Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001158-TA|BGIBMGA001158-PA|IPR010285|Protein of unknown
function DUF889, eukaryote
(131 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_02_0129 + 5584585-5584732,5586567-5586968,5587038-5587106,558... 64 4e-11
11_06_0460 + 23836034-23836083,23836175-23836318,23836397-238364... 56 7e-09
04_03_0536 - 16875813-16876087,16877023-16877091,16877134-168772... 56 7e-09
03_05_0351 - 23382786-23382821,23383373-23383634,23384369-233856... 52 1e-07
02_02_0352 - 9271311-9271540,9272034-9272353,9272808-9273178 50 8e-07
10_08_0260 - 16290798-16290893,16292284-16292570,16293248-162939... 49 1e-06
09_02_0133 + 4707944-4708308,4708320-4708534,4708626-4708672,470... 48 2e-06
02_03_0026 - 14045653-14045874,14047023-14047215,14047518-140476... 48 2e-06
01_05_0799 + 25334460-25334994,25335060-25335236,25335325-253354... 48 2e-06
08_02_0855 - 21913291-21913347,21914117-21914211,21915077-219151... 46 1e-05
08_01_1082 - 11073874-11073988,11074072-11074133,11074217-110745... 46 1e-05
01_06_0058 - 26056334-26056630,26057063-26057365,26057748-260578... 44 5e-05
09_01_0179 - 2627682-2628086 40 5e-04
10_08_0263 - 16311650-16311675,16312101-16312149,16312987-163131... 40 7e-04
01_05_0444 + 22298490-22298598,22299847-22300108,22302420-223025... 38 0.003
08_01_0087 + 630355-630403,630502-630699,631858-631943,632238-63... 37 0.005
05_03_0254 + 11089236-11089290,11089366-11089415,11089530-110895... 30 0.53
06_03_0619 + 22801576-22802016,22802111-22802596 29 1.6
03_01_0118 - 929956-929988,930059-930145,930230-930331,930515-93... 27 4.9
09_03_0137 + 12667763-12667930,12668715-12668779,12668879-126689... 26 8.6
>10_02_0129 + 5584585-5584732,5586567-5586968,5587038-5587106,
5587181-5587234,5587309-5588214,5588313-5590283,
5590833-5591235,5591845-5591857
Length = 1321
Score = 64.1 bits (149), Expect = 4e-11
Identities = 43/113 (38%), Positives = 61/113 (53%), Gaps = 6/113 (5%)
Query: 22 GEDRMAKDGNGMITLDREFC-NVVHNPDDLNNF---VYSELLTNMRNRDWLCERAILAPT 77
G+ A D +G I L E C N DDLNN V+ L N+ + +++ RAIL+
Sbjct: 1181 GQGEEACD-DGYIRLPDEICVPCTGNDDDLNNLIDNVFPMLDANLADPNYITSRAILSTR 1239
Query: 78 NEMVGQINEQIMSRVEGDIVEFLSVDTVMDTEQVTSYPVEFLNSLELSGVPSH 130
NE V QIN +++ R G+ + + S D D + YP EFLNSL +G+P H
Sbjct: 1240 NEYVDQINMKMIDRFRGEEMLYHSFDRAED-DPHNYYPPEFLNSLTPNGLPPH 1291
>11_06_0460 +
23836034-23836083,23836175-23836318,23836397-23836480,
23836695-23836838,23836928-23836978,23837070-23837150,
23837366-23837509,23837599-23837649,23837738-23838056,
23839994-23840062,23840378-23840698,23841218-23841583,
23842241-23842304,23842569-23842690
Length = 669
Score = 56.4 bits (130), Expect = 7e-09
