Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001154-TA|BGIBMGA001154-PA|IPR010561|DIRP
(570 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z11115-14|CAC42391.1| 644|Caenorhabditis elegans Hypothetical p... 237 1e-62
Z11115-13|CAA77454.2| 642|Caenorhabditis elegans Hypothetical p... 237 1e-62
AF269694-1|AAF76193.1| 642|Caenorhabditis elegans LIN-9S protein. 237 1e-62
AF269693-1|AAF76192.1| 644|Caenorhabditis elegans LIN-9L protein. 237 1e-62
AF038618-3|AAB92073.1| 572|Caenorhabditis elegans Hypothetical ... 40 0.006
AF125972-1|AAD14770.2| 349|Caenorhabditis elegans Hypothetical ... 36 0.058
Z75532-2|CAA99812.1| 839|Caenorhabditis elegans Hypothetical pr... 33 0.41
U41038-5|AAK29710.4| 519|Caenorhabditis elegans Hypothetical pr... 33 0.54
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr... 31 1.7
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr... 31 1.7
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch... 31 1.7
M37235-1|AAA28122.1| 273|Caenorhabditis elegans myosin II protein. 31 1.7
AC025727-10|AAK66029.1| 707|Caenorhabditis elegans Hypothetical... 31 1.7
U97405-1|AAB53007.1| 327|Caenorhabditis elegans Hypothetical pr... 31 2.2
AF106582-7|ABD94096.1| 806|Caenorhabditis elegans Hypothetical ... 31 2.9
AF106582-6|ABD94095.1| 834|Caenorhabditis elegans Hypothetical ... 31 2.9
U67955-2|AAB07583.2| 791|Caenorhabditis elegans Hypothetical pr... 30 5.1
AF039720-5|AAB96696.1| 408|Caenorhabditis elegans Hypothetical ... 30 5.1
AC006608-10|AAF39754.1| 801|Caenorhabditis elegans Hypothetical... 30 5.1
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 29 6.7
Z98866-21|CAD56612.1| 743|Caenorhabditis elegans Hypothetical p... 29 6.7
Z98866-20|CAB11567.1| 734|Caenorhabditis elegans Hypothetical p... 29 6.7
Z82258-4|CAL44968.1| 1467|Caenorhabditis elegans Hypothetical pr... 29 6.7
Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical pr... 29 6.7
Z81527-3|CAB04271.1| 296|Caenorhabditis elegans Hypothetical pr... 29 6.7
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 29 6.7
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 29 6.7
Z48783-5|CAA88699.1| 1385|Caenorhabditis elegans Hypothetical pr... 29 6.7
U23528-6|AAK31385.1| 216|Caenorhabditis elegans Hypothetical pr... 29 6.7
AL023835-19|CAL44978.1| 1467|Caenorhabditis elegans Hypothetical... 29 6.7
AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical... 29 6.7
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 29 6.7
AF026209-14|AAB71280.1| 366|Caenorhabditis elegans Hypothetical... 29 6.7
Z22180-5|CAA80174.2| 717|Caenorhabditis elegans Hypothetical pr... 29 8.8
U55376-3|AAA98005.3| 525|Caenorhabditis elegans Nuclear hormone... 29 8.8
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 29 8.8
U00044-6|AAA50679.2| 670|Caenorhabditis elegans Bard homolog (t... 29 8.8
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 29 8.8
AF098989-2|AAK18954.3| 346|Caenorhabditis elegans Hypothetical ... 29 8.8
>Z11115-14|CAC42391.1| 644|Caenorhabditis elegans Hypothetical
protein ZK637.7b protein.
