Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001158-TA|BGIBMGA001158-PA|IPR010285|Protein of unknown
function DUF889, eukaryote
(131 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g52960.1 68414.m05990 hypothetical protein very low similarit... 64 3e-11
At4g03916.1 68417.m00552 hypothetical protein low similarity to ... 63 7e-11
At3g31980.1 68416.m04050 hypothetical protein low similarity to ... 63 7e-11
At3g51700.1 68416.m05669 expressed protein 60 4e-10
At1g54430.1 68414.m06209 hypothetical protein 59 8e-10
At2g05080.1 68415.m00530 hypothetical protein low similarity to ... 59 1e-09
At3g30420.1 68416.m03847 hypothetical protein low similarity to ... 58 1e-09
At1g35940.1 68414.m04463 AT hook motif-containing protein-relate... 57 4e-09
At5g37110.1 68418.m04454 hypothetical protein 55 2e-08
At5g28780.1 68418.m03538 hypothetical protein various predicted ... 55 2e-08
At3g42100.1 68416.m04322 AT hook motif-containing protein-relate... 55 2e-08
At5g34960.1 68418.m04125 hypothetical protein includes At5g34960... 54 4e-08
At3g30560.1 68416.m03867 hypothetical protein 53 7e-08
At3g13250.1 68416.m01668 hypothetical protein low similarity to ... 50 5e-07
At3g43350.1 68416.m04582 helicase-related low similarity to SP|Q... 48 2e-06
At3g51690.1 68416.m05668 hypothetical protein low similarity to ... 46 6e-06
At3g42340.1 68416.m04375 hypothetical protein various predicted ... 46 8e-06
At1g64410.1 68414.m07301 hypothetical protein 35 0.015
At4g03690.1 68417.m00504 hypothetical protein very low similarit... 32 0.14
At5g62110.1 68418.m07796 hypothetical protein 30 0.58
At2g39360.1 68415.m04831 protein kinase family protein contains ... 30 0.58
At1g25360.1 68414.m03146 pentatricopeptide (PPR) repeat-containi... 29 1.0
At5g37190.1 68418.m04465 COP1-interacting protein 4 (CIP4) simil... 28 2.3
At5g44280.1 68418.m05420 zinc finger (C3HC4-type RING finger) fa... 27 4.1
At5g32070.1 68418.m03689 hypothetical protein 27 4.1
At5g21080.1 68418.m02510 expressed protein predicted proteins - ... 27 4.1
At3g24680.1 68416.m03099 zinc finger protein, putative identical... 27 4.1
At2g23050.1 68415.m02748 phototropic-responsive NPH3 family prot... 27 4.1
At4g34131.1 68417.m04841 UDP-glucoronosyl/UDP-glucosyl transfera... 27 5.4
At3g45840.1 68416.m04961 DC1 domain-containing protein contains ... 26 7.1
At1g60860.1 68414.m06851 ARF GTPase-activating domain-containing... 26 7.1
At1g70170.1 68414.m08074 matrixin family protein similar to SP|P... 26 9.4
>At1g52960.1 68414.m05990 hypothetical protein very low similarity
to SP|Q9UUA2 DNA repair and recombination protein pif1,
mitochondrial precursor {Schizosaccharomyces pombe}