Identities = 36/113 (31%), Positives = 62/113 (54%), Gaps = 4/113 (3%)
Query: 10 QSGQYAAALLKIGEDRMAK-DGNGMITL-DREFCNVVHNP-DDLNNFVYSELLTNMRNRD 66
++ +A ++ IG+ + DG I + D +P +++ +Y L+ N + RD
Sbjct: 511 RTADFAQWIVNIGDGKTTSADGEEWIEIPDDLILKKGGDPKEEIVKSIYPNLVQNYKKRD 570
Query: 67 WLCERAILAPTNEMVGQINEQIMSRVEGDIVEFLSVDTVMDTEQVTSYPVEFL 119
+L +RAIL P NE +INE IM+ +EG+ + +LS DT + + T+Y E L
Sbjct: 571 FLEQRAILCPRNETAREINEFIMNMIEGEEITYLSCDT-YNIDCATTYSSERL 622
>04_03_0536 -
16875813-16876087,16877023-16877091,16877134-16877292,
16877307-16877636,16878764-16879030,16880033-16880077,
16880159-16880261
Length = 415
Score = 56.4 bits (130), Expect = 7e-09
Identities = 38/109 (34%), Positives = 65/109 (59%), Gaps = 12/109 (11%)
Query: 20 KIGEDRMAKDGNGMITLDREFCNVVHNPDDLNNFVYSEL-LTNMRNRDWLCERAILAPTN 78
++GED M + G+ + L E N+ L +FVY+E +++M + CERAILAPTN
Sbjct: 313 RMGEDYMHRIGHRYLLLPPESRNI----SSLVSFVYNESSISDMVA--YFCERAILAPTN 366
Query: 79 EMVGQINEQIMSRVEGDIVEFLSVDTVMDT--EQVT---SYPVEFLNSL 122
++ +IN ++S++ + + + S D + D+ + T YPVEFLN++
Sbjct: 367 DIAAEINSHMISQLPTEQMSYYSSDIIDDSTANRATLEAFYPVEFLNTI 415
>03_05_0351 - 23382786-23382821,23383373-23383634,23384369-23385675,
23385776-23386290,23386379-23386741,23386916-23387284,
23387365-23388057,23388152-23388238,23388354-23388612
Length = 1296
Score = 52.4 bits (120), Expect = 1e-07
Identities = 26/61 (42%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 70 ERAILAPTNEMVGQINEQIMSRVEGDIVEFLSVDTVMDTEQVTSYPVEFLNSLELSGVPS 129
+RAIL+ NE V +IN +++ R GD++ + S D D + YP EFLNSL +G+P
Sbjct: 1197 QRAILSTRNEFVDRINMKMIERFRGDVMTYHSFDRA-DDDPHNYYPPEFLNSLTPNGLPP 1255
Query: 130 H 130
H
Sbjct: 1256 H 1256
>02_02_0352 - 9271311-9271540,9272034-9272353,9272808-9273178
Length = 306
Score = 49.6 bits (113), Expect = 8e-07
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 71 RAILAPTNEMVGQINEQIMSRVEGDIVEFLSVDTVMDTEQVTSYPVEFLNSLELSGVPSH 130
+ I++ NE V +IN +++ R G++V + S D D + YP EFLNSL L+G+P H
Sbjct: 124 QTIMSTRNEFVDRINMKMIGRFRGEVVTYHSFDRPED-DPYNYYPPEFLNSLTLNGLPPH 182
>10_08_0260 -
16290798-16290893,16292284-16292570,16293248-16293901,
16294999-16295546,16295900-16295961,16296062-16296481
Length = 688
Score = 48.8 bits (111), Expect = 1e-06
Identities = 29/91 (31%), Positives = 51/91 (56%), Gaps = 7/91 (7%)
Query: 10 QSGQYAAALLKIGE-DRMAKDGNGMITLDREFCNVVHNPDD----LNNFVYSELLTNMRN 64
+S ++A +L+IG D ++ D G + + + ++ DD + Y +L N
Sbjct: 568 KSAEFAEWILQIGNGDTISLDEKGWVRMPSDL--LLQKGDDPKAQIIESTYPDLQDNCCK 625
Query: 65 RDWLCERAILAPTNEMVGQINEQIMSRVEGD 95
+++L ERAIL P NE V ++NE IM +++GD
Sbjct: 626 QNYLEERAILCPVNENVNELNEYIMDQIQGD 656
>09_02_0133 +
4707944-4708308,4708320-4708534,4708626-4708672,
4708997-4709393,4710042-4710608,4710708-4710838,
