Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001156-TA|BGIBMGA001156-PA|IPR010097|Malate
dehydrogenase, NAD-dependent, eukaryotes and gamma proteobacteria,
IPR001236|Lactate/malate dehydrogenase
(344 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09660.1 68418.m01117 malate dehydrogenase, glyoxysomal ident... 202 2e-52
At2g22780.1 68415.m02702 malate dehydrogenase, glyoxysomal, puta... 196 2e-50
At1g53240.1 68414.m06033 malate dehydrogenase [NAD], mitochondri... 194 7e-50
At3g47520.1 68416.m05168 malate dehydrogenase [NAD], chloroplast... 187 1e-47
At3g15020.1 68416.m01900 malate dehydrogenase [NAD], mitochondri... 186 1e-47
At4g17260.1 68417.m02595 L-lactate dehydrogenase, putative stron... 67 1e-11
At5g56720.1 68418.m07079 malate dehydrogenase, cytosolic, putati... 52 6e-07
At5g43330.1 68418.m05296 malate dehydrogenase, cytosolic, putati... 49 5e-06
At1g04410.1 68414.m00432 malate dehydrogenase, cytosolic, putati... 45 6e-05
At5g58330.2 68418.m07304 malate dehydrogenase [NADP], chloroplas... 36 0.039
At5g58330.1 68418.m07303 malate dehydrogenase [NADP], chloroplas... 36 0.039
At5g58330.3 68418.m07302 malate dehydrogenase [NADP], chloroplas... 35 0.091
At5g64170.1 68418.m08057 dentin sialophosphoprotein-related cont... 31 0.85
At5g20490.1 68418.m02435 myosin, putative similar to myosin (GI:... 29 6.0
At5g67040.1 68418.m08452 hypothetical protein contains Pfam prof... 28 7.9
At3g53800.1 68416.m05944 armadillo/beta-catenin repeat family pr... 28 7.9
At2g41520.2 68415.m05131 DNAJ heat shock N-terminal domain-conta... 28 7.9
At2g41520.1 68415.m05130 DNAJ heat shock N-terminal domain-conta... 28 7.9
>At5g09660.1 68418.m01117 malate dehydrogenase, glyoxysomal
identical to SP|Q9ZP05; identical to cDNA microbody
NAD-dependent malate dehydrogenase GI:3929650
Length = 354
Score = 202 bits (494), Expect = 2e-52
Identities = 109/311 (35%), Positives = 180/311 (57%), Gaps = 3/311 (0%)
Query: 27 QVSVIGAASDIGSYVSLFLKRNSKVSKLHLYDDDDRIKGTELELSNLPGGPSVSAFIGDT 86
+V+++GAA IG +SL +K N VS LHLYD + G ++S++ G V F+G
Sbjct: 44 KVAILGAAGGIGQSLSLLMKMNPLVSLLHLYDVVNA-PGVTADVSHMDTGAVVRGFLGAK 102
Query: 87 NLEQAIHSSNLVVMVSRMPRKPGNTREQMLGANAPLIQRLCKAIAAQNQEAFVAISTNPI 146
LE A+ +LV++ + +PRKPG TR+ + NA +++ LC+ +A A V + +NP+
Sbjct: 103 QLEDALTGMDLVIIPAGIPRKPGMTRDDLFKINAGIVKTLCEGVAKCCPNAIVNLISNPV 162
Query: 147 NYLIPFASTVMYKYGCYNPSKMFGITHIDTSRSRSFVAKALKINAQEIQVPVIGGHSDKT 206
N +P A+ V K G Y+P K+ G+T +D +R+ +FVA+ L ++ +E+ VPV+GGH+ T
