Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001155-TA|BGIBMGA001155-PA|undefined
(345 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g43900.1 68415.m05457 endonuclease/exonuclease/phosphatase fa... 35 0.091
At1g77920.1 68414.m09080 bZIP family transcription factor contai... 33 0.28
At1g53140.1 68414.m06017 dynamin family protein low similarity t... 33 0.28
At5g01660.1 68418.m00082 kelch repeat-containing protein similar... 33 0.37
At4g02720.1 68417.m00368 expressed protein temporary automated f... 31 1.1
At3g27700.2 68416.m03459 RNA recognition motif (RRM)-containing ... 31 1.5
At3g27700.1 68416.m03458 RNA recognition motif (RRM)-containing ... 31 1.5
At2g37080.1 68415.m04550 myosin heavy chain-related low similari... 31 1.5
At2g27470.1 68415.m03320 CCAAT-box binding transcription factor ... 31 1.5
At2g01680.1 68415.m00095 ankyrin repeat family protein contains ... 31 1.5
At1g33680.1 68414.m04166 KH domain-containing protein similar to... 31 1.5
At3g28770.1 68416.m03591 expressed protein 30 2.0
At3g21320.1 68416.m02693 hypothetical protein 30 2.0
At3g02930.1 68416.m00288 expressed protein ; expression support... 30 2.0
At2g22610.1 68415.m02680 kinesin motor protein-related 30 2.0
At4g15030.1 68417.m02309 expressed protein 30 2.6
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 30 2.6
At5g60210.1 68418.m07547 cytoplasmic linker protein-related cont... 29 3.4
At3g58220.1 68416.m06491 meprin and TRAF homology domain-contain... 29 3.4
At2g39110.1 68415.m04805 protein kinase, putative similar to pro... 29 3.4
At2g36050.1 68415.m04426 ovate protein-related contains TIGRFAM ... 29 3.4
At2g25930.1 68415.m03112 hydroxyproline-rich glycoprotein family... 29 3.4
At1g64330.1 68414.m07290 myosin heavy chain-related similar to m... 29 3.4
At5g28400.1 68418.m03448 expressed protein 29 4.5
At5g27220.1 68418.m03247 protein transport protein-related low s... 29 4.5
At5g10950.1 68418.m01271 cylicin-related low similarity to SP|Q2... 29 4.5
At3g59060.2 68416.m06584 basic helix-loop-helix (bHLH) family pr... 29 4.5
At3g59060.1 68416.m06583 basic helix-loop-helix (bHLH) family pr... 29 4.5
At3g11150.1 68416.m01351 expressed protein 29 4.5
At2g41940.1 68415.m05188 zinc finger (C2H2 type) family protein ... 29 4.5
At2g03500.1 68415.m00309 myb family transcription factor contain... 29 4.5
At1g02540.1 68414.m00205 hypothetical protein 29 4.5
At5g54650.2 68418.m06805 formin homology 2 domain-containing pro... 29 6.0
At5g54650.1 68418.m06804 formin homology 2 domain-containing pro... 29 6.0
At5g53930.1 68418.m06710 expressed protein 29 6.0
At5g44310.2 68418.m05424 late embryogenesis abundant domain-cont... 29 6.0
At5g44310.1 68418.m05423 late embryogenesis abundant domain-cont... 29 6.0
At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almos... 29 6.0
At5g40570.1 68418.m04923 surfeit locus protein 2 family protein ... 29 6.0
At5g01370.1 68418.m00050 expressed protein 29 6.0
At4g35240.1 68417.m05009 expressed protein contains Pfam domains... 29 6.0
At3g54520.1 68416.m06033 hypothetical protein 29 6.0
At3g48940.1 68416.m05346 remorin family protein contains Pfam do... 29 6.0
At3g22790.1 68416.m02873 kinase interacting family protein simil... 29 6.0
At3g01780.1 68416.m00118 expressed protein est hit, 29 6.0
At1g56660.1 68414.m06516 expressed protein 29 6.0
At5g28320.1 68418.m03438 expressed protein This is likely a pseu... 28 7.9
At4g37820.1 68417.m05351 expressed protein Kaposi's sarcoma-asso... 28 7.9
At4g31570.1 68417.m04483 expressed protein 28 7.9
At4g09950.1 68417.m01628 avirulence-responsive family protein / ... 28 7.9
At4g02570.1 68417.m00351 cullin family protein similar to cullin... 28 7.9
At1g55475.1 68414.m06345 expressed protein 28 7.9
At1g26330.1 68414.m03211 hypothetical protein 28 7.9
