Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001154-TA|BGIBMGA001154-PA|IPR010561|DIRP
(570 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_41211| Best HMM Match : PBP_GOBP (HMM E-Value=0.82) 91 3e-18
SB_17911| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 2e-13
SB_41209| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 2e-13
SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.12
SB_9343| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.20
SB_3502| Best HMM Match : zf-DBF (HMM E-Value=4.9) 35 0.20
SB_4777| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.47
SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.62
SB_52978| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.82
SB_31082| Best HMM Match : Motilin_ghrelin (HMM E-Value=0.23) 32 1.1
SB_47680| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.1
SB_51279| Best HMM Match : Filament (HMM E-Value=0.092) 31 1.9
SB_52478| Best HMM Match : NHL (HMM E-Value=1e-27) 31 1.9
SB_50003| Best HMM Match : PAN (HMM E-Value=0.044) 31 2.5
SB_11561| Best HMM Match : HAT (HMM E-Value=1.1) 31 2.5
SB_44647| Best HMM Match : C_tripleX (HMM E-Value=0.00011) 31 3.3
SB_40587| Best HMM Match : DEP (HMM E-Value=7.4e-16) 30 4.4
SB_10378| Best HMM Match : TSGP1 (HMM E-Value=2) 30 4.4
SB_59802| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.8
SB_21034| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.8
SB_39577| Best HMM Match : DUF1213 (HMM E-Value=0.54) 30 5.8
SB_28308| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.6
SB_12695| Best HMM Match : Linker_histone (HMM E-Value=1.6e-38) 29 7.6
SB_58943| Best HMM Match : rve (HMM E-Value=6.1e-13) 29 7.6
SB_44588| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.6
SB_44186| Best HMM Match : HEAT (HMM E-Value=1.8e-05) 29 7.6
SB_20227| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.6
SB_17975| Best HMM Match : Rho_N (HMM E-Value=0.0017) 29 7.6
SB_17373| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.6
SB_4587| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.6
>SB_41211| Best HMM Match : PBP_GOBP (HMM E-Value=0.82)
Length = 301
Score = 90.6 bits (215), Expect = 3e-18
Identities = 56/166 (33%), Positives = 92/166 (55%), Gaps = 19/166 (11%)
Query: 382 LELIVKLRRLLNAKKSKINKLKEYNCMAEKRKSFGQRMPEDFERKYAAVVIELERMNMDL 441
L L +L ++L KK I KL++ N AEK KS+ + +DF+R+YA VV+ELER+N
Sbjct: 86 LVLQTRLSKILLVKKECIEKLRDMNTKAEKMKSYQDPIDKDFQRQYACVVLELERLN--- 142
Query: 442 QEYINEIQHHCQQIAPGPCLAAMLAPSQLRDKCHEEASVLVEKNN----NGVIQDPSVLD 497
++AP L + ++ KC EEA V+VE+ N ++ L+
Sbjct: 143 ------------KLAPDHGLHTIDQTVSVKRKCDEEAKVMVEQLNMKMGQQAVRHRPTLE 190
Query: 498 LITDLTALMLQVRSLSDSDQNAYELSVLQGTMDQIKMKLKPQYHRL 543
+I LT+++LQ++SL+++D N +E L +++IK + P RL
Sbjct: 191 VINGLTSILLQIKSLAENDLNTFEFKSLSDAVEEIKKTIDPSNIRL 236
>SB_17911| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 74.9 bits (176), Expect = 2e-13
Identities = 34/47 (72%), Positives = 40/47 (85%)
Query: 272 VTARLRRPQDGLFTGCIDAVDTSNNTYRITFERPKLGTHSVPDYEVL 318