Sbjct: 163 NSTVPIAAEVFKKAGTYDPKKLLGVTTLDVARANTFVAEVLGLDPREVDVPVVGGHAGVT 222
Query: 207 IIPLFSNLTPRNYRIEPCQADMLTRLVRKAGTEVVMHKHGAESSTLAMAWSINEFIDIIL 266
I+PL S + P + P + + LT ++ GTEVV K GA S+TL+MA++ +F D L
Sbjct: 223 ILPLLSQVKPPS-SFTPQEIEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACL 281
Query: 267 DAILGYRVVVNC-YTANSNFGTKFFAGPTSVGPHGIIQACCHFPMSEFESYLLNRCIPIL 325
+ G VV C + A+ FFA +G G + P++E+E L + L
Sbjct: 282 RGLRGDANVVECSFVASQVTELAFFATKVRLGRTGAEEVYQLGPLNEYERIGLEKAKDEL 341
Query: 326 SREVLEGEKYV 336
+ + +G +++
Sbjct: 342 AGSIQKGVEFI 352
>At2g22780.1 68415.m02702 malate dehydrogenase, glyoxysomal,
putative strong similarity to glyoxysomal malate
dehydrogenase (EC 1.1.1.37) SP|P19446 {Citrullus
lanatus}, SP|P46488 {Cucumis sativus}, [Medicago sativa]
GI:2827078, SP|Q42972 {Oryza sativa}, SP|Q9ZP05
{Arabidopsis thaliana}, SP|P37228 {Glycine max};
contains InterPro entry IPR001236: Lactate/malate
dehydrogenase
Length = 354
Score = 196 bits (478), Expect = 2e-50
Identities = 108/312 (34%), Positives = 179/312 (57%), Gaps = 3/312 (0%)
Query: 27 QVSVIGAASDIGSYVSLFLKRNSKVSKLHLYDDDDRIKGTELELSNLPGGPSVSAFIGDT 86
+V+++GAA IG +++ +K N VS LHLYD + G ++S++ V F+G
Sbjct: 44 KVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVANA-PGVTADISHMDTSAVVRGFLGQP 102
Query: 87 NLEQAIHSSNLVVMVSRMPRKPGNTREQMLGANAPLIQRLCKAIAAQNQEAFVAISTNPI 146
LE+A+ +LV++ + +PRKPG TR+ + NA +++ L +AIA +A V I +NP+
Sbjct: 103 QLEEALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLSEAIAKCCPKAIVNIISNPV 162
Query: 147 NYLIPFASTVMYKYGCYNPSKMFGITHIDTSRSRSFVAKALKINAQEIQVPVIGGHSDKT 206
N +P A+ V K G ++P K+ G+T +D R+ +FVA+ + ++ +E++VPV+GGH+ T
Sbjct: 163 NSTVPIAAEVFKKAGTFDPKKLMGVTMLDVVRANTFVAEVMSLDPREVEVPVVGGHAGVT 222
Query: 207 IIPLFSNLTPRNYRIEPCQADMLTRLVRKAGTEVVMHKHGAESSTLAMAWSINEFIDIIL 266
I+PL S + P + + LT ++ GTEVV K GA S+TL+MA++ EF D L
Sbjct: 223 ILPLLSQVKP-PCSFTQKEIEYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVEFADACL 281
Query: 267 DAILGYRVVVNC-YTANSNFGTKFFAGPTSVGPHGIIQACCHFPMSEFESYLLNRCIPIL 325
+ G +V C Y A+ FFA +G GI + P++E+E L + L
Sbjct: 282 RGLRGDANIVECAYVASHVTELPFFASKVRLGRCGIDEVYGLGPLNEYERMGLEKAKKEL 341
Query: 326 SREVLEGEKYVE 337
S + +G + +
Sbjct: 342 SVSIHKGVTFAK 353
>At1g53240.1 68414.m06033 malate dehydrogenase [NAD], mitochondrial
identical to mitochondrial NAD-dependent malate
dehydrogenase GI:3929649 SP|Q9ZP06 from [Arabidopsis
thaliana]; contains InterPro entry IPR001236:
Lactate/malate dehydrogenase
Length = 341
Score = 194 bits (473), Expect = 7e-50
