Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001154-TA|BGIBMGA001154-PA|IPR010561|DIRP
(570 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g21430.1 68416.m02704 expressed protein 60 5e-09
At5g27610.1 68418.m03308 myb family transcription factor contain... 56 5e-08
At3g05380.1 68416.m00588 myb family transcription factor contain... 56 6e-08
At1g63300.1 68414.m07156 expressed protein similar to Intracellu... 32 0.89
At2g18760.1 68415.m02184 SNF2 domain-containing protein / helica... 32 1.2
At4g31880.1 68417.m04531 expressed protein 31 1.6
At4g26630.1 68417.m03837 expressed protein 31 2.1
At1g04760.1 68414.m00472 synaptobrevin family protein similar to... 31 2.1
At5g18940.2 68418.m02250 Mo25 family protein similar to SP|Q0613... 31 2.7
At5g18940.1 68418.m02249 Mo25 family protein similar to SP|Q0613... 31 2.7
At5g15280.1 68418.m01790 pentatricopeptide (PPR) repeat-containi... 30 3.6
At1g04750.1 68414.m00470 synaptobrevin family protein similar to... 30 3.6
At5g66030.2 68418.m08315 Golgi-localized GRIP domain-containing ... 30 4.8
At5g66030.1 68418.m08314 Golgi-localized GRIP domain-containing ... 30 4.8
At4g19590.1 68417.m02879 DNAJ heat shock N-terminal domain-conta... 30 4.8
At3g50580.1 68416.m05532 proline-rich family protein contains pr... 30 4.8
At1g06670.1 68414.m00707 DEIH-box RNA/DNA helicase identical to ... 30 4.8
At3g18480.1 68416.m02348 CCAAT displacement protein-related / CD... 29 6.3
At5g42400.1 68418.m05162 SET domain-containing protein (TXR7) co... 29 8.3
At3g61890.1 68416.m06951 homeobox-leucine zipper protein 12 (HB-... 29 8.3
At3g44750.1 68416.m04817 histone deacetylase, putative (HD2A) co... 29 8.3
At2g33120.1 68415.m04060 synaptobrevin-related protein / vesicl... 29 8.3
At2g32670.1 68415.m03994 synaptobrevin family protein similar to... 29 8.3
>At3g21430.1 68416.m02704 expressed protein
Length = 961
Score = 59.7 bits (138), Expect = 5e-09
Identities = 53/222 (23%), Positives = 94/222 (42%), Gaps = 11/222 (4%)
Query: 106 ILNKTPNKPPSAKKQKSPIKVQKATERNDKV-DSVGIQMQDNKS----GHRIGMRLRNLL 160
++ K N P + ++ + + T + K+ +++ ++ D ++ + + +
Sbjct: 364 VIKKQVNLPTKVRSRRKIVTEKPLTIDDGKISETIVSELSDTQTLFPNDKETAEKFSHCI 423
Query: 161 KLPKAHKWVCFEYFYSNIDKVLFDGENDFMICLKESFPQLTNRKLTRTQWSKIRRMMGKP 220
+A +W FE+FYS ID F +F+ L R LTR +W IR +GKP
Sbjct: 424 SSFRARRWCIFEWFYSAIDYPWF-ARQEFVEYLDHVGLGHVPR-LTRVEWGVIRSSLGKP 481
Query: 221 RRCSQAFFDXXXXXXXXXXXXIRYVQQQKSADVCVKDLPTEIPMQLVVGTKVTARLRRPQ 280
RR S+ F +R + + + + LP ++ L V +V L
Sbjct: 482 RRFSEQFLKEEKEKLYLYRDSVRKHYDELNTGM-REGLPMDLARPLNVSQRVIC-LHPKS 539
Query: 281 DGLFTGCIDAVDTSNNTYRITFERPKLGTHSVPDYEVLSNEP 322
+ G + VD + YRI F+ P+LG V D E + P
Sbjct: 540 REIHDGNVLTVD--HCRYRIQFDNPELGVEFVKDTECMPLNP 579
>At5g27610.1 68418.m03308 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 969