Length = 644
Score = 237 bits (581), Expect = 1e-62
Identities = 160/532 (30%), Positives = 265/532 (49%), Gaps = 39/532 (7%)
Query: 56 LPPKPAPSEPVQKLNARGMPARIRKKNRFIFVDDFVNTSPPRQSPKKTPKILNKTPNKPP 115
L P PAPS L A+ + +N +DD N P + + ++
Sbjct: 119 LSPPPAPSND---LLAKDLEMIEMHQNLVAGLDDLDN--PANMTNEAVEHRDTQSFFNMF 173
Query: 116 SAKKQKSPIKVQKATERNDKVDSVGIQMQDNKSGHRIGMRLRNLLKLPKAHKWVCFEYFY 175
S +++S + Q T +N + V M+ N +L NLL+ KA +WV E+FY
Sbjct: 174 STDQERSAMMKQFKTYKNQTSEDVSTFMRANIK------KLYNLLRYKKARQWVMCEFFY 227
Query: 176 SNIDKVLFDGENDFMICLKESFPQLTNRKLTRTQWSKIRRMMGKPRRCSQAFFDXXXXXX 235
S ID+ +F EN+F ++ESFP L N LTR +W IR+++GKPRRCS+ FF+
Sbjct: 228 SAIDEQIFKEENEFATIIRESFPNLKNWNLTRIEWRSIRKLLGKPRRCSKVFFEEERMYL 287
Query: 236 XXXXXXIRYVQQ---QKSADVCVKDLPTEIPMQLVVGTKVTARLRRPQDGLFTGCIDAVD 292
IR V + + +KDLP ++P +VVG +V AR+R P DG+++G IDAV
Sbjct: 288 EEKRMKIRSVYEGSYLNDPSIDLKDLPAKLPRPMVVGNRVFARIRNPYDGIYSGIIDAVI 347
Query: 293 TSNNTYRITFERPKLGTHSVPDYEVLSNEPPDTICLTSITQRFRPRKVIQDLLSLYSPIQ 352
+RI F++P + V D E+L + D + + ++ K+ + + ++
Sbjct: 348 PKG--FRIIFDKPDIPPTLVSDTEILLDGKLDLLSIAYFIEQAN-SKLPSGVRPFVAAVR 404
Query: 353 KNS----------------QGDPLIGCSD--LANQANSVIGSYPFRFLELIVKLRRLLNA 394
+S G PL+G +D L + ++G++P +FL +VKL +L++
Sbjct: 405 DSSHPHLVRDVLVSRKIERSGGPLMGPNDERLNGKNAEMVGNFPLKFLVNLVKLTKLIDI 464
Query: 395 KKSKINKLKEYNCMAEKRKSFGQRMPEDFERKYAAVVIELERMNMDLQEYINEIQHHCQQ 454
KK I +L E N AE + + + F+ KYA +I+LE +N ++ +N IQ H
Sbjct: 465 KKGLIRQLNELNADAEIQNMTSDKYSKAFQEKYAKTIIDLEHVNQNIDINMNGIQDHHMY 524
Query: 455 IAPGPCLAAMLAPSQLRDKCHEEASVLVEKNNNGV-IQDPSVLDLITDLTALMLQVRSLS 513
+ + + P +R C ++A VE N G+ +++ L LI LTA++LQVR++
Sbjct: 525 FSSNDISTSNMKPEAVRQMCSQQAGRFVEHCNQGLNVENVHALTLIQSLTAVLLQVRTMG 584
Query: 514 DSDQNAYELSVLQGTMDQIKMKLKPQYHRLFQNNVEIHM---HKIQMGLGQM 562
+A +L L + +I+ + P+ FQ+ VE+HM H I + G +
Sbjct: 585 TQKISAVDLQSLGDAISEIRTAIHPRNVAFFQDYVEVHMKQFHTIMLESGAL 636
>Z11115-13|CAA77454.2| 642|Caenorhabditis elegans Hypothetical
protein ZK637.7a protein.