At1g06230.2 68414.m00659 DNA-binding bromodomain-containing prot... 28 7.9
At1g06230.1 68414.m00658 DNA-binding bromodomain-containing prot... 28 7.9
>At2g43900.1 68415.m05457 endonuclease/exonuclease/phosphatase family
protein belongs to Pfam:PF03372:
Endonuclease/Exonuclease/phosphatase family; contains 3
WD-40 repeats (PF00400);similar to Type II
inositol-1,4,5-trisphosphate 5-phosphatase EC 3.1.3.56
(5PTASE) (INPP5B) (SP:P32019) [Homo sapiens]
Length = 1305
Score = 34.7 bits (76), Expect = 0.091
Identities = 26/107 (24%), Positives = 50/107 (46%), Gaps = 3/107 (2%)
Query: 63 QQCLKSRNKQINMDNDNQYVAQQLRDHQLQYNGKNRKISLLKPSVLTEIHIKTENHNDAI 122
+ C ++N +I+ + N +Q L+ ++ N K+ K S ++ K++ +++
Sbjct: 1091 RHCFSAKNLRIDSNPSNSK-SQSLKKNEGDSNSKSSKKS--DGDSNSKSSKKSDGDSNSK 1147
Query: 123 KGSISDSENELKSSLEKDNSNNSESDEKEKYHRNFAQYHNSVQDSRS 169
SD ++ KSS + D +NS+S +K N S DS S
Sbjct: 1148 SSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSNS 1194
>At1g77920.1 68414.m09080 bZIP family transcription factor contains
Pfam profile: PF00170 bZIP transcription factor
Length = 368
Score = 33.1 bits (72), Expect = 0.28
Identities = 19/82 (23%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 106 SVLTEIHIKTENHNDAIKGSISDSENELKSSLEKDNSNNSESDE---KEKYHRNFAQYHN 162
S + ++ + ++HN+ IK + S N++++ E+ +SN+++ D+ +K R AQ
Sbjct: 46 SSIIQVDPRIDDHNNNIKINYDSSHNQIEA--EQPSSNDNQDDDGRIHDKMKRRLAQNRE 103
Query: 163 SVQDSRSNFVNALKKVKETLVK 184
+ + SR +++++E+ +K
Sbjct: 104 AARKSRLRKKAYVQQLEESRLK 125
>At1g53140.1 68414.m06017 dynamin family protein low similarity to
dynamin-like protein E [Arabidopsis thaliana]
GI:19423872; contains Pfam profile PF00350: Dynamin
family
Length = 817
Score = 33.1 bits (72), Expect = 0.28
Identities = 16/51 (31%), Positives = 30/51 (58%)
Query: 136 SLEKDNSNNSESDEKEKYHRNFAQYHNSVQDSRSNFVNALKKVKETLVKDH 186
+LE++ + NSE ++K + + +H +V++ S FV L K + LV+ H
Sbjct: 525 ALERNLNQNSEYEKKTENMDGYVGFHAAVRNCYSRFVKNLAKQCKQLVRHH 575
>At5g01660.1 68418.m00082 kelch repeat-containing protein similar to
SP|P57790 Kelch-like ECH-associated protein 1 (Cytosolic
inhibitor of Nrf2) {Rattus norvegicus}; contains Pfam
profile PF01344: Kelch motif
Length = 621
Score = 32.7 bits (71), Expect = 0.37
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 126 ISDSENELKSSLEKDNSNNSESDEK-EKYHRNFAQYHNSVQDSRS-NFVNALKKVKETLV 183
+ SENE SLE S+ ESD H F++ H VQ+ + + + L+K+K+ LV
Sbjct: 147 VKPSENEPVGSLEVSLSSGGESDSSAAASHPGFSENHPDVQNPKQIDKDHVLEKLKD-LV 205
Query: 184 KDHSEWHEPRSDTD 197
H E H S T+
Sbjct: 206 FSHDE-HGDNSLTE 218
>At4g02720.1 68417.m00368 expressed protein temporary automated
functional assignment
Length = 422
Score = 31.1 bits (67), Expect = 1.1
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 10/83 (12%)
Query: 123 KGSISDSENE-----LKSSLEKDNSNNSESDEKEKYHRNFAQY----HNSVQDSRSNFVN 173
+GS SDSE E KSS ++ S +S S K++ HR +Y +S +DS++ ++
Sbjct: 138 EGSESDSEEEDRRRRRKSSSKRKKSRSSRSFRKKRSHRRKTKYSDSDESSDEDSKAE-IS 196
Query: 174 ALKKVKETLVKDHSEWHEPRSDT 196
A +E K S+ + SD+
Sbjct: 197 ASSSGEEEDTKSKSKRRKKSSDS 219
>At3g27700.2 68416.m03459 RNA recognition motif (RRM)-containing
protein contains Pfam profile: PF00076 RNA recognition
motif
Length = 908
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Query: 67 KSRNKQINMDNDNQYVAQQLRDHQLQYNGKNRKISLLKPSVLTEIHIKTENHNDAIKGSI 126
+ N++ N +N+N RD+ N + KP+V + E N + G
Sbjct: 803 RQSNRESNNNNNNSNSLSVSRDNLSSKNKCASVSNDPKPAVEVKTSSTEEPENTNVSGD- 861
Query: 127 SDSENELKSSLEKDNSNNSESDE 149
+DS + + + E DN NN + E
Sbjct: 862 NDSTLDKQETKESDNDNNKSNHE 884
>At3g27700.1 68416.m03458 RNA recognition motif (RRM)-containing
protein contains Pfam profile: PF00076 RNA recognition
motif
Length = 908
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Query: 67 KSRNKQINMDNDNQYVAQQLRDHQLQYNGKNRKISLLKPSVLTEIHIKTENHNDAIKGSI 126
+ N++ N +N+N RD+ N + KP+V + E N + G
Sbjct: 803 RQSNRESNNNNNNSNSLSVSRDNLSSKNKCASVSNDPKPAVEVKTSSTEEPENTNVSGD- 861