4711274-4711747
Length = 731
Score = 48.4 bits (110), Expect = 2e-06
Identities = 24/70 (34%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 61 NMRNRDWLCERAILAPTNEMVGQINEQIMSRVEGDIVEFLSVDTVMDTEQVTSYPVEFLN 120
N + +++ RAIL+ N+ V ++N +++ R G +LS D+V D Q SY ++FLN
Sbjct: 652 NTTSVEYMSTRAILSTKNDFVDKLNTKMIDRFPGKEKIYLSFDSVDDDPQ-NSYSLDFLN 710
Query: 121 SLELSGVPSH 130
++ +G+P H
Sbjct: 711 TITPNGLPPH 720
>02_03_0026 - 14045653-14045874,14047023-14047215,14047518-14047618,
14050145-14050272,14050409-14050502,14050749-14051237,
14052622-14052915,14053602-14053732,14053829-14055440,
14055539-14055651,14055902-14056933,14057023-14057145,
14057250-14057688
Length = 1656
Score = 48.4 bits (110), Expect = 2e-06
Identities = 25/98 (25%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Query: 34 ITLDREFCNVVHNPDDLNNFVYSELL-TNMRNRDWLCERAILAPTNEMVGQINEQIMSRV 92
+ +D++ ++ + +D + E++ N + ++ RAIL+ N+ V ++N ++ R
Sbjct: 1123 VLVDQDHLDIYTSLNDEQRAGFDEIIDNNASSASYMSTRAILSTKNDYVDKLNANMIDRF 1182
Query: 93 EGDIVEFLSVDTVMDTEQVTSYPVEFLNSLELSGVPSH 130
+ S D+V D + SYP+++LNS+ +G+P H
Sbjct: 1183 PVQAKVYHSFDSV-DDDPHNSYPLDYLNSITPNGLPPH 1219
>01_05_0799 + 25334460-25334994,25335060-25335236,25335325-25335447,
25335559-25335624,25335717-25336685,25336791-25336912,
25337156-25337549,25337888-25338009,25338253-25338646,
25338983-25339104,25339348-25339830,25340291-25340960,
25341713-25342224,25342484-25342540
Length = 1581
Score = 48.4 bits (110), Expect = 2e-06
Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 7/119 (5%)
Query: 18 LLKIGEDRMAKDGNGMITLDREFC-NVVHNPDDLNN---FVYSEL--LTNMRNRDWLCER 71
LL+IG + + L E + N D +N +V+ L N + +++ R
Sbjct: 1395 LLRIGNGTKNTIVDDYVRLPDEIVIGYLDNEDSVNTLIEYVFPSLDDERNTTSVEYMSTR 1454
Query: 72 AILAPTNEMVGQINEQIMSRVEGDIVEFLSVDTVMDTEQVTSYPVEFLNSLELSGVPSH 130
AIL+ N+ V ++N +++ R G + S D++ D Q SYP++FLN++ +G+P H
Sbjct: 1455 AILSTKNDFVDKLNMKMIDRFPGKEKIYHSFDSIDDDTQ-NSYPLDFLNTITPNGLPPH 1512
>08_02_0855 -
21913291-21913347,21914117-21914211,21915077-21915165,
21915449-21915507,21917872-21918160,21918307-21918398,
21918495-21918621,21918730-21918811,21919265-21919541,
21919647-21919812,21920519-21920847
Length = 553
Score = 46.0 bits (104), Expect = 1e-05
Identities = 21/47 (44%), Positives = 32/47 (68%)
Query: 46 NPDDLNNFVYSELLTNMRNRDWLCERAILAPTNEMVGQINEQIMSRV 92
N D L +FVY R +LCERAILAPTN++V +IN ++++++
Sbjct: 59 NLDGLISFVYDSGCQTTDLRSYLCERAILAPTNDVVSEINNKMIAQL 105
>08_01_1082 -
11073874-11073988,11074072-11074133,11074217-11074505,
11074652-11074743,11074840-11074966,11075075-11075156,
11075611-11075887,11075993-11076158,11076874-11077202
Length = 512
Score = 46.0 bits (104), Expect = 1e-05