Length = 642
Score = 237 bits (581), Expect = 1e-62
Identities = 160/532 (30%), Positives = 265/532 (49%), Gaps = 39/532 (7%)
Query: 56 LPPKPAPSEPVQKLNARGMPARIRKKNRFIFVDDFVNTSPPRQSPKKTPKILNKTPNKPP 115
L P PAPS L A+ + +N +DD N P + + ++
Sbjct: 117 LSPPPAPSND---LLAKDLEMIEMHQNLVAGLDDLDN--PANMTNEAVEHRDTQSFFNMF 171
Query: 116 SAKKQKSPIKVQKATERNDKVDSVGIQMQDNKSGHRIGMRLRNLLKLPKAHKWVCFEYFY 175
S +++S + Q T +N + V M+ N +L NLL+ KA +WV E+FY
Sbjct: 172 STDQERSAMMKQFKTYKNQTSEDVSTFMRANIK------KLYNLLRYKKARQWVMCEFFY 225
Query: 176 SNIDKVLFDGENDFMICLKESFPQLTNRKLTRTQWSKIRRMMGKPRRCSQAFFDXXXXXX 235
S ID+ +F EN+F ++ESFP L N LTR +W IR+++GKPRRCS+ FF+
Sbjct: 226 SAIDEQIFKEENEFATIIRESFPNLKNWNLTRIEWRSIRKLLGKPRRCSKVFFEEERMYL 285
Query: 236 XXXXXXIRYVQQ---QKSADVCVKDLPTEIPMQLVVGTKVTARLRRPQDGLFTGCIDAVD 292
IR V + + +KDLP ++P +VVG +V AR+R P DG+++G IDAV
Sbjct: 286 EEKRMKIRSVYEGSYLNDPSIDLKDLPAKLPRPMVVGNRVFARIRNPYDGIYSGIIDAVI 345
Query: 293 TSNNTYRITFERPKLGTHSVPDYEVLSNEPPDTICLTSITQRFRPRKVIQDLLSLYSPIQ 352
+RI F++P + V D E+L + D + + ++ K+ + + ++
Sbjct: 346 PKG--FRIIFDKPDIPPTLVSDTEILLDGKLDLLSIAYFIEQAN-SKLPSGVRPFVAAVR 402
Query: 353 KNS----------------QGDPLIGCSD--LANQANSVIGSYPFRFLELIVKLRRLLNA 394
+S G PL+G +D L + ++G++P +FL +VKL +L++
Sbjct: 403 DSSHPHLVRDVLVSRKIERSGGPLMGPNDERLNGKNAEMVGNFPLKFLVNLVKLTKLIDI 462
Query: 395 KKSKINKLKEYNCMAEKRKSFGQRMPEDFERKYAAVVIELERMNMDLQEYINEIQHHCQQ 454
KK I +L E N AE + + + F+ KYA +I+LE +N ++ +N IQ H
Sbjct: 463 KKGLIRQLNELNADAEIQNMTSDKYSKAFQEKYAKTIIDLEHVNQNIDINMNGIQDHHMY 522
Query: 455 IAPGPCLAAMLAPSQLRDKCHEEASVLVEKNNNGV-IQDPSVLDLITDLTALMLQVRSLS 513
+ + + P +R C ++A VE N G+ +++ L LI LTA++LQVR++
Sbjct: 523 FSSNDISTSNMKPEAVRQMCSQQAGRFVEHCNQGLNVENVHALTLIQSLTAVLLQVRTMG 582
Query: 514 DSDQNAYELSVLQGTMDQIKMKLKPQYHRLFQNNVEIHM---HKIQMGLGQM 562
+A +L L + +I+ + P+ FQ+ VE+HM H I + G +
Sbjct: 583 TQKISAVDLQSLGDAISEIRTAIHPRNVAFFQDYVEVHMKQFHTIMLESGAL 634
>AF269694-1|AAF76193.1| 642|Caenorhabditis elegans LIN-9S protein.