Score = 56.4 bits (130), Expect = 5e-08
Identities = 54/213 (25%), Positives = 89/213 (41%), Gaps = 10/213 (4%)
Query: 111 PNKPPSAKKQKSPIKVQKATERNDKVDSVGIQMQDNKSGHRIGMRLRNLLKLPKAHKWVC 170
P KPP+ +K +Q+ + + + + +L N L P +W
Sbjct: 494 PQKPPNRRKISLKKSLQERAKSLETTHDKPRSFKKLSEHELLQEKLSNCLSYPLVRRWCI 553
Query: 171 FEYFYSNIDKVLFDGENDFMICLKESFPQLTNRKLTRTQWSKIRRMMGKPRRCSQAFFDX 230
+E+FYS ID F + +F L R LTR +WS I+ +G+PRR SQ F
Sbjct: 554 YEWFYSAIDYPWF-AKMEFTDYLNHVGLGHAPR-LTRVEWSVIKSSLGRPRRLSQRFLQD 611
Query: 231 XXXXXXXXXXXIR-YVQQQKSADVCVKDLPTEIPMQLVVGTKVTARLRRPQDGLFTGCID 289
+R + + + V L T++ L VG +V A + ++ + G I
Sbjct: 612 ERDKLQEYRESVRKHYTELRGCATGV--LHTDLARPLSVGNRVIAIHPKTRE-IRDGKIL 668
Query: 290 AVDTSNNTYRITFERPKLGTHSVPDYEVLSNEP 322
VD +N + F+ +LG V D + + P
Sbjct: 669 TVD--HNKCNVLFD--ELGVELVMDIDCMPLNP 697
>At3g05380.1 68416.m00588 myb family transcription factor contains
Pfam profile:PF00249 Myb-like DNA-binding domain
Length = 1055
Score = 56.0 bits (129), Expect = 6e-08
Identities = 60/229 (26%), Positives = 97/229 (42%), Gaps = 14/229 (6%)
Query: 96 PRQSPKKTPKILNKTPNKPPSAKKQKSPIKVQKATERNDKVDSVGIQMQDNKSGHRIGMR 155
P+Q P L++ P QKS + K++E K + + + + +
Sbjct: 563 PKQVSDSGPTSLSQKPPNRRKKSLQKSLQEKAKSSETTHKAARSSRSLSEQEL--LLKDK 620
Query: 156 LRNLLKLPKAHKWVCFEYFYSNIDKVLFDGENDFMICLKESFPQLTNRKLTRTQWSKIRR 215
L L P A + FE+FYS ID F + +F+ L R LTR +WS I+
Sbjct: 621 LATSLSFPFARRRCIFEWFYSAIDHPWFS-KMEFVDYLNHVGLGHIPR-LTRLEWSVIKS 678
Query: 216 MMGKPRRCSQAFFDXXXXXXXXXXXXIR--YVQQQKSADVCVKDLPTEIPMQLVVGTKVT 273
+G+PRR S+ F +R Y + + A + LPT++ L VG +V
Sbjct: 679 SLGRPRRFSERFLHEEREKLKQYRESVRKHYTELRTGAR---EGLPTDLARPLAVGNRVI 735
Query: 274 ARLRRPQDGLFTGCIDAVDTSNNTYRITFERPKLGTHSVPDYEVLSNEP 322
A + ++ + G I VD +N + F+ LG V D + + P
Sbjct: 736 AIHPKTRE-IHDGKILTVD--HNKCNVLFD--DLGVELVMDIDCMPLNP 779
>At1g63300.1 68414.m07156 expressed protein similar to Intracellular
protein transport protein USO1 (Swiss-Prot:P25386)
[Saccharomyces cerevisiae]; similar to Myosin II heavy
chain, non muscle (Swiss-Prot:P08799) [Dictyostelium
discoideum]
Length = 1029
Score = 32.3 bits (70), Expect = 0.89
Identities = 22/84 (26%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 477 EASVLVEKNNNGVIQDPSVLDLI---TDLTALMLQVRSLSDSDQNAYELSVLQGTMDQIK 533
EA +++ N I+ S + L+ ++ A LQV L+ D+ +S+LQ ++ ++
Sbjct: 770 EAEASLQRENMKKIELESKISLMRKESESLAAELQVIKLA-KDEKETAISLLQTELETVR 828
Query: 534 MKLKPQYHRLFQNNVEIHMHKIQM 557
+ H L +N++E+ HK Q+
Sbjct: 829 SQCDDLKHSLSENDLEMEKHKKQV 852
>At2g18760.1 68415.m02184 SNF2 domain-containing protein / helicase
domain-containing protein similar to SP|Q03468 Excision
repair protein ERCC-6 (Cockayne syndrome protein CSB)
{Homo sapiens}; contains PFam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain
Length = 1187