Query: 127 SDSENELKSSLEKDNSNNSESDE 149
+DS + + + E DN NN + E
Sbjct: 862 NDSTLDKQETKESDNDNNKSNHE 884
>At2g37080.1 68415.m04550 myosin heavy chain-related low similarity
to myosin heavy chain [Rana catesbeiana] GI:4249701
Length = 583
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/71 (23%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 114 KTENHNDAIKGSISDSENELKSSLEKDNSNNSESDEKEKYHRNFAQYHNSVQDSRSNFVN 173
KT+ D++ + D E +L+ ++++ NS+ EKE+ + N NS+ +
Sbjct: 351 KTKAERDSLHERLMDKEAKLRILVDENEILNSKIKEKEEVYLNL---ENSLNQNEPEDTG 407
Query: 174 ALKKVKETLVK 184
LKK++ +++
Sbjct: 408 ELKKLESDVME 418
>At2g27470.1 68415.m03320 CCAAT-box binding transcription factor
subunit HAP3-related contains Pfam PF00808 :
Histone-like transcription factor (CBF/NF-Y) and
archaeal histone; similar to polymerase epsilon p17
subunit (DNA polymerase epsilon subunit 3) (YB-like
protein 1) (YBL1) (NF-YB-like protein) (SP:Q9JKP7) [Mus
musculus];
Length = 275
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 116 ENHNDAIKGSISDSENELKSSLEKDNSNNSESDEKEKYHRNFAQYHNSVQDSRSNFVNAL 175
EN ND + +D E+E ++N N+ E+D+ E N N +D ++
Sbjct: 172 ENGNDEEDENGNDEEDENDDENTEENGNDEENDD-ENTEENGNDEENEKEDEENSMEENG 230
Query: 176 KKVKETLVKDHS 187
+ +E+ +DHS
Sbjct: 231 NESEESGNEDHS 242
>At2g01680.1 68415.m00095 ankyrin repeat family protein contains
ankyrin repeat domains, Pfam:PF00023
Length = 532
Score = 30.7 bits (66), Expect = 1.5
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 72 QINMDNDNQYVAQQLRDHQLQYNGKNRKIS--LLKPSVLTEIHIKTENHNDAIKGSISDS 129
++N N+ + A L D +LQY+ +I+ L++ I E+ A+K ++SD
Sbjct: 256 EVNAINNQKETAMDLAD-KLQYSESALEINEALVEAGAKHGRFIGREDEARALKRAVSDI 314
Query: 130 ENELKSSLEKDNSNNSE----SDEKEKYHRNFAQ 159
++E++S L ++ N + E K HR Q
Sbjct: 315 KHEVQSQLLQNEKTNRRVSGIAKELRKLHREAVQ 348
>At1g33680.1 68414.m04166 KH domain-containing protein similar to
FUSE binding protein 2 GB:AAC50892 GI:1575607 from [Homo
sapiens]
Length = 759
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 88 DHQLQYNGKNRKISLLKPSVLTEIHIKTENHNDA-IKGSISDSENELKSSLEKDNSNNSE 146
D++++ NGK L+ P V+T + E + I GS ++ E++ K + + E
Sbjct: 116 DNKMEDNGKPEDNQLVTPEVVTSQDVSVEESKEVNISGSQNEGEDDSKETNDVVAQKEVE 175
Query: 147 SDEKE 151
+ KE
Sbjct: 176 NGSKE 180
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 30.3 bits (65), Expect = 2.0
Identities = 23/115 (20%), Positives = 45/115 (39%), Gaps = 2/115 (1%)
Query: 67 KSRNKQINMDNDNQYVAQQLRDHQLQYN-GKNRKISLLKPSVLTEIHIKTENHNDAIKGS 125
K NK+ N D N Q+ +D + + KN + + ++ + + D K +
Sbjct: 922 KEGNKEENKDTINTSSKQKGKDKKKKKKESKNSNMKKKEEDKKEYVNNELKKQEDNKKET 981
Query: 126 ISDSENELKSSLEKDNSNNSESDEKEKYHRNFAQYHNSVQDSRSNFVNALKKVKE 180
++LK KDN ES++ +R +Y ++ KK ++
Sbjct: 982 TKSENSKLKEE-NKDNKEKKESEDSASKNREKKEYEEKKSKTKEEAKKEKKKSQD 1035
Score = 29.9 bits (64), Expect = 2.6
Identities = 22/120 (18%), Positives = 56/120 (46%), Gaps = 4/120 (3%)
Query: 68 SRNKQINMDNDNQYVAQQLRDHQLQYNGKNRKISLLKPSVLTEIHIKTENHNDAIKGSIS 127
+ +K +N +++ ++ ++ + NG++ K L+ E +K EN ++ +
Sbjct: 401 TNDKMVNATTNDEDHKKENKEETHENNGESVKGENLENKAGNEESMKGEN----LENKVG 456
Query: 128 DSENELKSSLEKDNSNNSESDEKEKYHRNFAQYHNSVQDSRSNFVNALKKVKETLVKDHS 187
+ E + +S+E +N S +EK + + + + + + ++ VN + KD+S
Sbjct: 457 NEELKGNASVEAKTNNESSKEEKREESQRSNEVYMNKETTKGENVNIQGESIGDSTKDNS 516
Score = 29.5 bits (63), Expect = 3.4
Identities = 22/105 (20%), Positives = 47/105 (44%), Gaps = 5/105 (4%)
Query: 71 KQINMDNDNQYVAQQLRDHQLQYNGKNRKISLLKPSVLTEIHIKTENHNDAIKGSISDSE 130
K + ++ + + + RD + +G++ K + + K +N N + ++ + E
Sbjct: 797 KSVETKDNKKLSSTENRDEAKERSGEDNKEDKEESKDYQSVEAKEKNENGGVDTNVGNKE 856
Query: 131 N--ELKS--SLE-KDNSNNSESDEKEKYHRNFAQYHNSVQDSRSN 170
+ +LK S+E K N S ++E+ RN V+D +N
Sbjct: 857 DSKDLKDDRSVEVKANKEESMKKKREEVQRNDKSSTKEVRDFANN 901
>At3g21320.1 68416.m02693 hypothetical protein
Length = 540