Length = 996
Score = 64.1 bits (149), Expect = 3e-11
Identities = 40/121 (33%), Positives = 69/121 (57%), Gaps = 8/121 (6%)
Query: 18 LLKIGEDRMAK--DGNGMITLDREFC-NVVHNP-DDLNNFVYSELLTNMRNRDWLCERAI 73
+L +G+ ++++ DG +I + EF N ++P + + VY ++ + RAI
Sbjct: 750 ILDVGDGKISQPNDGIALIDIPEEFLINGDNDPVESIIEAVYGNTFMEEKDPKFFQGRAI 809
Query: 74 LAPTNEMVGQINEQIMSRVEGDIVEFLSVDTV--MDTEQVT--SYPVEFLNSLELSGVPS 129
L PTNE V INE +MS ++G+ +LS D++ DT +Y +FLNS+ +SG+P+
Sbjct: 810 LCPTNEDVNSINEHMMSMLDGEERIYLSSDSIDPADTSSANNDAYSADFLNSVRVSGLPN 869
Query: 130 H 130
H
Sbjct: 870 H 870
>At4g03916.1 68417.m00552 hypothetical protein low similarity to
SP|P07271 DNA repair and recombination protein PIF1,
mitochondrial precursor {Saccharomyces cerevisiae}
Length = 251
Score = 62.9 bits (146), Expect = 7e-11
Identities = 29/77 (37%), Positives = 56/77 (72%), Gaps = 4/77 (5%)
Query: 58 LLTNMRNRDWLCERAILAPTNEMVGQINEQIMSRVEGDIVEFLSVDTVMDTEQVTSY-PV 116
LL ++ ++ ERAIL+PTNE V IN++++ ++ G+ +++LS+D++ ++ + Y PV
Sbjct: 46 LLLENKDLKFIQERAILSPTNEDVNTINQRLLEKLPGEEIQYLSIDSIDLSDTTSEYNPV 105
Query: 117 ---EFLNSLELSGVPSH 130
+FLNS+++SG+P+H
Sbjct: 106 FTPDFLNSIKISGLPNH 122
>At3g31980.1 68416.m04050 hypothetical protein low similarity to
SP|P07271 DNA repair and recombination protein PIF1,
mitochondrial precursor {Saccharomyces cerevisiae}
Length = 1099
Score = 62.9 bits (146), Expect = 7e-11
Identities = 40/130 (30%), Positives = 75/130 (57%), Gaps = 12/130 (9%)
Query: 13 QYAAALLKIGEDRMAKDGNGMITLDREFCNVVHNPDD----LNNFVYSELLTNMRNRD-- 66
+++ LL +G+ R+++ +G + +D ++ + +D + VY +L N D
Sbjct: 820 EFSNWLLAVGDGRVSEPNDGEVLIDIPEELLIKDANDPIEAITKAVYGDLDLLQPNNDPK 879
Query: 67 WLCERAILAPTNEMVGQINEQIMSRVEGDIVEFLSVDTVMDTEQVTSY--PV---EFLNS 121
+ +RAIL P N V IN+ ++ ++ G++V +LS D++ D + S PV +FLNS
Sbjct: 880 FFQQRAILCPRNTDVNTINDIMLDKLNGELVTYLSADSI-DPQDAASLNNPVLTPDFLNS 938
Query: 122 LELSGVPSHN 131
++LSG+P+HN
Sbjct: 939 IKLSGLPNHN 948
>At3g51700.1 68416.m05669 expressed protein
Length = 344
Score = 60.5 bits (140), Expect = 4e-10
Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 9/133 (6%)
Query: 4 QLHNDVQSGQYAAALLKIGEDRMAKDGNGMITLD-REFCNVVHNPDDLNNFV---YSELL 59
++H + + + IG + + K +G +D E + D + V Y E
Sbjct: 51 KIHTTIDEA-FTKWITNIGGENINKPNDGETKIDIHEDLLITECKDPIKTIVDEVYGESF 109
Query: 60 TNMRNRDWLCERAILAPTNEMVGQINEQIMSRVEGDIVEFLSVDTVMDTEQVTS----YP 115
T N D+ ERAIL TN++ +IN+ ++S+++G+ + DT+ T + YP
Sbjct: 110 TESYNPDFYQERAILCHTNDVADEINDYMLSQLQGEETKCYGADTIYPTHASPNDKMLYP 169
Query: 116 VEFLNSLELSGVP 128
+EFLNS+++ G P
Sbjct: 170 LEFLNSIKIPGFP 182
>At1g54430.1 68414.m06209 hypothetical protein
Length = 1639
Score = 59.3 bits (137), Expect = 8e-10