Score = 31.9 bits (69), Expect = 1.2
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Query: 69 LNARGMPARIRKKNRFIFVDDFVNTSPPRQSPKKTPKILNKTPNKPPS-AKKQKSPIKVQ 127
+ + + A+ R + + +D PP +P + + L KTPN P + AKK+K+ K +
Sbjct: 256 VQSMSLAAKARPTTKLLDAEDLPKLEPPT-APFRRLRKLYKTPNSPDNEAKKRKAGKKSK 314
Query: 128 KATERNDKVDSVGIQMQDNK-SGHRIGMRL 156
K +K I +D+ G G R+
Sbjct: 315 KTRPLPEKKWRKRISREDSSLQGSGDGRRI 344
>At4g31880.1 68417.m04531 expressed protein
Length = 873
Score = 31.5 bits (68), Expect = 1.6
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 87 VDDFVNTSPPRQSPKKTPKILNKTPNKP--PSAKKQKSPIKVQKATER 132
V + NTS P+ + K K+ + + KP P +KK S KV K +E+
Sbjct: 476 VSEEPNTSEPQVTKKSGKKVASSSKTKPTVPPSKKSTSETKVAKQSEK 523
>At4g26630.1 68417.m03837 expressed protein
Length = 763
Score = 31.1 bits (67), Expect = 2.1
Identities = 36/136 (26%), Positives = 51/136 (37%), Gaps = 11/136 (8%)
Query: 3 DKSEREYDELSTPPRSLQKVKXXXXXXXXXXXXXXXXXXXXXXXXXXHRVGTKLPPKPAP 62
DKSE DE P S +K + R K A
Sbjct: 555 DKSE---DEAPQPSESEEKDESEEHSEEETTKKKRGSRLSAGKKESAGRARNKKAVVAAK 611
Query: 63 SEPVQKLNARGMPARIRKKNRFIFVDDFVNTSPPRQSP-KKTPKILNKTPNKPPSAKKQK 121
S P +K+ + A+ RKK DD +TSP S KK+ + +P SA K+K
Sbjct: 612 SSPPEKITQKRSSAK-RKKT-----DDDSDTSPKASSKRKKSENPIKASPAPSKSASKEK 665
Query: 122 SPIKVQKATER-NDKV 136
+ K ++ +DKV
Sbjct: 666 PVKRAGKGKDKPSDKV 681
>At1g04760.1 68414.m00472 synaptobrevin family protein similar to
Vesicle-associated membrane protein 722 (AtVAMP722)
Synaptobrevin-related protein 1 (SP:P47192) {Arabidopsis
thaliana}
Length = 220
Score = 31.1 bits (67), Expect = 2.1
Identities = 22/90 (24%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 414 SFGQRMPEDFERKYAAVVIELERMNMDLQEYINEIQHHCQQIAPGPCLAAMLAPSQLRDK 473
+F +R+ EDF ++Y + N +E+ ++++ H Q A P + L S+++ +
Sbjct: 80 AFLERVKEDFNKRYGGGKASTAKANSLNKEFGSKLKEHMQYCADHPEEISKL--SKVKAQ 137
Query: 474 CHEEASVLVEKNNNGVIQDPSVLDLITDLT 503
E V++E N V+ ++L+ D T
Sbjct: 138 VTEVKGVMME-NIEKVLDRGEKIELLVDKT 166
>At5g18940.2 68418.m02250 Mo25 family protein similar to SP|Q06138
MO25 protein {Mus musculus}; contains Pfam profile
PF03204: Mo25 protein family
Length = 323
Score = 30.7 bits (66), Expect = 2.7
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 126 VQKATERNDKVDSVGIQMQDNKSGHRIGMRLRNLLKLPKAHKWV----CFEYFYSNIDKV 181
VQ E + +DS+ + + + G LR +K P K++ CFE F+ ++
Sbjct: 120 VQYFEEHFELLDSLVVCYDNKEIALHCGSMLRECIKFPSLAKYILESACFELFFKFVELP 179
Query: 182 LFDGENDFMICLKE 195
FD +D K+
Sbjct: 180 NFDVASDAFSTFKD 193
>At5g18940.1 68418.m02249 Mo25 family protein similar to SP|Q06138
MO25 protein {Mus musculus}; contains Pfam profile
PF03204: Mo25 protein family
Length = 345
Score = 30.7 bits (66), Expect = 2.7
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 126 VQKATERNDKVDSVGIQMQDNKSGHRIGMRLRNLLKLPKAHKWV----CFEYFYSNIDKV 181