Identities = 107/310 (34%), Positives = 172/310 (55%), Gaps = 3/310 (0%)
Query: 27 QVSVIGAASDIGSYVSLFLKRNSKVSKLHLYDDDDRIKGTELELSNLPGGPSVSAFIGDT 86
+V+++GAA IG ++L +K N VS L LYD + G ++ ++ V ++GD
Sbjct: 31 KVAILGAAGGIGQPLALLMKLNPLVSSLSLYDIANT-PGVAADVGHINTRSEVVGYMGDD 89
Query: 87 NLEQAIHSSNLVVMVSRMPRKPGNTREQMLGANAPLIQRLCKAIAAQNQEAFVAISTNPI 146
NL +A+ ++LV++ + +PRKPG TR+ + NA +++ LC AIA A + + +NP+
Sbjct: 90 NLAKALEGADLVIIPAGVPRKPGMTRDDLFNINAGIVKNLCTAIAKYCPHALINMISNPV 149
Query: 147 NYLIPFASTVMYKYGCYNPSKMFGITHIDTSRSRSFVAKALKINAQEIQVPVIGGHSDKT 206
N +P A+ + K G Y+ K+FG+T +D R+R+F A + E+ VPVIGGH+ T
Sbjct: 150 NSTVPIAAEIFKKAGMYDEKKLFGVTTLDVVRARTFYAGKANVPVAEVNVPVIGGHAGVT 209
Query: 207 IIPLFSNLTPRNYRIEPCQADMLTRLVRKAGTEVVMHKHGAESSTLAMAWSINEFIDIIL 266
I+PLFS TP+ + LT+ + GTEVV K G S+TL+MA++ F D L
Sbjct: 210 ILPLFSQATPQ-ANLSSDILTALTKRTQDGGTEVVEAKAGKGSATLSMAYAGALFADACL 268
Query: 267 DAILGYRVVVNC-YTANSNFGTKFFAGPTSVGPHGIIQACCHFPMSEFESYLLNRCIPIL 325
+ G V+ C Y ++ FFA +G +G+ + P+S+FE L P L
Sbjct: 269 KGLNGVPDVIECSYVQSTITELPFFASKVRLGKNGVEEVLDLGPLSDFEKEGLEALKPEL 328
Query: 326 SREVLEGEKY 335
+ +G K+
Sbjct: 329 KSSIEKGVKF 338
>At3g47520.1 68416.m05168 malate dehydrogenase [NAD], chloroplast
(MDH) identical to chloroplast NAD-malate dehydrogenase
[Arabidopsis thaliana] GI:3256066; contains InterPro
entry IPR001236: Lactate/malate dehydrogenase; contains
Pfam profiles PF00056: lactate/malate dehydrogenase, NAD
binding domain and PF02866: lactate/malate
dehydrogenase, alpha/beta C-terminal domain
Length = 403
Score = 187 bits (455), Expect = 1e-47
Identities = 105/277 (37%), Positives = 160/277 (57%), Gaps = 5/277 (1%)
Query: 27 QVSVIGAASDIGSYVSLFLKRNSKVSKLHLYDDDDRIKGTELELSNLPGGPSVSAFIGDT 86
+V+V+GAA IG +SL +K + VS LHLYD + +KG +LS+ V F G +
Sbjct: 84 KVAVLGAAGGIGQPLSLLIKMSPLVSTLHLYDIAN-VKGVAADLSHCNTPSQVRDFTGPS 142
Query: 87 NLEQAIHSSNLVVMVSRMPRKPGNTREQMLGANAPLIQRLCKAIAAQNQEAFVAISTNPI 146
L + N+VV+ + +PRKPG TR+ + NA +++ L +A+A AF+ I +NP+
Sbjct: 143 ELADCLKDVNVVVIPAGVPRKPGMTRDDLFNINANIVKTLVEAVAENCPNAFIHIISNPV 202
Query: 147 NYLIPFASTVMYKYGCYNPSKMFGITHIDTSRSRSFVAKALKINAQEIQVPVIGGHSDKT 206
N +P A+ V+ K G Y+P K+FG+T +D R+ +FV++ + ++ VPVIGGH+ T
Sbjct: 203 NSTVPIAAEVLKKKGVYDPKKLFGVTTLDVVRANTFVSQKKNLKLIDVDVPVIGGHAGIT 262
Query: 207 IIPLFSNLTPR-NYRIEPCQADMLTRLVRKAGTEVVMHKHGAESSTLAMAWSINEFIDII 265
I+PL S P N+ E Q LT ++ AGTEVV K GA S+TL+MA++ F++
Sbjct: 263 ILPLLSKTKPSVNFTDEEIQE--LTVRIQNAGTEVVDAKAGAGSATLSMAYAAARFVESS 320
Query: 266 LDAILGYRVVVNCYTANSNF-GTKFFAGPTSVGPHGI 301
L A+ G V C S FFA +G +G+