+TARLR PQDGLFTG I+AVDT N +YR+TF+ P LGTH+VPD EVL
Sbjct: 6 LTARLRWPQDGLFTGQIEAVDTQNASYRVTFDGPGLGTHTVPDTEVL 52
>SB_41209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 74.9 bits (176), Expect = 2e-13
Identities = 34/47 (72%), Positives = 40/47 (85%)
Query: 272 VTARLRRPQDGLFTGCIDAVDTSNNTYRITFERPKLGTHSVPDYEVL 318
+TARLR PQDGLFTG I+AVDT N +YR+TF+ P LGTH+VPD EVL
Sbjct: 6 LTARLRWPQDGLFTGQIEAVDTQNASYRVTFDGPGLGTHTVPDTEVL 52
>SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4856
Score = 35.5 bits (78), Expect = 0.12
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 95 PPRQSPKKTPKILNKTPNKPPSAKKQKSPIKVQKATERNDKVDSVGIQMQDNKSG 149
PPR+ PK TP+KP + ++ S ++KA E +D G+++ K G
Sbjct: 1167 PPRKKPKNKGNKSPSTPSKPAMSARRDSEENIEKALEAG--LDQFGVEVLQEKEG 1219
>SB_9343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 34.7 bits (76), Expect = 0.20
Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 9/130 (6%)
Query: 95 PPRQSPKKTPKILNKTPNKPPSAKKQKSPIKVQKAT--ERNDKVDSVGIQMQDNKSGHRI 152
PP+Q KTPK K P K S + KS I +K T E +D+ ++ D K ++
Sbjct: 514 PPKQQATKTPK-AEKPPKKSASKRSAKSKIVAKKKTIEEDSDEEETAKAMTYDEK--RQL 570
Query: 153 GMRLRNLLKLPKAHKWVCFEYFYSNIDKVLFDGENDFMICLKESFPQLTNRKLTRTQWSK 212
+ + N L PK + V + + +K L D D + E+ T R+L + S
Sbjct: 571 SLDI-NRLPGPKLGRVV---HIIQSREKQLRDSNPDEIEIDFETLAPSTLRELEKYVQSC 626
Query: 213 IRRMMGKPRR 222
+R+ P +
Sbjct: 627 LRKKHKTPAK 636
>SB_3502| Best HMM Match : zf-DBF (HMM E-Value=4.9)
Length = 476
Score = 34.7 bits (76), Expect = 0.20
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 311 SVPDYEVLSNEPPDTICLTSITQRFRPRKVIQDLLSLYSPIQKNSQGDPLIGCSDLANQA 370
S DY+ S+ P + T + F PRK+ + LS P++ N Q + GC+ ++Q
Sbjct: 17 SPEDYD--SSPLPSSAVSTELNDPFVPRKMSKGCLSSRVPLEMNRQCSNVAGCAAKSDQF 74
Query: 371 NSVIGS 376
N V S
Sbjct: 75 NEVTRS 80
>SB_4777| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 402
Score = 33.5 bits (73), Expect = 0.47
Identities = 13/18 (72%), Positives = 16/18 (88%)
Query: 256 KDLPTEIPMQLVVGTKVT 273
KDLP E+P+ LV+GTKVT
Sbjct: 384 KDLPEEVPLPLVIGTKVT 401
>SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2149
Score = 33.1 bits (72), Expect = 0.62
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Query: 92 NTSPPRQSPKKTPKILNKTPNKPPSAKKQKSPIKVQKATER----NDKVDSVGIQMQDNK 147
++SPP+ T ++ P KPPS K K PI K R N+ D G+ +
Sbjct: 1510 SSSPPKPVKPSTKPVVPVKPVKPPSPIKPKPPIPSSKPARRGSGSNNNSDDAGVGIYSEA 1569
Query: 148 SGHR 151
S R
Sbjct: 1570 SPTR 1573
>SB_52978| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 879
Score = 32.7 bits (71), Expect = 0.82
Identities = 18/73 (24%), Positives = 33/73 (45%)
Query: 87 VDDFVNTSPPRQSPKKTPKILNKTPNKPPSAKKQKSPIKVQKATERNDKVDSVGIQMQDN 146
+D+ ++ S + PKKTP L + +KP ++ K + + TE N K+ N
Sbjct: 590 IDEGLDFSSKQTKPKKTPIFLQGSIDKPKPPEEPKKKNENELLTENNRKMSGASSTRSKN 649
Query: 147 KSGHRIGMRLRNL 159
+ ++NL
Sbjct: 650 SVSYDFKESVQNL 662
>SB_31082| Best HMM Match : Motilin_ghrelin (HMM E-Value=0.23)
Length = 565
Score = 32.3 bits (70), Expect = 1.1
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 94 SPPRQSPKKTPKILNKTPNKPPSAKKQKSPIKVQKATERND 134