Identities = 41/135 (30%), Positives = 72/135 (53%), Gaps = 18/135 (13%)
Query: 13 QYAAALLKIGEDRMAKDGNGMITLDREFCNVV----------HNP-DDLNNFVYSELLTN 61
++A +L++G+ + +G I D+E N++ NP + L V+ +
Sbjct: 1348 KFAEWILQVGDGEAPRKTHG-IDDDQEEDNIIIDKNLLLPETENPLEVLCRSVFPDFTNT 1406
Query: 62 MRNRDWLCERAILAPTNEMVGQINEQIMSRVEGDIVEFLSVDTVMDTEQVT------SYP 115
++ + L A+L P NE V +IN+ ++S+V G E+ S D++ E +T SYP
Sbjct: 1407 FQDLENLKGTAVLTPRNETVDEINDYLLSKVPGLAKEYFSADSIDRDEALTEEGFEMSYP 1466
Query: 116 VEFLNSLELSGVPSH 130
+E+LNSLE G+P+H
Sbjct: 1467 MEYLNSLEFPGLPAH 1481
>At2g05080.1 68415.m00530 hypothetical protein low similarity to
SP|Q9UUA2 DNA repair and recombination protein pif1,
mitochondrial precursor {Schizosaccharomyces pombe}
Length = 1238
Score = 58.8 bits (136), Expect = 1e-09
Identities = 41/130 (31%), Positives = 73/130 (56%), Gaps = 14/130 (10%)
Query: 13 QYAAALLKIGEDRMAK--DGNGMITLDREFCNVVHNPDDLNNF---VYSELLTNMRNRD- 66
+++ +L +G+ R+ + DG +I + EF + D + +Y ++ +D
Sbjct: 1053 EFSEWILAVGDGRIGEPNDGEALIDIPSEFL-ITKAKDPIQAICTEIYGDITKIHEQKDP 1111
Query: 67 -WLCERAILAPTNEMVGQINEQIMSRVEGDIVEFLSVDTVMDTEQVTS--YPV---EFLN 120
+ ERAIL PTNE V QINE ++ ++G+ + FLS D+ +DT + S PV EFLN
Sbjct: 1112 VFFQERAILCPTNEDVNQINETMLDNLQGEELTFLSSDS-LDTADIGSRNNPVLTPEFLN 1170
Query: 121 SLELSGVPSH 130
++++ G+ +H
Sbjct: 1171 NVKVLGLSNH 1180
>At3g30420.1 68416.m03847 hypothetical protein low similarity to
SP|Q9UUA2 DNA repair and recombination protein pif1,
mitochondrial precursor {Schizosaccharomyces pombe}
Length = 837
Score = 58.4 bits (135), Expect = 1e-09
Identities = 42/135 (31%), Positives = 71/135 (52%), Gaps = 18/135 (13%)
Query: 13 QYAAALLKIGEDRMAKDGNGMITLDREFCNVV----------HNP-DDLNNFVYSELLTN 61
++A +L+IG+ + +G I D+E N++ NP + L V +
Sbjct: 546 KFAEWILQIGDGEAPRKTHG-IDDDQEEDNIIIDKNLLLPETENPLEVLCQSVSPDFTNT 604
Query: 62 MRNRDWLCERAILAPTNEMVGQINEQIMSRVEGDIVEFLSVDTVMDTEQVT------SYP 115
++ + L A+L P NE V +IN+ ++S+V G E+ S D++ E +T SYP
Sbjct: 605 FQDLENLKGTAVLTPRNETVDEINDYLLSKVPGLAKEYFSADSIDQDEALTEEGFEMSYP 664
Query: 116 VEFLNSLELSGVPSH 130
+E+LNSLE G+P+H
Sbjct: 665 MEYLNSLEFPGLPAH 679
>At1g35940.1 68414.m04463 AT hook motif-containing protein-related
very low similarity to SP|Q9UUA2 DNA repair and
recombination protein pif1, mitochondrial precursor
{Schizosaccharomyces pombe}; contains weak hit to
PF02178: AT hook motif
Length = 1678
Score = 56.8 bits (131), Expect = 4e-09
Identities = 37/129 (28%), Positives = 74/129 (57%), Gaps = 10/129 (7%)
Query: 13 QYAAALLKIGEDRMAKDGNGMITLDREFCNVVHNPDD----LNNFVYSE--LLTNMRNRD 66
+++ LL + + R+ + +G+ T+D ++ N D + N +Y + +L + +
Sbjct: 1400 EFSDWLLAVSDGRINEPNDGVATIDIPEDLLITNADKPIETITNEIYGDPKILHEITDPK 1459
