GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001156-TA|BGIBMGA001156-PA|IPR010097|Malate
dehydrogenase, NAD-dependent, eukaryotes and gamma proteobacteria,
IPR001236|Lactate/malate dehydrogenase
         (344 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein p...    24   5.4  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    24   7.1  
AJ250916-1|CAB91840.1|  435|Anopheles gambiae serine protease pr...    23   9.3  

>AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein
           protein.
          Length = 400

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 3/34 (8%)

Query: 165 PSKMFGITHIDTSRSRSFVAKALKINAQEIQVPV 198
           PS M  ITH+D       +A+ALK   Q++++ V
Sbjct: 246 PSVMIEITHLDEITLAEEIAEALK---QQLEIDV 276


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 11/48 (22%), Positives = 24/48 (50%)

Query: 57  YDDDDRIKGTELELSNLPGGPSVSAFIGDTNLEQAIHSSNLVVMVSRM 104
           Y D   ++   +  S+L G PS   F     L+Q + ++++ + + R+
Sbjct: 205 YSDISPLRDGNIAFSSLEGRPSAINFDHHLELQQWVTATDIRITLDRL 252


>AJ250916-1|CAB91840.1|  435|Anopheles gambiae serine protease
           protein.
          Length = 435

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 6/29 (20%)

Query: 267 DAILGYRVVVNCYTANSNFGTKFFAGPTS 295
           DA  GY+ VV      + +GT+FF GP S
Sbjct: 318 DAWTGYQAVV------TGWGTQFFGGPHS 340


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.321    0.135    0.397 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 332,239
Number of Sequences: 2123
Number of extensions: 12945
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 15
Number of HSP's gapped (non-prelim): 3
length of query: 344
length of database: 516,269
effective HSP length: 65
effective length of query: 279
effective length of database: 378,274
effective search space: 105538446
effective search space used: 105538446
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 48 (23.4 bits)