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 133 LKSSLEKDNSNNSESDEK-EKYHRNFAQYHNSVQ 165
L LE +N N S + K + Y RNFA+++N Q
Sbjct: 177 LSERLEDENQNGSPNVMKTQSYRRNFAEFNNETQ 210
>At3g02930.1 68416.m00288 expressed protein ; expression supported
by MPSS
Length = 806
Score = 30.3 bits (65), Expect = 2.0
Identities = 42/199 (21%), Positives = 78/199 (39%), Gaps = 17/199 (8%)
Query: 1 MEVSNEIKEDIRKTQTDLKNAIRVHQNVLFKTKVKEAENEIIAIGHAQKL-VVDXXXXXX 59
+EVSN D+ TDLK I + + + KV ++E QKL + +
Sbjct: 343 LEVSNSRLHDMESEITDLKEKIELLEMTVASQKVDLEKSE-------QKLGIAEEESSKS 395
Query: 60 XXYQQCLKSRNKQINMDNDNQYVAQQLRDHQLQYNGKNRKISLLKPSVLTEIHIKTENHN 119
+ LK+ + +N + +Q +Q + +K L + E K++
Sbjct: 396 EKEAEKLKNELETVNEEKTQALKKEQDATSSVQRLLEEKKKILSELESSKEEEEKSKKAM 455
Query: 120 DAIKGS---ISDSENELKSSLEKDNSNNSES---DEKEKYHRNFAQYHNSVQDSRSN--- 170
+++ + +S ELK L N E+ D K +Y N + ++R
Sbjct: 456 ESLASALHEVSSESRELKEKLLSRGDQNYETQIEDLKLVIKATNNKYENMLDEARHEIDV 515
Query: 171 FVNALKKVKETLVKDHSEW 189
VNA+++ K+ +W
Sbjct: 516 LVNAVEQTKKQFESAMVDW 534
>At2g22610.1 68415.m02680 kinesin motor protein-related
Length = 1093
Score = 30.3 bits (65), Expect = 2.0
Identities = 25/124 (20%), Positives = 56/124 (45%), Gaps = 7/124 (5%)
Query: 66 LKSRNKQINMDNDNQYVAQQLRDHQLQYNGKNR-KISLLKPSVLTEIHIKTENHNDAIKG 124
L+ +NK + D+ + + + QLQ K+R +I + E+ K + +
Sbjct: 808 LQEKNKDLQNQLDSVHNQSEKQYAQLQERLKSRDEICSNLQQKVKELECKLRERHQSDSA 867
Query: 125 SISDSENELKSSLEKDNSNNSESDEKEKYHRNFAQYHNSVQDSRSNFVNALKKVKETLVK 184
+ + +L+++L++ ++ +K K Y N +++S N + +K+KE +K
Sbjct: 868 ANNQKVKDLENNLKESEGSSLVWQQKVK------DYENKLKESEGNSLVWQQKIKELEIK 921
Query: 185 DHSE 188
E
Sbjct: 922 HKDE 925
>At4g15030.1 68417.m02309 expressed protein
Length = 179
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 121 AIKGSISDSENELKSSLEKDNSNNSESDEKEKYHRNFAQYHN 162
A + S S SE++ ++ SES+EK+K RN +Q H+
Sbjct: 94 ACERSKSHSEDDTDEEEKRKEGERSESNEKKKQKRNRSQSHS 135
>At1g79280.1 68414.m09242 expressed protein weak similarity to
Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
Length = 2111
Score = 29.9 bits (64), Expect = 2.6
Identities = 29/129 (22%), Positives = 51/129 (39%), Gaps = 6/129 (4%)
Query: 66 LKSRNKQINMDNDNQYVAQQLRDHQLQYNGKNRKISLLKPSVLTEIHIKTEN---HNDAI 122
L R K+++ Q Q + Q Q KN+KI + + + N ++
Sbjct: 1426 LSEREKRLDDAQQAQATMQSEFNKQKQELEKNKKIHYTLNMTKRKYEKEKDELSKQNQSL 1485
Query: 123 KGSISDSENELKSSLEKD---NSNNSESDEKEKYHRNFAQYHNSVQDSRSNFVNALKKVK 179
+ +++ E D + E +EKEK + +Y + ++D LKK
Sbjct: 1486 AKQLEEAKEEAGKRTTTDAVVEQSVKEREEKEKRIQILDKYVHQLKDEVRKKTEDLKKKD 1545
Query: 180 ETLVKDHSE 188
E L K+ SE
Sbjct: 1546 EELTKERSE 1554
>At5g60210.1 68418.m07547 cytoplasmic linker protein-related
contains weak similarity to cytoplasmic linker protein
CLIP-170 (GI:2905649) [Gallus gallus]
Length = 588
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 109 TEIHIKTENHNDAIKGSISDSENELKSSLEKDNSNNSESDEKEKYHRNFAQYHNSVQDSR 168
TE+ I ++ N+ +K I SE +++ + K E+D+ K + + Q S
Sbjct: 454 TELQIVSDE-NETLKSDIHKSETDVQDAFLKLGIAMEEADKSSKKAVRVTEQLEATQASN 512
Query: 169 SNFVNALKKVK 179
S L+K+K
Sbjct: 513 SEMETELRKLK 523
>At3g58220.1 68416.m06491 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein weak similarity
to ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 487
Score = 29.5 bits (63), Expect = 3.4
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
Query: 104 KPSVLTEIHIKTENHNDAIKGSIS----DSENELKSSLEKDNSNNSESDEKEKYHRNFAQ 159
+P E + E+ D+ +GS +SE E K E D SE D +E R +
Sbjct: 260 RPRESFEYESEAESKKDSEEGSRERYEYESEEESKKDSENDCGEESEKDSEEG-SRPLKK 318
Query: 160 YHNSVQDSRSN-FVNALKKVKETL 182
+ +SN VN ++VKET+
Sbjct: 319 IKRNDDGVKSNDSVNKTQQVKETM 342
>At2g39110.1 68415.m04805 protein kinase, putative similar to
protein kinase [Lophopyrum elongatum]
gi|13022177|gb|AAK11674
Length = 435
Score = 29.5 bits (63), Expect = 3.4