Sbjct: 321 LRALDGDGDVYECSFVESTLTDLPFFASRVKIGKNGL 357
>At3g15020.1 68416.m01900 malate dehydrogenase [NAD], mitochondrial,
putative similar to mitochondrial NAD-dependent malate
dehydrogenase GB:CAA10320 SP|Q9ZP06 [Arabidopsis
thaliana]; contains InterPro entry IPR001236:
Lactate/malate dehydrogenase
Length = 341
Score = 186 bits (454), Expect = 1e-47
Identities = 109/311 (35%), Positives = 173/311 (55%), Gaps = 5/311 (1%)
Query: 27 QVSVIGAASDIGSYVSLFLKRNSKVSKLHLYDDDDRIKGTELELSNLPGGPSVSAFIGDT 86
+V ++GAA IG +SL +K N VS L LYD + G ++ ++ VS ++GD
Sbjct: 31 KVVILGAAGGIGQPLSLLMKLNPLVSSLSLYDIANT-PGVAADVGHINTRSQVSGYMGDD 89
Query: 87 NLEQAIHSSNLVVMVSRMPRKPGNTREQMLGANAPLIQRLCKAIAAQNQEAFVAISTNPI 146
+L +A+ ++LV++ + +PRKPG TR+ + NA +++ L AIA +A V + +NP+
Sbjct: 90 DLGKALEGADLVIIPAGVPRKPGMTRDDLFNINAGIVKNLSIAIAKYCPQALVNMISNPV 149
Query: 147 NYLIPFASTVMYKYGCYNPSKMFGITHIDTSRSRSFVAKALKINAQEIQVPVIGGHSDKT 206
N +P A+ + K G Y+ K+FG+T +D R+R+F A +N E+ VPV+GGH+ T
Sbjct: 150 NSTVPIAAEIFKKAGTYDEKKLFGVTTLDVVRARTFYAGKSDVNVAEVNVPVVGGHAGIT 209
Query: 207 IIPLFSNLTPR-NYRIEPCQADMLTRLVRKAGTEVVMHKHGAESSTLAMAWSINEFIDII 265
I+PLFS +P+ N + +A LT+ + GTEVV K G S+TL+MA++ F D
Sbjct: 210 ILPLFSQASPQANLSDDLIRA--LTKRTQDGGTEVVEAKAGKGSATLSMAYAGALFADAC 267
Query: 266 LDAILGYRVVVNCYTANSNF-GTKFFAGPTSVGPHGIIQACCHFPMSEFESYLLNRCIPI 324
L + G VV C S FFA +G +G+ + P+S+FE L
Sbjct: 268 LKGLNGVPNVVECSFVQSTITELPFFASKVRLGKNGVEEVLDLGPLSDFEKEGLEALKAE 327
Query: 325 LSREVLEGEKY 335
L + +G K+
Sbjct: 328 LKSSIEKGIKF 338
>At4g17260.1 68417.m02595 L-lactate dehydrogenase, putative strong
similarity to L-lactate dehydrogenase from Lycopersicon
esculentum (GI:1620970, GI:1620972), Hordeum vulgare
(SP|P22988, SP|P22989); contains InterPro entry
IPR001236: Lactate/malate dehydrogenase
Length = 353
Score = 67.3 bits (157), Expect = 1e-11
Identities = 45/194 (23%), Positives = 99/194 (51%), Gaps = 9/194 (4%)
Query: 24 RNVQVSVIGAASDIGSYVSLFLKRNSKVSKLHLYD-DDDRIKGTELELSNLPGGPSVSAF 82
R +VSV+G + +G ++ + ++ L D D+++G L+L + +
Sbjct: 39 RRTKVSVVGVGN-VGMAIAQTILTQDLADEIALVDAKPDKLRGEMLDLQHAAAFLPRTKI 97
Query: 83 IGDTNLEQAIHSSNLVVMVSRMPRKPGNTREQMLGANAPLIQRLCKAIAAQNQEAFVAIS 142
+ E S+L ++ + + PG +R +L N L + + +A + ++ + I
Sbjct: 98 TASVDYEVTA-GSDLCIVTAGARQNPGESRLNLLQRNVALFRHIIPPLAKASPDSILIIV 156
Query: 143 TNPINYLIPFASTVMYKYGCYNPSKMFGI-THIDTSRSRSFVAKALKINAQEIQVPVIGG 201
+NP++ L + V +K + +++ G T++D+SR R +A L +NAQ++Q ++G
Sbjct: 157 SNPVDVL----TYVAWKLSGFPVNRVLGSGTNLDSSRFRFLIADHLDVNAQDVQAFIVGE 212
Query: 202 HSDKTIIPLFSNLT 215