Identities = 21/47 (44%), Positives = 32/47 (68%)
Query: 46 NPDDLNNFVYSELLTNMRNRDWLCERAILAPTNEMVGQINEQIMSRV 92
N D L +FVY R +LCERAILAPTN++V +IN ++++++
Sbjct: 59 NLDGLISFVYDSGCQTTDLRSYLCERAILAPTNDVVSEINNKMIAQL 105
>01_06_0058 - 26056334-26056630,26057063-26057365,26057748-26057891,
26057947-26058702,26058844-26059088,26059177-26060079,
26060163-26060225,26060537-26061025,26061211-26061291,
26061801-26061956,26062371-26062416
Length = 1160
Score = 43.6 bits (98), Expect = 5e-05
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 14 YAAALLKIGEDRMAKDGNGMITLDREFC-NVVHNPDDLNNF---VYSELLTNMRNRDWLC 69
+A LL++G + G I L + C N DL V+ L N+ + +++
Sbjct: 1067 FADYLLRVGNGTEEVNKEGNIGLPSDICLECKGNETDLERLIDTVFPNLNDNLTDPNYII 1126
Query: 70 ERAILAPTNEMVGQINEQIMSRVEGDIVEFLSVD 103
RAIL+ NE V +IN +++ R GD++ + S D
Sbjct: 1127 CRAILSTRNEFVDRINMKMIERFRGDVMTYHSFD 1160
>09_01_0179 - 2627682-2628086
Length = 134
Score = 40.3 bits (90), Expect = 5e-04
Identities = 20/70 (28%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 61 NMRNRDWLCERAILAPTNEMVGQINEQIMSRVEGDIVEFLSVDTVMDTEQVTSYPVEFLN 120
N + +++ R IL+ N+ V ++N ++ R + S D+V D Q +YP++FLN
Sbjct: 62 NTTSTEYMSTRTILSTKNDFVDKLNTNMIDRFPIKEKIYHSFDSVDDDSQ-NNYPLDFLN 120
Query: 121 SLELSGVPSH 130
++ + +P H
Sbjct: 121 TITPNSLPPH 130
>10_08_0263 -
16311650-16311675,16312101-16312149,16312987-16313167,
16313900-16314722,16314749-16314818
Length = 382
Score = 39.9 bits (89), Expect = 7e-04
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 55 YSELLTNMRNRDWLCERAILAPTNEMVGQINEQIMSRVEGD 95
Y L N +L ERAIL PTN+ V ++NE IM +++GD
Sbjct: 317 YPGLQYNCCKPKYLEERAILCPTNDDVNELNEYIMDQIQGD 357
>01_05_0444 +
22298490-22298598,22299847-22300108,22302420-22302516,
22302633-22302647,22302775-22302831,22303481-22303557,
22303688-22303967
Length = 298
Score = 37.5 bits (83), Expect = 0.003
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 49 DLNNFVYSEL--LTNMRNRDWLCERAILAPTNEMVGQINEQIMSRVEGDIVEFLSVDTVM 106
+L N V+ L N ++ AIL+ N+ V ++N ++ R + S D+V
Sbjct: 214 ELINHVFPSLHDKNNANFASYMSTHAILSTKNDYVDKLNANMIDRFSRHAKVYHSFDSV- 272
Query: 107 DTEQVTSYPVEFLNSLELSGVPSH 130
D + SY ++FLNS+ L V H
Sbjct: 273 DDDPHNSYHLDFLNSITLQMVSHH 296
>08_01_0087 + 630355-630403,630502-630699,631858-631943,632238-632946,
633029-633194,633459-633934,634023-634873,635078-635987,
636597-636784
Length = 1210
Score = 37.1 bits (82), Expect = 0.005
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 54 VYSELLTNMRNRDWLCERAILAPTNEMVGQINEQIMSRVEGDIVEFLSVD 103
V+ L N+ + +++ RAIL+ NE V +IN +++ R GD++ + S D
Sbjct: 1161 VFPNLNDNLTDPNYITCRAILSTRNEFVDRINMKMIERFRGDVMTYHSFD 1210
>05_03_0254 +
11089236-11089290,11089366-11089415,11089530-11089562,