Identities = 20/84 (23%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 106 SVLTEIHIKTENHNDAIKGSISDSENELKSSLEKDNSNNSESDEKEKYHRNFAQYHNSVQ 165
S+ + +H+ +E H++ +K + D +LK++ + N + S + + F + Q
Sbjct: 59 SITSSLHVLSETHSNNLKVFVLD---DLKTATK--NFSRSLMIGEGGFGGVFRGVIQNPQ 113
Query: 166 DSRSNFVNALKKVKETLVKDHSEW 189
DSR A+K++ ++ H EW
Sbjct: 114 DSRKKIDIAVKQLSRRGLQGHKEW 137
>At2g36050.1 68415.m04426 ovate protein-related contains TIGRFAM
TIGR01568 : uncharacterized plant-specific domain
TIGR01568
Length = 261
Score = 29.5 bits (63), Expect = 3.4
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 14/99 (14%)
Query: 99 KISLLKPSVLTEIHIKTENHNDAIKGS---ISDSENELKSSLEKDNSNNSESDEKEKYHR 155
++ LL P +T+ EN ++ S I +S+ E S LE+ S E DE+E
Sbjct: 55 ELDLLDPPEITD---SVENVIKGLRSSERLIFESKGETNSILEEATSKREEEDEEE---- 107
Query: 156 NFAQYHNSVQDSRSNFVNALKKVKETLVKDHSEWHEPRS 194
F + D S+F K+ E +V+ H+ H+ +S
Sbjct: 108 GFMLFSLESDDPYSDF----KRSMEEMVEAHALHHDWKS 142
>At2g25930.1 68415.m03112 hydroxyproline-rich glycoprotein family
protein identical to cDNA nematode responsive protein
GI:2213418
Length = 695
Score = 29.5 bits (63), Expect = 3.4
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Query: 67 KSRNKQINMDNDNQYVAQQLRDHQLQYNGKNRKISLLKPSVLTEIHIKTENHNDAIKGSI 126
KS + +++ N + Q+ R+ + GK R L E H+ TENH+ GS
Sbjct: 217 KSASSHDRVNDYNASLRQESRNRLYRDGGKTR---LKDTDNGAESHLATENHSQEGHGSP 273
Query: 127 SDSENELKSSLEKDNSNNSESDEK 150
D +N+ + S + ++ + +E+
Sbjct: 274 EDIDNDREYSKSRACASLQQINEE 297
>At1g64330.1 68414.m07290 myosin heavy chain-related similar to
myosin heavy chain (GI:1850913) [Entamoeba histolytica];
similar to Intracellular protein transport protein USO1
(Swiss-Prot:P25386) [Saccharomyces cerevisiae]
Length = 555
Score = 29.5 bits (63), Expect = 3.4
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 82 VAQQLRDHQLQYNGKNRKISLLKPSVLTEIHIKTENHNDAIKGSISDSENELKSSLEKDN 141
VA+ ++D +Y + L + ++H K E ND+ S SDS+++ KS
Sbjct: 59 VAELVKDFYKEYESLYHQYDDLTGEIRKKVHGKGE--NDSSSSSSSDSDSDKKSKRNGRG 116
Query: 142 SNNSESDEKEKYHRN 156
N E +K+ N
Sbjct: 117 ENEIELLKKQMEDAN 131
>At5g28400.1 68418.m03448 expressed protein
Length = 996
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 114 KTENHNDAIKGSISDSENELKSSLEKDNSNNSESDEKEK 152
K +A+KGS S+ ELKS+ K +S +E EKE+
Sbjct: 535 KLSETGNAVKGSSSNKREELKSA--KSSSGGTEHIEKEE 571
>At5g27220.1 68418.m03247 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 1181
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 6/65 (9%)
Query: 94 NGKNRKISLLKPSVLTEIHIKTENHNDAIKG------SISDSENELKSSLEKDNSNNSES 147
+G N I LL E+ IK E HN+ + I E ++ EK +S ++
Sbjct: 433 SGHNESIKLLLEEHSEELAIKEERHNEIAEAVRKLSLEIVSKEKTIQQLSEKQHSKQTKL 492
Query: 148 DEKEK 152
D EK
Sbjct: 493 DSTEK 497
>At5g10950.1 68418.m01271 cylicin-related low similarity to
SP|Q28092 Cylicin II (Multiple-band polypeptide II) {Bos
taurus}
Length = 395
Score = 29.1 bits (62), Expect = 4.5
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Query: 104 KPSVLTEIHIKTENHNDAIKGSISDSENELKS-SLEKDNS----NNSESDEKE 151
+P VL + K + D + SD E E K+ L NS NNS DEKE
Sbjct: 260 EPKVLKTNNSKADKDEDEEENETSDDEAEPKALKLSNSNSDNGENNSSDDEKE 312
>At3g59060.2 68416.m06584 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 444
Score = 29.1 bits (62), Expect = 4.5
Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Query: 95 GKNRKISLLKPSVLTEIHIKTENHNDAIKGSISDSENELKSSLEKDNSNNSESDEKEKYH 154
G+N K ++ SV I K ++ DA + S+S S+ L S+ ++ N S
Sbjct: 197 GRNNKETVSGTSVT--IDRKRKHVMDADQESVSQSDIGLTSTDDQTMGNKSSQRSGSTRR 254
Query: 155 RNFAQYHNSVQDSRSNFVNALKKVKETLV 183
A+ HN + R + +N K + L+
Sbjct: 255 SRAAEVHNLSERRRRDRINERMKALQELI 283
>At3g59060.1 68416.m06583 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 442
Score = 29.1 bits (62), Expect = 4.5
Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Query: 95 GKNRKISLLKPSVLTEIHIKTENHNDAIKGSISDSENELKSSLEKDNSNNSESDEKEKYH 154
G+N K ++ SV I K ++ DA + S+S S+ L S+ ++ N S