H D + + L+S+++
Sbjct: 213 HGDSS-VALWSSIS 225
>At5g56720.1 68418.m07079 malate dehydrogenase, cytosolic, putative
similar to cytosolic malate dehydrogenase from
Mesembryanthemum crystallinum [SP|O24047], Medicago
sativa [SP|O48905], Prunus persica [GI:15982948];
contains InterPro entry IPR001236: Lactate/malate
dehydrogenase
Length = 339
Score = 52.0 bits (119), Expect = 6e-07
Identities = 43/203 (21%), Positives = 93/203 (45%), Gaps = 15/203 (7%)
Query: 17 NTLILQKRNVQVSVIGAASDIGSYVSLFLKRNSKVSK-----LHLYDDD---DRIKGTEL 68
N L ++K ++V + GAA +IG ++ + R + LHL D + ++ ++
Sbjct: 3 NLLNIEKDPIRVLITGAAGNIGYAIAPMIARGIMLGPDQPMILHLLDIEPASSSLEAVKM 62
Query: 69 ELSNLPGGPSVSAFIGDTNLEQAIHSSNLVVMVSRMPRKPGNTREQMLGANAPLIQRLCK 128
EL + P + I TN+ +A N+V+M+ PR G R+ ++ N + +
Sbjct: 63 ELQD-SAFPLLKGVIATTNVVEACKDVNIVIMIGGFPRIAGMERKDVMSKNVVIYKAQAS 121
Query: 129 AIAA-QNQEAFVAISTNPINYLIPFASTVMYKYGCYNPSK-MFGITHIDTSRSRSFVAKA 186
A+ + + V + NP N + ++ ++ P + + +T +D +R+ + +A
Sbjct: 122 ALERYASDDCKVLVVANPAN----TNALILKEFAPSIPEENITCLTRLDHNRALAQLADK 177
Query: 187 LKINAQEIQVPVIGGHSDKTIIP 209
L + ++ ++ G+ T P
Sbjct: 178 LSVPVSSVKNVIVWGNHSSTQYP 200
>At5g43330.1 68418.m05296 malate dehydrogenase, cytosolic, putative
strong similarity to cytosolic malate dehydrogenase (EC
1.1.1.37) SP|O24047 {Mesembryanthemum crystallinum},
SP|O48905 {Medicago sativa}, [Prunus persica]
GI:15982948; contains InterPro entry IPR001236:
Lactate/malate dehydrogenase
Length = 332
Score = 48.8 bits (111), Expect = 5e-06
Identities = 49/207 (23%), Positives = 93/207 (44%), Gaps = 19/207 (9%)
Query: 21 LQKRNVQVSVIGAASDIGSYVSLFLKRNSKVSK-----LHLYDDD---DRIKGTELELSN 72
+ K V+V V GAA IG + + R + LH+ D + + G ++EL +
Sbjct: 1 MAKEPVRVLVTGAAGQIGYALVPMIARGIMLGADQPVILHMLDIPFAAEALNGVKMELVD 60
Query: 73 LPGGPSVSAFIGDTNLEQAIHSSNLVVMVSRMPRKPGNTREQMLGANAPLIQRLCKAI-- 130
P + + T+ +A N+ VMV PRK G R+ ++ N + + A+
Sbjct: 61 A-AFPLLKGVVATTDAVEACTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEK 119
Query: 131 -AAQNQEAFVAISTNPINYLIPFASTVMYKYGCYNPSK-MFGITHIDTSRSRSFVAKALK 188
AA N + V + NP N + ++ ++ P K + +T +D +R+ V++ L
Sbjct: 120 HAAPNCK--VLVVANPAN----TNALILKEFAPSIPEKNITCLTRLDHNRALGQVSERLS 173
Query: 189 INAQEIQVPVIGGHSDKTIIPLFSNLT 215
+ +++ +I G+ T P ++ T
Sbjct: 174 VPVSDVKNVIIWGNHSSTQYPDVNHAT 200
>At1g04410.1 68414.m00432 malate dehydrogenase, cytosolic, putative
strong similarity to malate dehydrogenase from
Mesembryanthemum crystallinum [SP|O24047], Medicago
sativa [SP|O48905], Prunus persica [GI:15982948];