Query: 67 WLCERAILAPTNEMVGQINEQIMSRVEGDIVEFLSVDTVMDTEQVT-SYPV---EFLNSL 122
+ RAILAP NE V INE ++ +++ + +LS D++ T+ + + PV +FLNS+
Sbjct: 1460 FFQGRAILAPKNEDVNTINEYLLEQLDAEERIYLSADSIDPTDSDSLNNPVITPDFLNSI 1519
Query: 123 ELSGVPSHN 131
+L G+P+H+
Sbjct: 1520 KLPGLPNHS 1528
>At5g37110.1 68418.m04454 hypothetical protein
Length = 1307
Score = 54.8 bits (126), Expect = 2e-08
Identities = 36/128 (28%), Positives = 70/128 (54%), Gaps = 10/128 (7%)
Query: 13 QYAAALLKIGEDRMAK--DGNGMITLDREFC-NVVHNP-DDLNNFVYSELLTNMRNRD-- 66
+++ +L +G+ R+ + DG +I + EF +P + + +Y ++ D
Sbjct: 1040 EFSEWILAVGDGRIVEPNDGEALIVIPSEFLITKAKDPIEAICTEIYGDITKIHEQNDPI 1099
Query: 67 WLCERAILAPTNEMVGQINEQIMSRVEGDIVEFLSVDTV----MDTEQVTSYPVEFLNSL 122
+ E+AIL PTNE V QINE ++ ++G+ FLS D++ + + + +FLNS+
Sbjct: 1100 FFQEKAILCPTNEDVNQINETMLDNLQGEEFTFLSSDSLDPADIGGKNNPALTPDFLNSV 1159
Query: 123 ELSGVPSH 130
++S +P+H
Sbjct: 1160 KVSRLPNH 1167
>At5g28780.1 68418.m03538 hypothetical protein various predicted
proteins, Arabidopsis thaliana
Length = 337
Score = 54.8 bits (126), Expect = 2e-08
Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 9/110 (8%)
Query: 29 DGNGMITLDREFCNVVHNPDDLNNFV---YSELLTNMRNRDWLCERAILAPTNEMVGQIN 85
D ++ +D F + HN + L Y + + N +L ER IL P NE V +IN
Sbjct: 74 DDGEVVEMDTSFF-LKHNGNRLQQVTKGAYVQFSVSQPNFQYLTERGILTPHNEYVDEIN 132
Query: 86 EQIMSRVEGDIVEFLSVDTVMDTEQVTS-----YPVEFLNSLELSGVPSH 130
++S+V GD E+LS ++ + + + Y V++LNSLE +P H
Sbjct: 133 AYMLSQVGGDSKEYLSSYSIGKADTIGADYEALYHVKYLNSLEFPSLPKH 182
>At3g42100.1 68416.m04322 AT hook motif-containing protein-related
very low similarity to SP|Q9UUA2 DNA repair and
recombination protein pif1, mitochondrial precursor
{Schizosaccharomyces pombe}; weak hit to Pfam profile
PF02178: AT hook motif
Length = 1752
Score = 54.8 bits (126), Expect = 2e-08
Identities = 39/128 (30%), Positives = 72/128 (56%), Gaps = 10/128 (7%)
Query: 13 QYAAALLKIGEDRMAK--DGNGMITLDREFC-NVVHNP-DDLNNFVYSEL--LTNMRNRD 66
Q++ LL +G+ R+ + DG +I + E NP + ++ +Y + L + +
Sbjct: 1474 QFSDWLLAVGDGRINEPNDGEALIDIPEELLIKEAGNPIEAISKEIYGDPSELHMINDPK 1533
Query: 67 WLCERAILAPTNEMVGQINEQIMSRVEGDIVEFLSVDTVMDTEQVT-SYPV---EFLNSL 122
+ RAILAPTNE V IN+ ++ ++ + +LS D++ T+ + + PV +FLNS+
Sbjct: 1534 FFQRRAILAPTNEDVNTINQYMLEHLKSEERIYLSADSIDPTDSDSLANPVITPDFLNSI 1593
Query: 123 ELSGVPSH 130
+L+G+P H
Sbjct: 1594 QLTGMPHH 1601
>At5g34960.1 68418.m04125 hypothetical protein includes At5g34960,
At2g14450, At1g35920
Length = 1033
Score = 53.6 bits (123), Expect = 4e-08
Identities = 38/122 (31%), Positives = 68/122 (55%), Gaps = 11/122 (9%)
Query: 18 LLKIGEDRMAKDGNGMITLDREFC--NVVHNPDDLNNFVYSE--LLTNMRNRDWLCERAI 73
+LKI E DG +I + + N + + N +Y + +L + + + RAI