Sbjct: 197 GRNNKETVSGTSVT--IDRKRKHVMDADQESVSQSDIGLTSTDDQTMGNKSSQRSGSTRR 254
Query: 155 RNFAQYHNSVQDSRSNFVNALKKVKETLV 183
A+ HN + R + +N K + L+
Sbjct: 255 SRAAEVHNLSERRRRDRINERMKALQELI 283
>At3g11150.1 68416.m01351 expressed protein
Length = 371
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 121 AIKGSISDSENELKSSLEKDNSNNSESDEKEKYHR-NFAQYHNSVQDSRSNFVNALKKVK 179
++K ISD + E + + E++ + SDE+ + +F +Y V R F + L + +
Sbjct: 306 SLKDMISDGDKEEEYAEEEEEDGGARSDERRAFRPFSFKEYAWRVYQERLFFRDPLDRYR 365
Query: 180 ETLVKD 185
+KD
Sbjct: 366 IKSLKD 371
>At2g41940.1 68415.m05188 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 257
Score = 29.1 bits (62), Expect = 4.5
Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 3/81 (3%)
Query: 114 KTENHNDAIKGSISDSENELKSSLEKDNSNNSESDEKEKYHRNF--AQYHNSVQDSRSNF 171
+T ND +I D + E +KDN+NN E RNF +Q Q++
Sbjct: 62 QTTTKNDESSENIKDKDKEKDKDKDKDNNNNRRF-ECHYCFRNFPTSQALGGHQNAHKRE 120
Query: 172 VNALKKVKETLVKDHSEWHEP 192
K+ T H + H+P
Sbjct: 121 RQHAKRGSMTSYLHHHQPHDP 141
>At2g03500.1 68415.m00309 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 432
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/33 (51%), Positives = 20/33 (60%), Gaps = 4/33 (12%)
Query: 308 RQYRLYHKGTRGPCPRPPFSGGPKGPTTVVESG 340
++YRL+ TR P P P SGGP GP VV G
Sbjct: 283 QKYRLH---TRRPSPSPQTSGGP-GPHLVVLGG 311
>At1g02540.1 68414.m00205 hypothetical protein
Length = 290
Score = 29.1 bits (62), Expect = 4.5
Identities = 25/105 (23%), Positives = 39/105 (37%), Gaps = 11/105 (10%)
Query: 103 LKPSVLTEIHIKTEN----------HNDAIKGSISDSE-NELKSSLEKDNSNNSESDEKE 151
+K +VL + TEN HN+ + GS D E LE E D+
Sbjct: 24 MKKNVLDQFKFPTENNNNLVEQPPLHNNMVSGSTMDQNMEEYADELENMLDEEQEEDDDR 83
Query: 152 KYHRNFAQYHNSVQDSRSNFVNALKKVKETLVKDHSEWHEPRSDT 196
+ ++ DSRS +++ + L K E E D+
Sbjct: 84 AIQQQHPEFPLQSHDSRSTLDKHMEEYADDLEKMLDEEEEGDDDS 128
>At5g54650.2 68418.m06805 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/18 (61%), Positives = 12/18 (66%)
Query: 316 GTRGPCPRPPFSGGPKGP 333
G +GP P PP S GPK P
Sbjct: 407 GPKGPRPPPPMSLGPKAP 424
>At5g54650.1 68418.m06804 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/18 (61%), Positives = 12/18 (66%)
Query: 316 GTRGPCPRPPFSGGPKGP 333
G +GP P PP S GPK P
Sbjct: 407 GPKGPRPPPPMSLGPKAP 424
>At5g53930.1 68418.m06710 expressed protein
Length = 529
Score = 28.7 bits (61), Expect = 6.0
Identities = 19/61 (31%), Positives = 28/61 (45%)
Query: 127 SDSENELKSSLEKDNSNNSESDEKEKYHRNFAQYHNSVQDSRSNFVNALKKVKETLVKDH 186
S S++ L SS E D + K R+ +Y +S D S+ LKK K + KD
Sbjct: 44 SGSDSSLYSSSEDDYRRKKKRRSKLSKKRSRKRYSSSESDDDSDDDRLLKKKKRSKRKDE 103
Query: 187 S 187
+
Sbjct: 104 N 104
>At5g44310.2 68418.m05424 late embryogenesis abundant
domain-containing protein / LEA domain-containing
protein low similarity to 51 kDa seed maturation protein
[Glycine max] GI:414977; contains Pfam profile PF02987:
Late embryogenesis abundant protein
Length = 331
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/74 (22%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Query: 110 EIHIKTENHNDAIKGSISDSENELKSSLE--KDNSNNSESDEKEKYHRNFAQYHNSVQDS 167
++ KT+N+ + K +++ + E KD + + D KEK + QD
Sbjct: 208 DVKEKTKNYAEQTKDKVNEGASRAADKAEETKDKAKDYAEDSKEKAEDMAHGFKEKAQDI 267
Query: 168 RSNFVNALKKVKET 181
++ +K V ET
Sbjct: 268 GEKTMDTVKDVWET 281
>At5g44310.1 68418.m05423 late embryogenesis abundant
domain-containing protein / LEA domain-containing
protein low similarity to 51 kDa seed maturation protein
[Glycine max] GI:414977; contains Pfam profile PF02987:
Late embryogenesis abundant protein
Length = 295
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/74 (22%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Query: 110 EIHIKTENHNDAIKGSISDSENELKSSLE--KDNSNNSESDEKEKYHRNFAQYHNSVQDS 167
++ KT+N+ + K +++ + E KD + + D KEK + QD
Sbjct: 172 DVKEKTKNYAEQTKDKVNEGASRAADKAEETKDKAKDYAEDSKEKAEDMAHGFKEKAQDI 231