11090601-11091674,11092245-11092728,11092857-11092882,
11092883-11092993,11093082-11093171,11093251-11093322,
11094043-11094153,11095086-11095143,11095605-11095804,
11096666-11096818,11097134-11097334
Length = 905
Score = 30.3 bits (65), Expect = 0.53
Identities = 29/122 (23%), Positives = 49/122 (40%), Gaps = 8/122 (6%)
Query: 6 HNDVQSGQYAAALLKIGEDRMAKDGNGMITLDREFCNVVHNPDDLNNFVYSELLTNMRNR 65
+ND+Q AL + ++ G + L + P+D L + +
Sbjct: 137 NNDMQDSPVTVALFPVFQEGQLYVGLSFVDLTNRKLGLSEFPEDSRFTNVESALVALGCK 196
Query: 66 DWL----CERAI-LAPTNEMVGQINEQIMSRVEGDIVEFLSVDTVMDTEQVTSYPVEFLN 120
+ L CE++I L P + + N + R + VEF S D V D ++ PVE +
Sbjct: 197 ECLLPADCEKSIDLKPLQDAITNCNVLLTERKK---VEFKSRDLVQDLGRIIRGPVEPVR 253
Query: 121 SL 122
L
Sbjct: 254 DL 255
>06_03_0619 + 22801576-22802016,22802111-22802596
Length = 308
Score = 28.7 bits (61), Expect = 1.6
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 21 IGEDRMAKDGNGMITLDREFCNVVHNPDDLNNF--VYSEL-LTNMRNRDWLCERAILAPT 77
+G M G G++ LDR F +V +D+ +Y L TN + RA+ A
Sbjct: 22 VGGSDMEAGGEGVVNLDRFFEDVEGVKEDMKGLEALYKRLQSTNEETKTAHDARAVKALR 81
Query: 78 NEMVGQINEQIMSRVE 93
+ M G + EQ++ R +
Sbjct: 82 SRMDGDV-EQVLRRAK 96
>03_01_0118 -
929956-929988,930059-930145,930230-930331,930515-930610,
931053-931148,931502-931564,931565-931630,931716-931790,
931906-932077,932116-932285
Length = 319
Score = 27.1 bits (57), Expect = 4.9
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 70 ERAILAPT-NEMVGQINEQIMSRVEGDIVEFLSVDTVMDTEQVTSYP 115
E A+ P N++ + SR G +V+F TV D + SYP
Sbjct: 119 EEALEIPVLNDLTMVLGSIAQSRATGVVVDFSEPSTVYDNVKQVSYP 165
>09_03_0137 +
12667763-12667930,12668715-12668779,12668879-12668954,
12669142-12669339,12669716-12669795,12670670-12670913,
12671061-12671162,12671243-12671305,12671550-12671627,
12671905-12671967,12672163-12672209,12672328-12672496
Length = 450
Score = 26.2 bits (55), Expect = 8.6
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 91 RVEGDIVEFLSVDTVMDTEQVTSYPVEFLNSLEL 124
RV+ D+ F++ D ++ ++ TSY E N E+
Sbjct: 308 RVDMDVKYFIATDLIIPKQESTSYSREATNEEEI 341
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.384
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,561,615
Number of Sequences: 37544
Number of extensions: 131663
Number of successful extensions: 340
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 317
Number of HSP's gapped (non-prelim): 20
length of query: 131
length of database: 14,793,348
effective HSP length: 74
effective length of query: 57
effective length of database: 12,015,092
effective search space: 684860244
effective search space used: 684860244
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 55 (26.2 bits)
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