VQ E + +DS+ + + + G LR +K P K++ CFE F+ ++
Sbjct: 120 VQYFEEHFELLDSLVVCYDNKEIALHCGSMLRECIKFPSLAKYILESACFELFFKFVELP 179
Query: 182 LFDGENDFMICLKE 195
FD +D K+
Sbjct: 180 NFDVASDAFSTFKD 193
>At5g15280.1 68418.m01790 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 1227
Score = 30.3 bits (65), Expect = 3.6
Identities = 15/52 (28%), Positives = 27/52 (51%)
Query: 317 VLSNEPPDTICLTSITQRFRPRKVIQDLLSLYSPIQKNSQGDPLIGCSDLAN 368
V + P D + TS+ + F ++ + DLL+++ Q ++ L C DL N
Sbjct: 626 VQMHHPIDNVTYTSLIRCFCKKETLNDLLNVWGAAQNDNWLPDLNDCGDLWN 677
>At1g04750.1 68414.m00470 synaptobrevin family protein similar to
Vesicle-associated membrane protein 722 (AtVAMP722)
Synaptobrevin-related protein 1 (SP:P47192) {Arabidopsis
thaliana};
Length = 219
Score = 30.3 bits (65), Expect = 3.6
Identities = 22/90 (24%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 414 SFGQRMPEDFERKYAAVVIELERMNMDLQEYINEIQHHCQQIAPGPCLAAMLAPSQLRDK 473
SF +R+ EDF ++Y + N +E+ ++++ H Q P + LA +++ +
Sbjct: 80 SFLERVKEDFNKRYGGGKAATAQANSLNKEFGSKLKEHMQYCMDHPDEISKLA--KVKAQ 137
Query: 474 CHEEASVLVEKNNNGVIQDPSVLDLITDLT 503
E V++E N V+ ++L+ D T
Sbjct: 138 VSEVKGVMME-NIEKVLDRGEKIELLVDKT 166
>At5g66030.2 68418.m08315 Golgi-localized GRIP domain-containing
protein contains Pfam profile PF01465: GRIP domain;
supporting cDNA gi|20303028|gb|AF499634.1|
Length = 765
Score = 29.9 bits (64), Expect = 4.8
Identities = 42/191 (21%), Positives = 74/191 (38%), Gaps = 10/191 (5%)
Query: 334 RFRPRKVIQDLLSLYSPIQKNSQGDPLIGCSDLANQANSVIGSYPFRFLELIVKLRRLLN 393
R + ++ L YS SQ + S + + + I ++ +L K RL
Sbjct: 105 RVAAEQALEHLREAYSEADAKSQ-EYSSKFSQVEQKLDQEIKERDEKYADLDAKFTRLHK 163
Query: 394 AKKSKINKLKEYNCMAEKRKSFGQRMPEDFERKYAAVVIELERMNMDLQEYINEIQHHCQ 453
K +I ++++ + R E +++++ ELER E + + Q
Sbjct: 164 RAKQRIQEIQKEKDDLDARFREVNETAERASSQHSSMQQELERTRQQANEALKAMDAERQ 223
Query: 454 QIAPGPCLAAMLAPSQLRDKCHEEASVLVEKNNNGVIQDPSVLDLITDLTALMLQVRSLS 513
Q+ A ++LRD E L K N S+LD L L Q++++
Sbjct: 224 QLRS--------ANNKLRDTIEELRGSLQPKENKIETLQQSLLDKDQILEDLKKQLQAVE 275
Query: 514 DSDQNAY-ELS 523
+ Q A ELS
Sbjct: 276 ERKQIAVTELS 286
>At5g66030.1 68418.m08314 Golgi-localized GRIP domain-containing
protein contains Pfam profile PF01465: GRIP domain;
supporting cDNA gi|20303028|gb|AF499634.1|
Length = 788
Score = 29.9 bits (64), Expect = 4.8
Identities = 42/191 (21%), Positives = 74/191 (38%), Gaps = 10/191 (5%)
Query: 334 RFRPRKVIQDLLSLYSPIQKNSQGDPLIGCSDLANQANSVIGSYPFRFLELIVKLRRLLN 393
R + ++ L YS SQ + S + + + I ++ +L K RL
Sbjct: 105 RVAAEQALEHLREAYSEADAKSQ-EYSSKFSQVEQKLDQEIKERDEKYADLDAKFTRLHK 163
Query: 394 AKKSKINKLKEYNCMAEKRKSFGQRMPEDFERKYAAVVIELERMNMDLQEYINEIQHHCQ 453
K +I ++++ + R E +++++ ELER E + + Q
Sbjct: 164 RAKQRIQEIQKEKDDLDARFREVNETAERASSQHSSMQQELERTRQQANEALKAMDAERQ 223
Query: 454 QIAPGPCLAAMLAPSQLRDKCHEEASVLVEKNNNGVIQDPSVLDLITDLTALMLQVRSLS 513
