GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001154-TA|BGIBMGA001154-PA|IPR010561|DIRP
         (570 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-2|CAD27474.1|   92|Anopheles gambiae hypothetical prote...    25   4.1  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   9.5  

>AJ438610-2|CAD27474.1|   92|Anopheles gambiae hypothetical
          protein protein.
          Length = 92

 Score = 25.4 bits (53), Expect = 4.1
 Identities = 12/32 (37%), Positives = 15/32 (46%)

Query: 59 KPAPSEPVQKLNARGMPARIRKKNRFIFVDDF 90
          +P+P   VQKL     P  IRK  R +    F
Sbjct: 58 EPSPERKVQKLEPTEAPCYIRKDGRAVHPKPF 89


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.2 bits (50), Expect = 9.5
 Identities = 10/18 (55%), Positives = 13/18 (72%), Gaps = 2/18 (11%)

Query: 89  DFVNTSPPR--QSPKKTP 104
           DF+N  PPR  QSP ++P
Sbjct: 434 DFINKEPPRPGQSPTQSP 451


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.134    0.391 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 551,983
Number of Sequences: 2123
Number of extensions: 22872
Number of successful extensions: 58
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 57
Number of HSP's gapped (non-prelim): 2
length of query: 570
length of database: 516,269
effective HSP length: 68
effective length of query: 502
effective length of database: 371,905
effective search space: 186696310
effective search space used: 186696310
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 50 (24.2 bits)