SP QS TPK+ ++ ++PPS ++SP + TE+ +
Sbjct: 525 SPKSQSRPSTPKVGSRPSSRPPSGSPRQSPQPSIETTEQTE 565
>SB_47680| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2749
Score = 32.3 bits (70), Expect = 1.1
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 9/79 (11%)
Query: 56 LPPKPAPSEPVQKLNARGMPARIRKKNRFIFVDDFVNTSPPRQSPKKTPKILNKTPNKPP 115
LPP P P PV IR + +F DDF + + + K K+ +K +K
Sbjct: 899 LPPAPPP--PVDHAL---FDTSIRPPS--LFSDDFEDVTRVKPKTKSELKVKSKPAHK-- 949
Query: 116 SAKKQKSPIKVQKATERND 134
S KKQ SPIK+ A + N+
Sbjct: 950 SHKKQTSPIKMFSADDANN 968
>SB_51279| Best HMM Match : Filament (HMM E-Value=0.092)
Length = 778
Score = 31.5 bits (68), Expect = 1.9
Identities = 25/112 (22%), Positives = 49/112 (43%), Gaps = 4/112 (3%)
Query: 395 KKSKINKLKEYNCMAEKRKSFGQRMPEDFERKYAAVVIELERMNMDLQEYINEIQHHCQQ 454
+ S + LKEYN +AE +S + M E+ + + + + ++Q+ IN+++
Sbjct: 303 QSSYVKLLKEYNDLAEGYESLRRHMDEE-TKFHQEQTSQNAALMAEMQDTINQLRLQLAD 361
Query: 455 IAPGPCLAAMLAPSQL---RDKCHEEASVLVEKNNNGVIQDPSVLDLITDLT 503
G + A S + R A +L N IQ +V D++ ++
Sbjct: 362 AMAGRTGSPARASSSIMFSRLDAERNAKILTRAMNERRIQQENVTDVVNTMS 413
>SB_52478| Best HMM Match : NHL (HMM E-Value=1e-27)
Length = 1387
Score = 31.5 bits (68), Expect = 1.9
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 269 GTKVTARLRRPQDGLFTGCIDAVDTSNNTYRITFERPKLGTHSVPDYEVLSNEPPDTICL 328
G VT R+ P+ L + ID D + Y +TF LG HSV + V +N ++
Sbjct: 1050 GDCVTVRISDPKGKLLSNDID--DRRDGRYNVTFTPQSLGYHSVSVF-VNNNPIKNSPFT 1106
Query: 329 TSITQRFRPRKV 340
+ +R++ ++V
Sbjct: 1107 VDVRERYQLKQV 1118
>SB_50003| Best HMM Match : PAN (HMM E-Value=0.044)
Length = 286
Score = 31.1 bits (67), Expect = 2.5
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Query: 55 KLPPKPAPSEPVQKLNARGMPARIRKKNRFIFVDDFVNTSPPRQSPKKTPKILNKTPNKP 114
+LPP P P+ +K P ++ + + V ++PP+Q P+ T +T
Sbjct: 55 QLPPAPQPTANPEKAEE---PQPLKPLDNYTSAAAAVPSTPPKQDPRST-VAFGRTTKSS 110
Query: 115 PSAKKQKSPIKVQKATERNDKV 136
P K V++ + ND+V
Sbjct: 111 PVQKSPSRVGHVRRYSLENDQV 132
>SB_11561| Best HMM Match : HAT (HMM E-Value=1.1)
Length = 409
Score = 31.1 bits (67), Expect = 2.5
Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 2/83 (2%)
Query: 60 PAPSEPVQKLNARGMPARIRKKNRFIFVDDFVNTSPPRQSPKKTPKILNK-TPNKPPSAK 118
P PS+ K+ + P ++ K P+ +PK TPK+ K TP P
Sbjct: 41 PEPSKVTPKVTPKVTP-KVTPKVTPKVTPKVTPKVTPKVTPKVTPKVTPKVTPKVTPKVT 99
Query: 119 KQKSPIKVQKATERNDKVDSVGI 141
+ +P K T + V S G+
Sbjct: 100 PKVTPKVTPKVTPKVTAVSSAGL 122
>SB_44647| Best HMM Match : C_tripleX (HMM E-Value=0.00011)
Length = 812
Score = 30.7 bits (66), Expect = 3.3
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Query: 61 APSEPVQKLNARGMPARIRKKNRFIFVDDFVNTSPPRQSPKKTPKILNKTPNKPPS-AKK 119
AP +K + + + + K++ + D + S P PK + N P K AKK
Sbjct: 258 APHHEEKKEDLKEVVIKQSKQDEATAIKDSKSESKPASKPK-LKAVQNDAPKKANKPAKK 316
Query: 120 QKSPIKVQKATERNDKVDSV 139
K P+K K K+D++
Sbjct: 317 AKKPVKRAKKVLNKKKMDTL 336
>SB_40587| Best HMM Match : DEP (HMM E-Value=7.4e-16)
Length = 625
Score = 30.3 bits (65), Expect = 4.4
Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