Q+ A ++LRD E L K N S+LD L L Q++++
Sbjct: 224 QLRS--------ANNKLRDTIEELRGSLQPKENKIETLQQSLLDKDQILEDLKKQLQAVE 275
Query: 514 DSDQNAY-ELS 523
+ Q A ELS
Sbjct: 276 ERKQIAVTELS 286
>At4g19590.1 68417.m02879 DNAJ heat shock N-terminal
domain-containing protein protein YJL162c, Saccharomyces
cerevisiae, PIR2:S56945; contains Pfam PF00226: DnaJ
domain;
Length = 345
Score = 29.9 bits (64), Expect = 4.8
Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 8/80 (10%)
Query: 55 KLPPKPAPSEPVQKLNARGMPARIRKKNRFIFVDDFVNTSPPRQS--PKKTPKILNKTPN 112
K PPK P++P Q+ N + P +K+ PP Q P+ PK P
Sbjct: 134 KQPPKKPPNQPKQQPNQQKQPPDQQKQ------PPNQPRQPPNQQKQPQNEPKQPPNQPK 187
Query: 113 KPPSAKKQKSPIKVQKATER 132
+PP+ + +K T +
Sbjct: 188 QPPNQASTNGRARSKKPTSK 207
>At3g50580.1 68416.m05532 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 265
Score = 29.9 bits (64), Expect = 4.8
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 94 SPPRQSPKKTPKILNKTPNKP-PSAKKQKSP 123
SPP +PKK+P + TP P P+ KK SP
Sbjct: 98 SPPPPTPKKSPSPPSLTPFVPHPTPKKSPSP 128
>At1g06670.1 68414.m00707 DEIH-box RNA/DNA helicase identical to
DEIH-box RNA/DNA helicase GB:BAA84364 GI:5881579
[Arabidopsis thaliana]
Length = 1576
Score = 29.9 bits (64), Expect = 4.8
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 108 NKTPNKPPSAKKQKSPIKVQKATERNDKVDSVGIQMQDNKSG 149
N P K P KK+K +K+ S + Q NKSG
Sbjct: 1523 NTAPAKKPKKKKRKLANNFDSVNNMEEKMPSTNVLSQGNKSG 1564
>At3g18480.1 68416.m02348 CCAAT displacement protein-related /
CDP-related similar to CCAAT displacement protein (CDP)
(Cut-like 1) (Swiss-Prot:P39880) [Homo sapiens];
contains Pfam:PF00904 Involucrin repeat
Length = 689
Score = 29.5 bits (63), Expect = 6.3
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 4/104 (3%)
Query: 424 ERKYAAVVIELERMNMDLQEYINEIQHHCQQIAPGPCLAAMLAPSQLRDKCHEEASVLVE 483
+RK + V E +M ++L+E+ E H Q A L QL + E+ +VE
Sbjct: 134 DRKLSEVESENRKMKVELEEFRTEATHLKNQQATIRRLEE--RNRQLEQQMEEKIKEVVE 191
Query: 484 -KNNNGVIQDPSVLDLITDL-TALMLQVRSLSDSDQNAYELSVL 525
K N ++ ++L+ D AL Q+R DS +L L
Sbjct: 192 IKQRNLAEENQKTMELLKDREQALQDQLRQAKDSVSTMQKLHEL 235
>At5g42400.1 68418.m05162 SET domain-containing protein (TXR7)
contains Pfam profile PF00856: SET domain
Length = 1423
Score = 29.1 bits (62), Expect = 8.3
Identities = 15/66 (22%), Positives = 26/66 (39%), Gaps = 1/66 (1%)
Query: 390 RLLNAKKSKINKLKEYNCMAEKRKSFGQRMPEDFERKYAAVVIELERMNMDLQEYINEIQ 449
R++NA+KS ++ + C + + + KY V +E +
Sbjct: 397 RVINAEKSVVSNTESAGCKNTMNEGGHSSIAAE-SSKYTKSVGSIENFQTSCSAVCRTLH 455
Query: 450 HHCQQI 455
HHC QI
Sbjct: 456 HHCMQI 461
>At3g61890.1 68416.m06951 homeobox-leucine zipper protein 12 (HB-12)
/ HD-ZIP transcription factor 12 identical to
homeobox-leucine zipper protein ATHB-12 (GI:6899887)
[Arabidopsis thaliana]
Length = 235