Sbjct: 765 VLKINEPN---DGVAIIDIPEDLLITNTDKPIESITNEIYGDPKILHEITDPKFFQGRAI 821
Query: 74 LAPTNEMVGQINEQIMSRVEGDIVEFLSVDTVMDTEQVT-SYPV---EFLNSLELSGVPS 129
LAPTNE V INE ++ ++ + +LS D++ T+ + + PV +FLNS++L+G+P+
Sbjct: 822 LAPTNEDVNTINEYLLEQLHAEERIYLSADSIDPTDSNSLNNPVITPDFLNSIKLAGLPN 881
Query: 130 HN 131
H+
Sbjct: 882 HS 883
>At3g30560.1 68416.m03867 hypothetical protein
Length = 1473
Score = 52.8 bits (121), Expect = 7e-08
Identities = 34/121 (28%), Positives = 67/121 (55%), Gaps = 8/121 (6%)
Query: 18 LLKIGEDRMAKDGNGMITLD-REFCNVVH--NP-DDLNNFVYSELLTNMRNRDWLCERAI 73
+L +GE ++ + +G+ + R+ + NP + + VY R+ + +RAI
Sbjct: 1203 ILAVGEGKLNQPNDGVTQIQIRDDILIPEGDNPIESIIKAVYGTSFDEERDPKFFQDRAI 1262
Query: 74 LAPTNEMVGQINEQIMSRVEGDIVEFLSVDTV--MDT--EQVTSYPVEFLNSLELSGVPS 129
L PTN+ V IN+ ++S++ G+ + S D++ DT ++ Y +FLN +++SG+P+
Sbjct: 1263 LCPTNDDVNSINDHMLSKLTGEEKIYRSSDSIDPSDTRADKNPVYTPDFLNKIKISGLPN 1322
Query: 130 H 130
H
Sbjct: 1323 H 1323
>At3g13250.1 68416.m01668 hypothetical protein low similarity to
SP|P07271 DNA repair and recombination protein PIF1,
mitochondrial precursor {Saccharomyces cerevisiae}
Length = 1419
Score = 50.0 bits (114), Expect = 5e-07
Identities = 35/130 (26%), Positives = 72/130 (55%), Gaps = 12/130 (9%)
Query: 13 QYAAALLKIGEDRMAKDGNGMITLD---REFCNVVHNP-DDLNNFVYSE--LLTNMRNRD 66
+++ LL +G+ R+ + +G + +D NP + ++ +Y + L + +
Sbjct: 1142 EFSDWLLAVGDGRVNEPNDGEVIIDIPEELLIQEADNPIEAISREIYGDPTKLHEISDPK 1201
Query: 67 WLCERAILAPTNEMVGQINEQIMSRVEGDIVEFLSVDTV--MDTEQVTSYPV---EFLNS 121
+ RAILAP NE V IN+ ++ ++ + +LS D++ D++ + + PV +FLNS
Sbjct: 1202 FFQRRAILAPKNEDVNTINQYMLEHLDSEERIYLSADSIDPSDSDSLKN-PVITPDFLNS 1260
Query: 122 LELSGVPSHN 131
+++SG+P H+
Sbjct: 1261 IKVSGMPHHS 1270
>At3g43350.1 68416.m04582 helicase-related low similarity to
SP|Q9UUA2 DNA repair and recombination protein pif1,
mitochondrial precursor {Schizosaccharomyces pombe}
Length = 830
Score = 48.4 bits (110), Expect = 2e-06
Identities = 36/126 (28%), Positives = 68/126 (53%), Gaps = 13/126 (10%)
Query: 18 LLKIGEDRMAK--DGNGMITLDREFC-NVVHNP-DDLNNFVYSELLTNMRN---RDW--L 68
+L +G+ ++++ DG +I + EF N ++P + + VY ++ D+
Sbjct: 382 ILDVGDGKISQPNDGIALIDIPEEFLINGDNDPVESIIEAVYGNTFMEEKDPKKTDYPQY 441
Query: 69 CERAILAPTNEMVGQINEQIMSRVEGDIVEFLSVDTV----MDTEQVTSYPVEFLNSLEL 124
RAIL PTNE V INE +M ++G+ +LS D++ + + +Y +FLN++ +
Sbjct: 442 QGRAILCPTNEDVNSINEHMMRMLDGEERIYLSSDSIDPADISSANNAAYLADFLNNVRV 501
Query: 125 SGVPSH 130
G+P+H
Sbjct: 502 YGLPNH 507
>At3g51690.1 68416.m05668 hypothetical protein low similarity to
SP|P07271 DNA repair and recombination protein PIF1,
mitochondrial precursor {Saccharomyces cerevisiae}
Length = 374
Score = 46.4 bits (105), Expect = 6e-06