Length = 642
Score = 237 bits (581), Expect = 1e-62
Identities = 160/532 (30%), Positives = 265/532 (49%), Gaps = 39/532 (7%)
Query: 56 LPPKPAPSEPVQKLNARGMPARIRKKNRFIFVDDFVNTSPPRQSPKKTPKILNKTPNKPP 115
L P PAPS L A+ + +N +DD N P + + ++
Sbjct: 117 LSPPPAPSND---LLAKDLEMIEMHQNLVAGLDDLDN--PANMTNEAVEHRDTQSFFNMF 171
Query: 116 SAKKQKSPIKVQKATERNDKVDSVGIQMQDNKSGHRIGMRLRNLLKLPKAHKWVCFEYFY 175
S +++S + Q T +N + V M+ N +L NLL+ KA +WV E+FY
Sbjct: 172 STDQERSAMMKQFKTYKNQTSEDVSTFMRANIK------KLYNLLRYKKARQWVMCEFFY 225
Query: 176 SNIDKVLFDGENDFMICLKESFPQLTNRKLTRTQWSKIRRMMGKPRRCSQAFFDXXXXXX 235
S ID+ +F EN+F ++ESFP L N LTR +W IR+++GKPRRCS+ FF+
Sbjct: 226 SAIDEQIFKEENEFATIIRESFPNLKNWNLTRIEWRSIRKLLGKPRRCSKVFFEEERMYL 285
Query: 236 XXXXXXIRYVQQ---QKSADVCVKDLPTEIPMQLVVGTKVTARLRRPQDGLFTGCIDAVD 292
IR V + + +KDLP ++P +VVG +V AR+R P DG+++G IDAV
Sbjct: 286 EEKRMKIRSVYEGSYLNDPSIDLKDLPAKLPRPMVVGNRVFARIRNPYDGIYSGIIDAVI 345
Query: 293 TSNNTYRITFERPKLGTHSVPDYEVLSNEPPDTICLTSITQRFRPRKVIQDLLSLYSPIQ 352
+RI F++P + V D E+L + D + + ++ K+ + + ++
Sbjct: 346 PKG--FRIIFDKPDIPPTLVSDTEILLDGKLDLLSIAYFIEQAN-SKLPSGVRPFVAAVR 402
Query: 353 KNS----------------QGDPLIGCSD--LANQANSVIGSYPFRFLELIVKLRRLLNA 394
+S G PL+G +D L + ++G++P +FL +VKL +L++
Sbjct: 403 DSSHPHLVRDVLVSRKIERSGGPLMGPNDERLNGKNAEMVGNFPLKFLVNLVKLTKLIDI 462
Query: 395 KKSKINKLKEYNCMAEKRKSFGQRMPEDFERKYAAVVIELERMNMDLQEYINEIQHHCQQ 454
KK I +L E N AE + + + F+ KYA +I+LE +N ++ +N IQ H
Sbjct: 463 KKGLIRQLNELNADAEIQNMTSDKYSKAFQEKYAKTIIDLEHVNQNIDINMNGIQDHHMY 522
Query: 455 IAPGPCLAAMLAPSQLRDKCHEEASVLVEKNNNGV-IQDPSVLDLITDLTALMLQVRSLS 513
+ + + P +R C ++A VE N G+ +++ L LI LTA++LQVR++
Sbjct: 523 FSSNDISTSNMKPEAVRQMCSQQAGRFVEHCNQGLNVENVHALTLIQSLTAVLLQVRTMG 582
Query: 514 DSDQNAYELSVLQGTMDQIKMKLKPQYHRLFQNNVEIHM---HKIQMGLGQM 562
+A +L L + +I+ + P+ FQ+ VE+HM H I + G +
Sbjct: 583 TQKISAVDLQSLGDAISEIRTAIHPRNVAFFQDYVEVHMKQFHTIMLESGAL 634
>AF269693-1|AAF76192.1| 644|Caenorhabditis elegans LIN-9L protein.
Length = 644
Score = 237 bits (581), Expect = 1e-62
Identities = 160/532 (30%), Positives = 265/532 (49%), Gaps = 39/532 (7%)
Query: 56 LPPKPAPSEPVQKLNARGMPARIRKKNRFIFVDDFVNTSPPRQSPKKTPKILNKTPNKPP 115
L P PAPS L A+ + +N +DD N P + + ++
Sbjct: 119 LSPPPAPSND---LLAKDLEMIEMHQNLVAGLDDLDN--PANMTNEAVEHRDTQSFFNMF 173
Query: 116 SAKKQKSPIKVQKATERNDKVDSVGIQMQDNKSGHRIGMRLRNLLKLPKAHKWVCFEYFY 175
S +++S + Q T +N + V M+ N +L NLL+ KA +WV E+FY