Query: 467 PSQLRDKCHEEASVLVEKNNNGVIQDPSVL-DLITDLTALMLQVRSLSDSDQNAYELSVL 525
PS +EA+VL + V Q P++L L L+ + V S D ++ E V
Sbjct: 391 PSSTDSSLEKEATVLQPRARTPVNQSPNILKSLFNKLSGKISGVSLSSSQDSSSSESQVS 450
Query: 526 QGTMD---QIKMKLKPQYHRLFQNNVEIH 551
++ Q+ +L HR F + ++++
Sbjct: 451 HPAIETPRQLGFQLSADDHRSFDHRLQLY 479
>SB_10378| Best HMM Match : TSGP1 (HMM E-Value=2)
Length = 114
Score = 30.3 bits (65), Expect = 4.4
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Query: 95 PPRQSPKKTPKILNKTPNKPPSAKKQKSPIKVQKATE-RNDKVDSVGIQMQDNKSGHR 151
P Q K P K P KP KK K P K +K + R K G ++ + GH+
Sbjct: 51 PATQYGKWRPYESKKKPKKPRKPKKPKKPRKPKKPKKPRKPKKPKKGKWRKNKQGGHK 108
>SB_59802| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3213
Score = 29.9 bits (64), Expect = 5.8
Identities = 20/85 (23%), Positives = 36/85 (42%)
Query: 367 ANQANSVIGSYPFRFLELIVKLRRLLNAKKSKINKLKEYNCMAEKRKSFGQRMPEDFERK 426
A A +GS LI + + L S+ N ++E+ A++ G ED K
Sbjct: 2529 AQVAEETLGSTFADVETLIAQNQELQTEIDSRANSVEEFQSRADQLLGSGNPSAEDIRNK 2588
Query: 427 YAAVVIELERMNMDLQEYINEIQHH 451
+ V +R+ L+ ++QH+
Sbjct: 2589 SSHVRDTWDRLGASLRTRTQQLQHN 2613
>SB_21034| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1101
Score = 29.9 bits (64), Expect = 5.8
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Query: 95 PPRQSPKKTPKILNKTPNKPPSAKKQK-SPIKVQKATERNDKVDSVGIQMQDNKSGHRIG 153
P + SP P +TP PP + K + +K+ E+ND + S + + GH
Sbjct: 903 PQQPSPSPEPAAPTETPESPPDGEGDKGGEGESEKSKEKNDDLTS-----KMHVLGHDEN 957
Query: 154 MRLRNLLKLP 163
+R ++L LP
Sbjct: 958 IRTKSLEHLP 967
>SB_39577| Best HMM Match : DUF1213 (HMM E-Value=0.54)
Length = 240
Score = 29.9 bits (64), Expect = 5.8
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 96 PRQSPKKTPKILNKTPNKPPSAKKQKSPIKVQKATER 132
P+ SPK +PK KT +K QK+ + + T R
Sbjct: 138 PKTSPKSSPKTSPKTSSKTSLKTSQKTSLNASRKTSR 174
>SB_28308| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 272
Score = 29.5 bits (63), Expect = 7.6
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 108 NKTPNKPPSAKKQKSPIKVQKATERNDKVDSVGIQMQ-DNKSGHRIGMRLRNLLK 161
+ T PP+AK+QK A E D ++++G Q ++ I RL +++K
Sbjct: 159 DNTSTGPPAAKRQKGDDSQNSACEEQDILNNLGKQYSTTDQESPEINARLADIVK 213
>SB_12695| Best HMM Match : Linker_histone (HMM E-Value=1.6e-38)
Length = 184
Score = 29.5 bits (63), Expect = 7.6
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 91 VNTSPPRQSPK---KTPKILNKTPNKPPSAKKQKSPIK--VQKATERNDK 135
V P+++ K K PK K K P+AKK KSP K +KAT+ K
Sbjct: 91 VKAEKPKKAKKPAAKKPKAAKKPAAKKPAAKKAKSPKKSAPKKATKSPKK 140
>SB_58943| Best HMM Match : rve (HMM E-Value=6.1e-13)
Length = 1134
Score = 29.5 bits (63), Expect = 7.6
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 259 PTEIPMQLVVGTKVTARLR---RPQDG----LFTGCIDAVDTSNNTYRITFERPKLGTHS 311
PT+ + G A +R +PQD + G + + + NT +T+ER KL T S
Sbjct: 589 PTDPHSACLPGHPFLASIRTKEQPQDSCSYSIDDGLVSSASSILNTMAVTWERVKLETTS 648
Query: 312 VPDYEVLSN 320
PD + L++
Sbjct: 649 DPDLQTLTS 657
>SB_44588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 29.5 bits (63), Expect = 7.6