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 54 VYSELLTNMRNRDWLCERAILAPTNEMVGQINEQIMSRVEGDIVEFLSVDTVMDTEQVTS 113
VY E N D+ + AIL ++ V QIN+ ++S + G+ E LS D++ +
Sbjct: 103 VYGEYFAKSYNPDFCHDSAILCHRDDDVDQINDYMLSLLPGEEKECLSTDSISPSPNDDM 162
Query: 114 Y-PVEFLNSLELSGVP 128
+ P+E LNS+++ G+P
Sbjct: 163 FVPLEVLNSIKVPGLP 178
>At3g42340.1 68416.m04375 hypothetical protein various predicted
Helicases, Arabidopsis thaliana
Length = 244
Score = 46.0 bits (104), Expect = 8e-06
Identities = 28/92 (30%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Query: 18 LLKIGEDRMAKDGNGMITLD-RE--FCNVVHNP-DDLNNFVYSELLTNMRNRDWLCERAI 73
+L +G+ ++++ G+ +D RE F N ++P + + VY ++R + R I
Sbjct: 96 ILDVGDGKISQCNEGISLIDIREEFFINGDNDPVESIIEAVYGNTFMEEKDRKFFQGRVI 155
Query: 74 LAPTNEMVGQINEQIMSRVEGDIVEFLSVDTV 105
L PTNE V INE +MS ++G+ +LS +++
Sbjct: 156 LCPTNEDVNSINEHMMSMLDGEERIYLSSNSI 187
>At1g64410.1 68414.m07301 hypothetical protein
Length = 1231
Score = 35.1 bits (77), Expect = 0.015
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Query: 54 VYSELLTNMRNRDWLCERAILAPTNEMVGQINEQIMSRVEGDIVEFLS-VDTVMDTEQVT 112
VY ++ + RAIL PTNE V I R + V + DT +
Sbjct: 1016 VYGNTFMEEKDPKFFQGRAILCPTNEDVNSIK-----RAYDEYVRCIDPADT--SSANND 1068
Query: 113 SYPVEFLNSLELSGVPSH 130
+Y +FLNS+ +SG+P+H
Sbjct: 1069 AYSADFLNSVRVSGLPNH 1086
>At4g03690.1 68417.m00504 hypothetical protein very low similarity
to SP|Q9UUA2 DNA repair and recombination protein pif1,
mitochondrial precursor {Schizosaccharomyces pombe}
Length = 570
Score = 31.9 bits (69), Expect = 0.14
Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 46 NP-DDLNNFVYSELLTNMRNRDWLCERAILAPTNEMVGQINEQIMSRV 92
NP + + VY + ++ + +RAIL PTN+ V IN+ ++S++
Sbjct: 380 NPIESIIKCVYGTIFAQEKSLTFFQDRAILCPTNDDVNLINDHMLSKL 427
>At5g62110.1 68418.m07796 hypothetical protein
Length = 691
Score = 29.9 bits (64), Expect = 0.58
Identities = 28/130 (21%), Positives = 54/130 (41%), Gaps = 4/130 (3%)
Query: 2 RVQLHNDVQSGQYAAAL-LKIGEDRMAKDGNGMITLDREFCNVVHNPDDLNNFVYSELLT 60
RV ++ +V GQ ++ E+ M+ G+ F + N +EL+
Sbjct: 300 RVNVNGNVSLGQNLGSMNWNFDENNMSNHGSSTSRFSSPFSSFEDQSLSHLNEETNELVP 359
Query: 61 NMRNRDWLCERAILAPT--NEMVGQ-INEQIMSRVEGDIVEFLSVDTVMDTEQVTSYPVE 117
+ N + + P N + + Q V + +EF + D + E +T+Y VE
Sbjct: 360 GLENLSLYNDHQSINPFLGNTINSHFVENQDQGLVNNENLEFANDDQLERNEILTTYSVE 419
Query: 118 FLNSLELSGV 127
+N+L ++ V
Sbjct: 420 DINNLSINNV 429
>At2g39360.1 68415.m04831 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 815
Score = 29.9 bits (64), Expect = 0.58
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 9/89 (10%)
Query: 40 FCNVVHNPDDLNNFVYSELLTNMRNRDWLCERAILAPTNE---MVGQINEQIMSRVEGDI 96
FCN++ +P + ++ N + +L T V + + SR EG +