Sbjct: 174 STDQERSAMMKQFKTYKNQTSEDVSTFMRANIK------KLYNLLRYKKARQWVMCEFFY 227
Query: 176 SNIDKVLFDGENDFMICLKESFPQLTNRKLTRTQWSKIRRMMGKPRRCSQAFFDXXXXXX 235
S ID+ +F EN+F ++ESFP L N LTR +W IR+++GKPRRCS+ FF+
Sbjct: 228 SAIDEQIFKEENEFATIIRESFPNLKNWNLTRIEWRSIRKLLGKPRRCSKVFFEEERMYL 287
Query: 236 XXXXXXIRYVQQ---QKSADVCVKDLPTEIPMQLVVGTKVTARLRRPQDGLFTGCIDAVD 292
IR V + + +KDLP ++P +VVG +V AR+R P DG+++G IDAV
Sbjct: 288 EEKRMKIRSVYEGSYLNDPSIDLKDLPAKLPRPMVVGNRVFARIRNPYDGIYSGIIDAVI 347
Query: 293 TSNNTYRITFERPKLGTHSVPDYEVLSNEPPDTICLTSITQRFRPRKVIQDLLSLYSPIQ 352
+RI F++P + V D E+L + D + + ++ K+ + + ++
Sbjct: 348 PKG--FRIIFDKPDIPPTLVSDTEILLDGKLDLLSIAYFIEQAN-SKLPSGVRPFVAAVR 404
Query: 353 KNS----------------QGDPLIGCSD--LANQANSVIGSYPFRFLELIVKLRRLLNA 394
+S G PL+G +D L + ++G++P +FL +VKL +L++
Sbjct: 405 DSSHPHLVRDVLVSRKIERSGGPLMGPNDERLNGKNAEMVGNFPLKFLVNLVKLTKLIDI 464
Query: 395 KKSKINKLKEYNCMAEKRKSFGQRMPEDFERKYAAVVIELERMNMDLQEYINEIQHHCQQ 454
KK I +L E N AE + + + F+ KYA +I+LE +N ++ +N IQ H
Sbjct: 465 KKGLIRQLNELNADAEIQNMTSDKYSKAFQEKYAKTIIDLEHVNQNIDINMNGIQDHHMY 524
Query: 455 IAPGPCLAAMLAPSQLRDKCHEEASVLVEKNNNGV-IQDPSVLDLITDLTALMLQVRSLS 513
+ + + P +R C ++A VE N G+ +++ L LI LTA++LQVR++
Sbjct: 525 FSSNDISTSNMKPEAVRQMCSQQAGRFVEHCNQGLNVENVHALTLIQSLTAVLLQVRTMG 584
Query: 514 DSDQNAYELSVLQGTMDQIKMKLKPQYHRLFQNNVEIHM---HKIQMGLGQM 562
+A +L L + +I+ + P+ FQ+ VE+HM H I + G +
Sbjct: 585 TQKISAVDLQSLGDAISEIRTAIHPRNVAFFQDYVEVHMKQFHTIMLESGAL 636
>AF038618-3|AAB92073.1| 572|Caenorhabditis elegans Hypothetical
protein F42G8.7 protein.
Length = 572
Score = 39.5 bits (88), Expect = 0.006
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 78 IRKKNRFIFVDDFVNTSPPRQSPKKTPKILNKTPNKPPSAKKQKSPIKVQKATERNDKVD 137
I N F FV D N + R+ +K +++ K + +KQ S KV+K TE+ +K +
Sbjct: 346 IHNLNIFQFVADLFNDNHHRKLHEKLNELIQKIVTETEEIEKQASEEKVEKPTEKLEKHE 405
Query: 138 SVG--IQMQDNKSG 149
SVG I + SG
Sbjct: 406 SVGWLIAQSEQTSG 419
>AF125972-1|AAD14770.2| 349|Caenorhabditis elegans Hypothetical
protein H25P19.1 protein.
Length = 349
Score = 36.3 bits (80), Expect = 0.058
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 53 GTKLPPKPAPSEPVQ-KLNARGMPARIRKKNRFIFVDDFVNTSPPRQSPKKTPKILNKTP 111
GT +P +P PS P + L R P+++ I + + +PP+ PK TP+ TP
Sbjct: 260 GTPMP-EPEPSRPPRINLKFRFTPSKLGTATPGISI--ISSPTPPKSPPKSTPRTSKSTP 316
Query: 112 NKPPSAKK 119
K P K+
Sbjct: 317 PKRPYLKR 324
>Z75532-2|CAA99812.1| 839|Caenorhabditis elegans Hypothetical
protein C54G10.2 protein.