contains InterPro entry IPR001236: Lactate/malate
dehydrogenase
Length = 332
Score = 45.2 bits (102), Expect = 6e-05
Identities = 45/201 (22%), Positives = 88/201 (43%), Gaps = 19/201 (9%)
Query: 21 LQKRNVQVSVIGAASDIGSYVSLFLKRNSKVSK-----LHLYDDD---DRIKGTELELSN 72
+ K V+V V GAA IG + + R + LH+ D + + G ++EL +
Sbjct: 1 MAKEPVRVLVTGAAGQIGYALVPMIARGIMLGADQPVILHMLDIPPAAEALNGVKMELID 60
Query: 73 LPGGPSVSAFIGDTNLEQAIHSSNLVVMVSRMPRKPGNTREQMLGANAPLIQRLCKAI-- 130
P + + T+ + N+ VMV PRK G R+ ++ N + + A+
Sbjct: 61 A-AFPLLKGVVATTDAVEGCTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQAAALEK 119
Query: 131 -AAQNQEAFVAISTNPINYLIPFASTVMYKYGCYNPSKMFG-ITHIDTSRSRSFVAKALK 188
AA N + V + NP N + ++ ++ P K +T +D +R+ +++ L
Sbjct: 120 HAAPNCK--VLVVANPAN----TNALILKEFAPSIPEKNISCLTRLDHNRALGQISERLS 173
Query: 189 INAQEIQVPVIGGHSDKTIIP 209
+ +++ +I G+ + P
Sbjct: 174 VPVSDVKNVIIWGNHSSSQYP 194
>At5g58330.2 68418.m07304 malate dehydrogenase [NADP], chloroplast,
putative strong similiarity to chloroplast
NADP-dependent malate dehydrogenase (EC 1.1.1.82)
SP|O48902 {Medicago sativa}, SP|P21528 {Pisum sativum},
SP|Q05145 {Mesembryanthemum crystallinum}, SP|P46489
{Flaveria bidentis}, [Flaveria trinervia] GI:726334,
SP|P17606I {Sorghum bicolor}; contains InterPro entry
IPR001236: Lactate/malate dehydrogenase
Length = 442
Score = 35.9 bits (79), Expect = 0.039
Identities = 47/219 (21%), Positives = 88/219 (40%), Gaps = 16/219 (7%)
Query: 5 IFCCLFATQLKKNTLILQKRNVQVSVIGAASDIGSYVSLFLKRNSKVS------KLHLYD 58
+FC + + ++ T +K + ++V GAA I +++ LF + +V L L
Sbjct: 79 VFCLTYDLKAEEETRSWKKL-INIAVSGAAGMISNHL-LFKLASGEVFGPDQPIALKLLG 136
Query: 59 DDDRIKGTELELSNLPGG--PSVSAFIGDTNLEQAIHSSNLVVMVSRMPRKPGNTREQML 116
+ I+ E L P + T+ + +++ PR PG R +L
Sbjct: 137 SERSIQALEGVAMELEDSLFPLLREVDIGTDPNEVFQDVEWAILIGAKPRGPGMERADLL 196
Query: 117 GANAPLIQRLCKAI-AAQNQEAFVAISTNPINYLIPFASTVMYKYGCYNPSKMF-GITHI 174
N + KA+ A + V + NP N + + K P+K F +T +
Sbjct: 197 DINGQIFAEQGKALNKAASPNVKVLVVGNPCN----TNALICLKNAPNIPAKNFHALTRL 252
Query: 175 DTSRSRSFVAKALKINAQEIQVPVIGGHSDKTIIPLFSN 213
D +R++ +A + ++ I G+ T +P F N
Sbjct: 253 DENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLN 291
>At5g58330.1 68418.m07303 malate dehydrogenase [NADP], chloroplast,
putative strong similiarity to chloroplast
NADP-dependent malate dehydrogenase (EC 1.1.1.82)
SP|O48902 {Medicago sativa}, SP|P21528 {Pisum sativum},
SP|Q05145 {Mesembryanthemum crystallinum}, SP|P46489
{Flaveria bidentis}, [Flaveria trinervia] GI:726334,