Sbjct: 296 FCNIIVDPFGFERQIRFDIFVNSEKVRTIDMTEVLNGTFGAPFFVDAVMRKAKSR-EGFL 354
Query: 97 VEFLSVDTVMDTEQVTSYPVEFLNSLELS 125
LS+ VMD V+SYPV F+N E+S
Sbjct: 355 N--LSIGLVMD---VSSYPVSFINGFEIS 378
>At1g25360.1 68414.m03146 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 790
Score = 29.1 bits (62), Expect = 1.0
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 13 QYAAALLKIGEDRMAKDGNGMITLDREFCNVV 44
QY A LLKIG D GN +IT+ + C VV
Sbjct: 438 QYHAQLLKIGFDSSLSAGNALITMYAK-CGVV 468
>At5g37190.1 68418.m04465 COP1-interacting protein 4 (CIP4) similar
to COP1-interacting protein 4 (CIP4) [Arabidopsis
thaliana] GI:13160646; supporting cDNA
gi|13160645|dbj|AB036832.1|;
Length = 876
Score = 27.9 bits (59), Expect = 2.3
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Query: 48 DDLNNFVYSELLTNMRNRD--WLCERAILAPTNEMV-GQINEQIMSRVEGDIVEFLSVDT 104
DDL + +L + D + + L P +++V GQI Q+ R EG + +VD
Sbjct: 274 DDLTGTIEQDLEKGGKTADIVMIDQEKDLPPASKLVDGQITSQVDERGEGRRLAPSAVDN 333
Query: 105 VMDTEQVTSYPVEFLNSLELSGVPS 129
+ E VT+ + S L+ P+
Sbjct: 334 LQTAEVVTNVDNQLEASSSLTTGPA 358
>At5g44280.1 68418.m05420 zinc finger (C3HC4-type RING finger)
family protein contains similarity to polycomb-M33
interacting protein Ring1B [Mus musculus] GI:2239142;
contains Pfam profile PF00097: Zinc finger, C3HC4 type
(RING finger)
Length = 486
Score = 27.1 bits (57), Expect = 4.1
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 78 NEMVGQINEQIMSRVEGDIVEFLSVDTVMDTEQV 111
N V ++ E + S V+G VEF+++ + TE+V
Sbjct: 386 NARVNKLVEYLRSSVDGSSVEFVALQIHLKTEEV 419
>At5g32070.1 68418.m03689 hypothetical protein
Length = 339
Score = 27.1 bits (57), Expect = 4.1
Identities = 14/54 (25%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
Query: 81 VGQINEQIMSRVEGDIVEFLSVDTV--MDTEQVTSYPV--EFLNSLELSGVPSH 130
+ Q ++ +++ +G+ +LS D++ D++ + + + +FLNS++LSG+ H
Sbjct: 144 IQQFSDWLLAIGDGEERIYLSADSIDPTDSDSLANSVITPDFLNSIKLSGLAHH 197
>At5g21080.1 68418.m02510 expressed protein predicted proteins -
Arabidopsis thaliana; expression supported by MPSS
Length = 980
Score = 27.1 bits (57), Expect = 4.1
Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 79 EMVGQINEQIMSRVEGDIV-EFLSVDTVMDTEQVTSYPVEFLNSLELSGVPSHN 131
+ +G++++Q S ++ +V +F+ +D Q+T PV+ S E + P N
Sbjct: 763 KFLGKLSDQESSAIKEQLVSDFIPIDGCPVGTQLTESPVQVYRSEEKNNKPREN 816
>At3g24680.1 68416.m03099 zinc finger protein, putative identical to
zinc-finger protein GI:976277 from [Arabidopsis
thaliana]
Length = 487
Score = 27.1 bits (57), Expect = 4.1
Identities = 19/77 (24%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 34 ITLDREFCNVVHNPDDLNNFVYSELLTNMRNRDWLCERAILAPTNEMVGQINEQIMSRVE 93
I +DR + N PDD F+ + ++ E+AI +++G++ E + + VE