Length = 839
Score = 33.5 bits (73), Expect = 0.41
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 58 PKPAPSEPVQKLNARGMPARIRK--KNRFIFVDDFVNTSPPRQSPKKTPKILNKTPNKP- 114
PK +PV+ + + +K + F+ DD +T P KKTP+ +TP K
Sbjct: 154 PKTPAKKPVEISPSTKENTKTKKVSDDEFVDSDDSFDTFTPITVKKKTPEKRKETPKKKE 213
Query: 115 -PSAKKQ---KSPIKVQKATERNDK 135
PS KK+ K I V+K E K
Sbjct: 214 LPSVKKEFPKKQSIPVKKEKETPQK 238
Score = 33.1 bits (72), Expect = 0.54
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 89 DFVNTSPPRQSPKKTPKILNKTPNKPPSAKKQKSPIKVQKATERNDKVDSV 139
DF SP S K PK+ KT KP + K+ P+++ +T+ N K V
Sbjct: 130 DFFKNSPA-PSASKLPKVAPKTVEKPKTPAKK--PVEISPSTKENTKTKKV 177
>U41038-5|AAK29710.4| 519|Caenorhabditis elegans Hypothetical
protein F59C12.3 protein.
Length = 519
Score = 33.1 bits (72), Expect = 0.54
Identities = 34/179 (18%), Positives = 79/179 (44%), Gaps = 10/179 (5%)
Query: 386 VKLRRLLNAKKSKINKLK--EYN-CMAEKRKSFGQRMPEDFERKYAAVVIELERMNMDLQ 442
V L++ L+A K ++KL+ EY+ EK + + E V+I+LE+ L
Sbjct: 142 VHLKKELDAFKRSLSKLQQIEYSYARLEKEYEYLANERKKQENLELNVIIQLEKSVKKLT 201
Query: 443 EYINEIQHHCQQIAPGPCLAAMLAPSQLRDK-----CHEEASVLVEKNNNGVIQDPSVLD 497
+++Q ++ + P + A L ++++ + C E + +E N + + + +
Sbjct: 202 IERDDLQMRLEKASTEPTMVANLMLNEIQQRQELFACKERQKMEIEAQNQTLEEQRNHIA 261
Query: 498 LITDLTALMLQVRSLSDSDQNAYELSVLQGTMDQIKMKLKPQYHRLFQNNVEIHMHKIQ 556
++ AL L+ ++ ELS + D+++ +L + + + + + Q
Sbjct: 262 MLE--KALANSQERLAKREKKCEELSAVVAHADELRKQLNEVWEEQHRRDQMVESERAQ 318
>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 31.5 bits (68), Expect = 1.7
Identities = 28/107 (26%), Positives = 54/107 (50%), Gaps = 7/107 (6%)
Query: 365 DLANQANSVIGSYPFRFLELIVKLRRLLNAKKSKINKLKEYNCMAEKRKSFGQRMPEDFE 424
D AN+AN R+L+ I +L++ ++ ++ + + +E+ AE++ + ++ E+
Sbjct: 1646 DHANKANEDAQKNIRRYLDQIRELQQTVDEEQKRREEFREHLLAAERKLAVAKQEQEELI 1705
Query: 425 RKYAAVVIELERMNMDLQEYINEIQHHCQQI-APGPCLAAMLAPSQL 470
K A LER ++ + E Q H ++ + LAA A SQL
Sbjct: 1706 VKLEA----LERARRVVESSVKEHQEHNNELNSQNVALAA--AKSQL 1746
>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 31.5 bits (68), Expect = 1.7
Identities = 28/107 (26%), Positives = 54/107 (50%), Gaps = 7/107 (6%)
Query: 365 DLANQANSVIGSYPFRFLELIVKLRRLLNAKKSKINKLKEYNCMAEKRKSFGQRMPEDFE 424
D AN+AN R+L+ I +L++ ++ ++ + + +E+ AE++ + ++ E+
Sbjct: 1646 DHANKANEDAQKNIRRYLDQIRELQQTVDEEQKRREEFREHLLAAERKLAVAKQEQEELI 1705
Query: 425 RKYAAVVIELERMNMDLQEYINEIQHHCQQI-APGPCLAAMLAPSQL 470
K A LER ++ + E Q H ++ + LAA A SQL
Sbjct: 1706 VKLEA----LERARRVVESSVKEHQEHNNELNSQNVALAA--AKSQL 1746
>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain 2
protein.