SP|P17606I {Sorghum bicolor}; contains InterPro entry
IPR001236: Lactate/malate dehydrogenase
Length = 443
Score = 35.9 bits (79), Expect = 0.039
Identities = 47/219 (21%), Positives = 88/219 (40%), Gaps = 16/219 (7%)
Query: 5 IFCCLFATQLKKNTLILQKRNVQVSVIGAASDIGSYVSLFLKRNSKVS------KLHLYD 58
+FC + + ++ T +K + ++V GAA I +++ LF + +V L L
Sbjct: 80 VFCLTYDLKAEEETRSWKKL-INIAVSGAAGMISNHL-LFKLASGEVFGPDQPIALKLLG 137
Query: 59 DDDRIKGTELELSNLPGG--PSVSAFIGDTNLEQAIHSSNLVVMVSRMPRKPGNTREQML 116
+ I+ E L P + T+ + +++ PR PG R +L
Sbjct: 138 SERSIQALEGVAMELEDSLFPLLREVDIGTDPNEVFQDVEWAILIGAKPRGPGMERADLL 197
Query: 117 GANAPLIQRLCKAI-AAQNQEAFVAISTNPINYLIPFASTVMYKYGCYNPSKMF-GITHI 174
N + KA+ A + V + NP N + + K P+K F +T +
Sbjct: 198 DINGQIFAEQGKALNKAASPNVKVLVVGNPCN----TNALICLKNAPNIPAKNFHALTRL 253
Query: 175 DTSRSRSFVAKALKINAQEIQVPVIGGHSDKTIIPLFSN 213
D +R++ +A + ++ I G+ T +P F N
Sbjct: 254 DENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDFLN 292
>At5g58330.3 68418.m07302 malate dehydrogenase [NADP], chloroplast,
putative strong similiarity to chloroplast
NADP-dependent malate dehydrogenase (EC 1.1.1.82)
SP|O48902 {Medicago sativa}, SP|P21528 {Pisum sativum},
SP|Q05145 {Mesembryanthemum crystallinum}, SP|P46489
{Flaveria bidentis}, [Flaveria trinervia] GI:726334,
SP|P17606I {Sorghum bicolor}; contains InterPro entry
IPR001236: Lactate/malate dehydrogenase
Length = 334
Score = 34.7 bits (76), Expect = 0.091
Identities = 29/130 (22%), Positives = 53/130 (40%), Gaps = 6/130 (4%)
Query: 86 TNLEQAIHSSNLVVMVSRMPRKPGNTREQMLGANAPLIQRLCKAI-AAQNQEAFVAISTN 144
T+ + +++ PR PG R +L N + KA+ A + V + N
Sbjct: 58 TDPNEVFQDVEWAILIGAKPRGPGMERADLLDINGQIFAEQGKALNKAASPNVKVLVVGN 117
Query: 145 PINYLIPFASTVMYKYGCYNPSKMF-GITHIDTSRSRSFVAKALKINAQEIQVPVIGGHS 203
P N + + K P+K F +T +D +R++ +A + ++ I G+
Sbjct: 118 PCN----TNALICLKNAPNIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNH 173
Query: 204 DKTIIPLFSN 213
T +P F N
Sbjct: 174 STTQVPDFLN 183
>At5g64170.1 68418.m08057 dentin sialophosphoprotein-related
contains weak similarity to Swiss-Prot:Q9NZW4 dentin
sialophosphoprotein precursor [Homo sapiens]
Length = 566
Score = 31.5 bits (68), Expect = 0.85
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 51 VSKLHLYDDDDRIKGTELELSNLPGGPSVSAFIGDTNLE 89
+ K+ L ++D R TELE SN+ G VS+ + D +LE
Sbjct: 393 IQKIGL-ENDHRKAATELETSNMQGSSCVSSVVDDISLE 430
>At5g20490.1 68418.m02435 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]; myosin-like protein
my5, common sunflower, PIR:T14279
Length = 1545
