Length = 1173

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 11/40 (27%), Positives = 24/40 (60%)

Query: 1   MRVQLHNDVQSGQYAAALLKIGEDRMAKDGNGMITLDREF 40
           ++ QL  D++ G+   + ++IGE+    D +G++   +EF
Sbjct: 685 LQKQLQEDIRQGRGIKSPIRIGEEDSTDDEDGLLEEHKEF 724


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.318    0.134    0.384 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,858,264
Number of Sequences: 224733
Number of extensions: 577592
Number of successful extensions: 1053
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1047
Number of HSP's gapped (non-prelim): 6
length of query: 131
length of database: 73,234,838
effective HSP length: 82
effective length of query: 49
effective length of database: 54,806,732
effective search space: 2685529868
effective search space used: 2685529868
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 60 (28.3 bits)