Query: 168 RSNFVNALKKVKET 181
++ +K V ET
Sbjct: 232 GEKTMDTVKDVWET 245
>At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almost
identical to CIP1 (GI:836950) [Arabidopsis thaliana]
Length = 1305
Score = 28.7 bits (61), Expect = 6.0
Identities = 21/99 (21%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
Query: 84 QQLRDHQLQYNGKNRKISLLKPSVLTEIHIKTENHNDAIKGSISDSENELKSSLEKDNSN 143
+Q+++ N + +L + +E+ IK + I+ S+SE S EKDN
Sbjct: 587 EQVKELNQNLNSSEEEKKILSQQI-SEMSIKIKRAESTIQELSSESERLKGSHAEKDNEL 645
Query: 144 NSESDEKEKYHRNFAQYHNSVQDSRSNFVNALKKVKETL 182
S D E + R + ++ + + + ++ E+L
Sbjct: 646 FSLRDIHETHQRELSTQLRGLEAQLESSEHRVLELSESL 684
>At5g40570.1 68418.m04923 surfeit locus protein 2 family protein /
SURF2 family protein contains Pfam profile PF05477:
Surfeit locus protein 2 (SURF2)
Length = 204
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/53 (28%), Positives = 26/53 (49%)
Query: 127 SDSENELKSSLEKDNSNNSESDEKEKYHRNFAQYHNSVQDSRSNFVNALKKVK 179
S S++EL +++N S D+KE + S++ S+F + KK K
Sbjct: 147 SSSDSELDEETDEENCKGSHCDDKESEELSERTKRMSLEIGPSSFASRKKKSK 199
>At5g01370.1 68418.m00050 expressed protein
Length = 427
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 113 IKTENHNDAIKGSISDSENELKSSLEKDNSN--NSESDEKE 151
+ T+ A K S S S + K+S +K+N+N N++S+E E
Sbjct: 326 LSTKQVETATKSSCSSSPAKTKTSTKKENNNSTNNDSEETE 366
>At4g35240.1 68417.m05009 expressed protein contains Pfam domains,
PF04782: Protein of unknown function (DUF632) and
PF04783: Protein of unknown function (DUF630)
Length = 828
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 117 NHNDAIKGSISDSEN-ELKSSLEKDNSNNSESDEKEKYHRNFAQYH 161
NHN A GS SDS + E S ++D ++ + D +H + +H
Sbjct: 105 NHNHAHSGSGSDSGHLEFDSDSDEDEEDDDDLDLDSLHHHSPPHHH 150
>At3g54520.1 68416.m06033 hypothetical protein
Length = 250
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/54 (24%), Positives = 30/54 (55%)
Query: 128 DSENELKSSLEKDNSNNSESDEKEKYHRNFAQYHNSVQDSRSNFVNALKKVKET 181
++ NE++S+ + S + + N +Y+N++++ N ++ LKK +ET
Sbjct: 67 ENYNEIRSNRYRFYIEAKHSTYRSRQAGNCIKYYNNLREQLQNNLDKLKKAEET 120
>At3g48940.1 68416.m05346 remorin family protein contains Pfam
domain, PF03766: Remorin, N-terminal region and Pfam
domain, PF03763: Remorin, C-terminal region
Length = 175
Score = 28.7 bits (61), Expect = 6.0
Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 7/98 (7%)
Query: 78 DNQYVAQQLRDHQLQYNGKNRKISLLKPSVLTEIHIKTENHNDAIKGSISDSENELKSSL 137
+++ V RD L ++++ISL+K E K EN S+ EN K+S+
Sbjct: 45 EDKKVGSVHRDAVLVRLEQDKRISLIKAWEEAE-KSKVENKAQKKISSVGAWENSKKASV 103
Query: 138 EKDNSNNSESDEKEKYH------RNFAQYHNSVQDSRS 169
E + E K+K H AQ H ++ R+
Sbjct: 104 EAELKKIEEQLNKKKAHYTEQMKNKIAQIHKEAEEKRA 141
>At3g22790.1 68416.m02873 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1694
Score = 28.7 bits (61), Expect = 6.0
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 5 NEIKEDIRKTQTDLKNAIRVHQNVLFKTKVKEAENEIIAIGHAQKLVVDXXXXXXXXYQQ 64
N E I + +++A QN F + +AE+EI A+ H V + YQQ
Sbjct: 296 NRCLEMISNLEKKVRDAEENAQN--FSNQSAKAEDEIKALRHELVKVNEVKDGLRLRYQQ 353
Query: 65 CLKSRNK 71
CL++ +K
Sbjct: 354 CLETISK 360
>At3g01780.1 68416.m00118 expressed protein est hit,
Length = 1176
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 99 KISLLK---PSVLTEIHIKTENHNDAIKGSISDSENELKSSLEKDNSNNSESDEKEK 152
+I+LLK P ++I ++EN + +G D + E+K EK+ + E +K++
Sbjct: 1081 RIALLKAAQPKKTSKIEEESENEEEE-EGEEEDDDEEVKEKKEKEEGKDKEEKKKKE 1136
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/77 (20%), Positives = 33/77 (42%)
Query: 76 DNDNQYVAQQLRDHQLQYNGKNRKISLLKPSVLTEIHIKTENHNDAIKGSISDSENELKS 135
D Q + + DH+ KN+ + K +V+ E+ K D +G +N+ K
Sbjct: 308 DATEQEMDDEAADHKEGKKKKNKDKAKKKETVIDEVCEKETKDKDDDEGETKQKKNKKKE 367
Query: 136 SLEKDNSNNSESDEKEK 152
+ + + D+K++
Sbjct: 368 KKSEKGEKDVKEDKKKE 384
>At5g28320.1 68418.m03438 expressed protein This is likely a
pseudogene.