Sbjct: 104 IVVDRWYENP---PDDYLRFMLVWVQIWNIPVNYYTEKAI-TKLGDLIGEVKEVVFNPVE 159
Query: 94 GDIVEFLSVDTVMDTEQ 110
+ EF+ V+ + D +
Sbjct: 160 PQLHEFVRVNVLFDVSR 176
>At2g23050.1 68415.m02748 phototropic-responsive NPH3 family protein
contains NPH3 family domain, Pfam:PF03000
Length = 481
Score = 27.1 bits (57), Expect = 4.1
Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Query: 51 NNFVYS--ELLTNMRNRDWLCERAILAPTNEMVGQINEQIMSRVEGDIVEFLSVDT 104
+N VY L + R W +L T +++ +E+++ R G I S+DT
Sbjct: 124 SNLVYKIDVFLNSTIFRSWKDSIIVLQTTKDLLSDDSEELVKRCLGSIASTASIDT 179
>At4g34131.1 68417.m04841 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 481
Score = 26.6 bits (56), Expect = 5.4
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 20 KIGEDRMAKDGNGMITLDREFCNVVHNPDDL 50
K R+ G G +L E+C VHNP ++
Sbjct: 144 KFNVPRLVFHGTGYFSLCSEYCIRVHNPQNI 174
>At3g45840.1 68416.m04961 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 633
Score = 26.2 bits (55), Expect = 7.1
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 55 YSELLTNMRNRDWLCERAILAPTNEMVGQINEQIMSRVEGDIVEFLSVDTVMDTEQVTSY 114
+S L +R+ L ++++ N M+ I + R+E F+ V+ ++ TSY
Sbjct: 220 FSMCLNCVRSPPPLTAKSLIYVFNVMLWSIEVVLAYRIESVSWGFICPKYVVHSQCATSY 279
Query: 115 PVEFLNSLELSGVP 128
V + +EL G+P
Sbjct: 280 NV--WDGIELEGIP 291
>At1g60860.1 68414.m06851 ARF GTPase-activating domain-containing
protein
Length = 776
Score = 26.2 bits (55), Expect = 7.1
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Query: 2 RVQLHNDVQSGQ--YAAALLKIGEDRMAKDGNGMITLDR 38
R LH+ + SG +A LL+ G +DG G+ L+R
Sbjct: 718 RTPLHHCIASGNNAFAKVLLRRGARPSIEDGGGLSVLER 756
>At1g70170.1 68414.m08074 matrixin family protein similar to
SP|P29136 Metalloendoproteinase 1 precursor (EC
3.4.24.-) (SMEP1) {Glycine max}; contains InterPro
accession IPR001818: Matrixin
Length = 378
Score = 25.8 bits (54), Expect = 9.4
Identities = 14/36 (38%), Positives = 18/36 (50%)
Query: 92 VEGDIVEFLSVDTVMDTEQVTSYPVEFLNSLELSGV 127
V GD+ FLSV +D E V + + L L S V
Sbjct: 258 VSGDLDSFLSVTAAVDLESVAVHEIGHLLGLGHSSV 293
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.384
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,912,530
Number of Sequences: 28952
Number of extensions: 109783
Number of successful extensions: 262
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 220
Number of HSP's gapped (non-prelim): 33
length of query: 131
length of database: 12,070,560
effective HSP length: 74
effective length of query: 57
effective length of database: 9,928,112
effective search space: 565902384
effective search space used: 565902384
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 54 (25.8 bits)
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