Score = 28.7 bits (61), Expect = 6.0
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 11/76 (14%)
Query: 185 KALKINAQEIQVPVIGGHSDKTIIPLFSNLTPRNYRIEPCQADMLTRLVRKAGTEVVMHK 244
+ +KIN +E+ G KT++ +N+ P++ P D +T+L +H+
Sbjct: 40 EVVKINGEEVHAHTTNG---KTVVANIANVFPKDTEAPPGGVDDMTKL-------SYLHE 89
Query: 245 HGAESSTLAMAWSINE 260
G + LAM + +NE
Sbjct: 90 PGV-LNNLAMRYELNE 104
>At5g67040.1 68418.m08452 hypothetical protein contains Pfam
profile PF03478: Protein of unknown function (DUF295)
Length = 165
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 51 VSKLHLYDDDDRIKGTELELSNLPGGPSVSAFIGDTNLEQAIHSSNLV 98
+ LHL +++++K +L LSNLP P G L+Q S +LV
Sbjct: 1 MGSLHLNSNNNKLKYQKLRLSNLPKIPDA----GREMLDQCFMSKHLV 44
>At3g53800.1 68416.m05944 armadillo/beta-catenin repeat family
protein contains Pfam profile: PF00514
armadillo/beta-catenin-like repeat
Length = 363
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 202 HSDKTIIPLFSNLTPRNYRIEPCQADMLTRLVRK--AGTEVVMHKHGAE 248
HS ++PL S L N +I AD+LT +V+ ++VM +G E
Sbjct: 96 HSIGGLVPLLSYLKNSNAKIRAKSADVLTTVVQNNPRSQQLVMEANGFE 144
>At2g41520.2 68415.m05131 DNAJ heat shock N-terminal
domain-containing protein contains Pfam profiles
PF00226: DnaJ domain, PF00515: TPR Domain
Length = 1077
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Query: 13 QLKKNTLILQKRNVQVSVIGAASDIG----SYVSLFLKRNSKVSKLHLY 57
+L +NTL +RN + IG +++ +Y SL + R +K+SK H Y
Sbjct: 742 ELCENTLQTAERNFVSAGIGGTTNVNGLGSTYHSLIVWRWNKISKSHFY 790
>At2g41520.1 68415.m05130 DNAJ heat shock N-terminal
domain-containing protein contains Pfam profiles
PF00226: DnaJ domain, PF00515: TPR Domain
Length = 1108
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Query: 13 QLKKNTLILQKRNVQVSVIGAASDIG----SYVSLFLKRNSKVSKLHLY 57
+L +NTL +RN + IG +++ +Y SL + R +K+SK H Y
Sbjct: 742 ELCENTLQTAERNFVSAGIGGTTNVNGLGSTYHSLIVWRWNKISKSHFY 790
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.321 0.135 0.397
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,634,108
Number of Sequences: 28952
Number of extensions: 304894
Number of successful extensions: 723
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 697
Number of HSP's gapped (non-prelim): 18
length of query: 344
length of database: 12,070,560
effective HSP length: 82
effective length of query: 262
effective length of database: 9,696,496
effective search space: 2540481952
effective search space used: 2540481952
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 60 (28.3 bits)
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