Length = 967
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 114 KTENHNDAIKGSISDSENELKSSLEKDNSNNSESDEKEK 152
K A+KGS S+ ELKS+ K +S +E EKE+
Sbjct: 524 KLSETGTAVKGSSSNKREELKSA--KSSSGGTEHIEKEE 560
>At4g37820.1 68417.m05351 expressed protein Kaposi's
sarcoma-associated herpes-like virus ORF73gene, Kaposi's
sarcoma-associated herpesvirus, U52064
Length = 532
Score = 28.3 bits (60), Expect = 7.9
Identities = 19/81 (23%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 77 NDNQYVAQQLRDHQLQYN-GKNRKISLLKPSVLTEIHIKTENHNDAIKGSISDSENELKS 135
N+N+ ++ + Q + N +KI ++ + + E D K +S N+ +
Sbjct: 405 NENKETEKKSSESQRKENTNSEKKIEQVESTDSSNTQKGDEQKTDESK---RESGNDTSN 461
Query: 136 SLEKDNSNNSESDEKEKYHRN 156
+D+S+ +ES++KE+ +RN
Sbjct: 462 KETEDDSSKTESEKKEENNRN 482
>At4g31570.1 68417.m04483 expressed protein
Length = 2712
Score = 28.3 bits (60), Expect = 7.9
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Query: 74 NMDNDNQYVAQQLRDHQLQYNGKNRKI--SLLKPSVLTEIHIKTENHNDAIKGSISDSEN 131
N++N Q+ D + N + SLL S E I + ND + IS +
Sbjct: 506 NLENQLLATEAQVEDFTAKMNELQLSLEKSLLDLSETKEKFINLQVENDTLVAVISSMND 565
Query: 132 ELKSSLEKDNSNNSE 146
E K +E+ S N E
Sbjct: 566 EKKELIEEKESKNYE 580
>At4g09950.1 68417.m01628 avirulence-responsive family protein /
avirulence induced gene (AIG1) family protein similar to
AIG1 protein SP:P54120 [Arabidopsis thaliana]; contains
Pfam PF04548: AIG1 family;
Length = 336
Score = 28.3 bits (60), Expect = 7.9
Identities = 30/116 (25%), Positives = 52/116 (44%), Gaps = 10/116 (8%)
Query: 76 DNDNQYVAQ---QLRDHQLQYNGKNRKISLLKP-SVLTEI-HIKTE---NHNDAIKGSIS 127
+N Y+A +LR+++ K ++I +K S EI +K E +HN+ ++G
Sbjct: 207 NNGKSYMADLSHELRENEATIKEKQKQIEEMKGWSSKQEISQMKKELEKSHNEMLEGIKE 266
Query: 128 DSENELKSSLEKDNSNNSESD-EKEKYHRNFAQYHNSVQDSRSNFVNALKKV-KET 181
N+LK SLE +++ E+E+ + + D L K KET
Sbjct: 267 KISNQLKESLEDVKEQLAKAQAEREETEKKMNEIQKLSSDEIRRLREQLNKAEKET 322
>At4g02570.1 68417.m00351 cullin family protein similar to cullin 3
[Homo sapiens] GI:3639052; contains Pfam profile
PF00888: Cullin family
Length = 738
Score = 28.3 bits (60), Expect = 7.9
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 12/80 (15%)
Query: 251 PDFVYANYEMMPKRKKYNQFSYLQSNNDPPQTRSAK----LLFTKQIVKR-----RLAVR 301
PD++ + E + K+++ YL S+++P + ++F Q++++ R +R
Sbjct: 218 PDYMLKSEECL-KKERERVAHYLHSSSEPKLVEKVQHELLVVFASQLLEKEHSGCRALLR 276
Query: 302 F--VNRKQRQYRLYHKGTRG 319
V+ R YRLYHK RG
Sbjct: 277 DDKVDDLSRMYRLYHKILRG 296
>At1g55475.1 68414.m06345 expressed protein
Length = 120
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 123 KGSISDSENELKSSLEKDNSNNSESDEKEK 152
+G I LKSSL K +SN++E++++EK
Sbjct: 51 EGQIVGDTLTLKSSLRKVDSNSTEAEKREK 80
>At1g26330.1 68414.m03211 hypothetical protein
Length = 1196
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/51 (21%), Positives = 28/51 (54%)
Query: 113 IKTENHNDAIKGSISDSENELKSSLEKDNSNNSESDEKEKYHRNFAQYHNS 163
+K ENH I+ +S +++ + +L ++ N+ + ++ RN + ++S
Sbjct: 599 VKKENHKVYIRKRVSTNQHRINRNLSSESKNSCRNTGEDDSIRNMSPINSS 649
>At1g06230.2 68414.m00659 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 766
Score = 28.3 bits (60), Expect = 7.9
Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Query: 77 NDNQYVAQQLRDHQLQYNGKNRKISLLKPSVLTEIHIKTENHNDAIKGSISDSENELKSS 136
N Q +A H+ G N L + +++ K N S S S + S
Sbjct: 694 NSQQQMAPAPAAHEFSREGGNTAKKTLPTPLPSQVE-KQNNETSRSSSSSSSSSSSSSSD 752
Query: 137 LEKDNSNNSESDE 149
+ D+S++S SD+
Sbjct: 753 SDSDSSSSSGSDQ 765
>At1g06230.1 68414.m00658 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 766
Score = 28.3 bits (60), Expect = 7.9
Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Query: 77 NDNQYVAQQLRDHQLQYNGKNRKISLLKPSVLTEIHIKTENHNDAIKGSISDSENELKSS 136
N Q +A H+ G N L + +++ K N S S S + S
Sbjct: 694 NSQQQMAPAPAAHEFSREGGNTAKKTLPTPLPSQVE-KQNNETSRSSSSSSSSSSSSSSD 752
Query: 137 LEKDNSNNSESDE 149
+ D+S++S SD+
Sbjct: 753 SDSDSSSSSGSDQ 765
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.313 0.129 0.363
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,228,839
Number of Sequences: 28952
Number of extensions: 275548
Number of successful extensions: 1175
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 1125
Number of HSP's gapped (non-prelim): 94
length of query: 345
length of database: 12,070,560
effective HSP length: 82
effective length of query: 263
effective length of database: 9,696,496
effective search space: 2550178448
effective search space used: 2550178448
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 60 (28.3 bits)
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