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 91 VNTSPPRQSPK---KTPKILNKTPNKPPSAKKQKSPIK--VQKATERNDK 135
V P+++ K K PK K K P+AKK KSP K +KAT+ K
Sbjct: 91 VKAEKPKKAKKPAAKKPKAAKKPAAKKPAAKKAKSPKKPAPKKATKSPKK 140
>SB_44186| Best HMM Match : HEAT (HMM E-Value=1.8e-05)
Length = 872
Score = 29.5 bits (63), Expect = 7.6
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 6/65 (9%)
Query: 58 PKPAPSEPVQKLNARGMPARIRKKNRFIFVDDFVNTSPPRQSPKKTPKI----LNKTPNK 113
P +P+ V + +P R+ K R + D NT P +SP KT +TP
Sbjct: 783 PHSSPAGVVTSPSVTAVPKRLLKSKRAMSEADLANT--PEKSPSKTSASPAPDTEQTPPH 840
Query: 114 PPSAK 118
PP K
Sbjct: 841 PPPPK 845
>SB_20227| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 361
Score = 29.5 bits (63), Expect = 7.6
Identities = 20/95 (21%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
Query: 70 NARGMPARIRKKNRFIFVDDFVNTSPPRQSPKKTPKILNKTPNKPPSAKKQKSPIKVQKA 129
N R P IR +N + TS P+ K +P + P +PP+ KK++ P++V +
Sbjct: 98 NNRVSPETIRDENHNNRALPKLITSDPKVKLKPSPPPV--AP-RPPNTKKKEQPVRVSTS 154
Query: 130 TERNDKVDSVGIQMQDNKSGHRIGMRLRNLLKLPK 164
+++ + I ++ + ++ P+
Sbjct: 155 ESPSEEDSGISIDVRARMELDSVNSESNEVIATPR 189
>SB_17975| Best HMM Match : Rho_N (HMM E-Value=0.0017)
Length = 1064
Score = 29.5 bits (63), Expect = 7.6
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 101 KKTPKILNKTPNKPPSAKKQKSPIKVQKATERNDKVDSVGIQM-QDNKSGHRIGMRLRNL 159
K+ P +N KP + ++K +E D ++V I+M + +K G+ ++ +N
Sbjct: 365 KQNPYTVNVLDTKPKCLNSFRCKQSLEKHSECCDNHEAVRIEMPKIDKDGNLPHIKFKNY 424
Query: 160 ---LKLPKAHKWVCFEYFYSNIDKVLFDGENDF 189
+++P + FE F NID DG F
Sbjct: 425 NRKMRVPFV-VYADFESFTENIDTCSPDGSKSF 456
>SB_17373| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 247
Score = 29.5 bits (63), Expect = 7.6
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 91 VNTSPPRQSPK---KTPKILNKTPNKPPSAKKQKSPIK--VQKATERNDK 135
V P+++ K K PK K K P+AKK KSP K +KAT+ K
Sbjct: 154 VKAEKPKKAKKPAAKKPKAAKKPAAKKPAAKKAKSPKKPAPKKATKSPKK 203
>SB_4587| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2656
Score = 29.5 bits (63), Expect = 7.6
Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 8/91 (8%)
Query: 56 LPPKPAPSEPVQKLNARGMPARIRKKNRFIFVDDFVNTSPPRQSPKKTPKILNKTPNK-- 113
+ P P+ PV++ P NR +T+P P++ K N +P++
Sbjct: 318 ISPVTTPTAPVEREEGSRSPDHALCSNRSPVSSPLAHTTPTSTVPREHLK--NASPSQIV 375
Query: 114 ----PPSAKKQKSPIKVQKATERNDKVDSVG 140
P AK+ SP+ +R+ V SVG
Sbjct: 376 ESGSSPHAKEPVSPVHDVPTEDRHSPVKSVG 406
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.319 0.134 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,395,825
Number of Sequences: 59808
Number of extensions: 762322
Number of successful extensions: 2633
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 2586
Number of HSP's gapped (non-prelim): 63
length of query: 570
length of database: 16,821,457
effective HSP length: 86
effective length of query: 484
effective length of database: 11,677,969
effective search space: 5652136996
effective search space used: 5652136996
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 63 (29.5 bits)
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