Score = 29.1 bits (62), Expect = 8.3
Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 403 KEYNCMAEKRKSFGQRMPEDFERKYAAVVIELERMNMDLQEYINEIQHHC 452
KEYN + + + E +++ ++V EL+R+N ++Q E H C
Sbjct: 89 KEYNTLRANYNNLASQF-EIMKKEKQSLVSELQRLNEEMQRPKEEKHHEC 137
>At3g44750.1 68416.m04817 histone deacetylase, putative (HD2A)
contains Pfam domain, PF00096: Zinc finger, C2H2 type;
identical to cDNA putative histone deacetylase (HD2A)
GI:11066134
Length = 245
Score = 29.1 bits (62), Expect = 8.3
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 88 DDFVNTSPPRQSPKKTPKILNKT-PNKPPSAKKQKSPIKVQKATER 132
+D P + P + K N+T P P SAKK K + QK E+
Sbjct: 156 EDSEEEEPTPKKPASSKKRANETTPKAPVSAKKAKVAVTPQKTDEK 201
>At2g33120.1 68415.m04060 synaptobrevin-related protein /
vesicle-associated membrane protein 722 (VAMP722) (SAR1)
identical to r to Vesicle-associated membrane protein
722 (AtVAMP722) Synaptobrevin-related protein 1
(SP:P47192) {Arabidopsis thaliana}; identical to cDNA
synaptobrevin-related protein (SAR1) GI:600709
Length = 221
Score = 29.1 bits (62), Expect = 8.3
Identities = 21/90 (23%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 414 SFGQRMPEDFERKYAAVVIELERMNMDLQEYINEIQHHCQQIAPGPCLAAMLAPSQLRDK 473
+F +R+ EDF ++Y + N +E+ ++++ H Q P + LA +++ +
Sbjct: 80 AFLERVKEDFNKRYGGGKAATAQANSLNKEFGSKLKEHMQYCMDHPDEISKLA--KVKAQ 137
Query: 474 CHEEASVLVEKNNNGVIQDPSVLDLITDLT 503
E V++E N V+ ++L+ D T
Sbjct: 138 VSEVKGVMME-NIEKVLDRGEKIELLVDKT 166
>At2g32670.1 68415.m03994 synaptobrevin family protein similar to
vesicle-associated membrane protein 7 [Rattus
norvegicus] GI:9502258, SP|P51809 Synaptobrevin-like
protein 1 {Homo sapiens}; contains Pfam profile PF00957:
Synaptobrevin
Length = 285
Score = 29.1 bits (62), Expect = 8.3
Identities = 21/90 (23%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 414 SFGQRMPEDFERKYAAVVIELERMNMDLQEYINEIQHHCQQIAPGPCLAAMLAPSQLRDK 473
+F +R+ EDF ++Y + N +E+ ++++ H Q P + LA +++ +
Sbjct: 145 AFLERVKEDFNKRYGGGKATTAQANSLNREFGSKLKEHMQYCVDHPDEISKLA--KVKAQ 202
Query: 474 CHEEASVLVEKNNNGVIQDPSVLDLITDLT 503
E V++E N V+ ++L+ D T
Sbjct: 203 VTEVKGVMME-NIEKVLDRGEKIELLVDKT 231
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.319 0.134 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,839,796
Number of Sequences: 28952
Number of extensions: 535988
Number of successful extensions: 1920
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 1895
Number of HSP's gapped (non-prelim): 33
length of query: 570
length of database: 12,070,560
effective HSP length: 85
effective length of query: 485
effective length of database: 9,609,640
effective search space: 4660675400
effective search space used: 4660675400
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 62 (29.1 bits)
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