Length = 1947
Score = 31.5 bits (68), Expect = 1.7
Identities = 28/107 (26%), Positives = 54/107 (50%), Gaps = 7/107 (6%)
Query: 365 DLANQANSVIGSYPFRFLELIVKLRRLLNAKKSKINKLKEYNCMAEKRKSFGQRMPEDFE 424
D AN+AN R+L+ I +L++ ++ ++ + + +E+ AE++ + ++ E+
Sbjct: 1646 DHANKANEDAQKNIRRYLDQIRELQQTVDEEQKRREEFREHLLAAERKLAVAKQEQEELI 1705
Query: 425 RKYAAVVIELERMNMDLQEYINEIQHHCQQI-APGPCLAAMLAPSQL 470
K A LER ++ + E Q H ++ + LAA A SQL
Sbjct: 1706 VKLEA----LERARRVVESSVKEHQEHNNELNSQNVALAA--AKSQL 1746
>M37235-1|AAA28122.1| 273|Caenorhabditis elegans myosin II protein.
Length = 273
Score = 31.5 bits (68), Expect = 1.7
Identities = 28/107 (26%), Positives = 54/107 (50%), Gaps = 7/107 (6%)
Query: 365 DLANQANSVIGSYPFRFLELIVKLRRLLNAKKSKINKLKEYNCMAEKRKSFGQRMPEDFE 424
D AN+AN R+L+ I +L++ ++ ++ + + +E+ AE++ + ++ E+
Sbjct: 146 DHANKANEDAQKNIRRYLDQIRELQQTVDEEQKRREEFREHLLAAERKLAVAKQEQEELI 205
Query: 425 RKYAAVVIELERMNMDLQEYINEIQHHCQQI-APGPCLAAMLAPSQL 470
K A LER ++ + E Q H ++ + LAA A SQL
Sbjct: 206 VKLEA----LERARRVVESSVKEHQEHNNELNSQNVALAA--AKSQL 246
>AC025727-10|AAK66029.1| 707|Caenorhabditis elegans Hypothetical
protein Y73E7A.8 protein.
Length = 707
Score = 31.5 bits (68), Expect = 1.7
Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Query: 51 RVGTKLPPKPAPSEPVQKLNARGMPARIRKKNRFIFVDDFVNTSPPRQSPKKTPKILNKT 110
+V K+P P S+ +QKL+A K F +D + SP T L T
Sbjct: 309 KVAPKVPEAPEISDALQKLSASMDGPEFSNKG---FTEDIFGSIEELMSPPTTTTTLQTT 365
Query: 111 PNKPPSAKKQKSP 123
+P + K +P
Sbjct: 366 TTRPQTTKTTTTP 378
>U97405-1|AAB53007.1| 327|Caenorhabditis elegans Hypothetical
protein T09B4.5a protein.
Length = 327
Score = 31.1 bits (67), Expect = 2.2
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 54 TKLPPKPAPSEPVQKLNARGMPARIRKKNRFIFVDDFVNTSPPR-QSPKKTPKILNKTPN 112
TK+ P+P++ +K A PAR R N + S R ++ KTPK +KTP+
Sbjct: 26 TKMSKSPSPAKSARK--ASKSPARARTSNVKKTPSRSASKSATRGRTASKTPKTPSKTPS 83
Query: 113 KPPSAKKQKS 122
+ + +S
Sbjct: 84 SASARSRSRS 93
>AF106582-7|ABD94096.1| 806|Caenorhabditis elegans Hypothetical
protein W05F2.4b protein.
Length = 806
Score = 30.7 bits (66), Expect = 2.9
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 57 PPKPAPSEPVQKLNARGMPARIRKKNRFIFVDDFVNTSPPRQSPKKTPKILNKT 110
PP P PS P+ + + GM AR +N+ I ++ P Q P++ P N +
Sbjct: 572 PPPPPPSHPLPQNGSHGM-ARNTSQNQ-ISYHEYTPQPPTTQPPQRPPGSANSS 623
>AF106582-6|ABD94095.1| 834|Caenorhabditis elegans Hypothetical
protein W05F2.4a protein.
Length = 834
Score = 30.7 bits (66), Expect = 2.9
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 57 PPKPAPSEPVQKLNARGMPARIRKKNRFIFVDDFVNTSPPRQSPKKTPKILNKT 110
PP P PS P+ + + GM AR +N+ I ++ P Q P++ P N +
Sbjct: 600 PPPPPPSHPLPQNGSHGM-ARNTSQNQ-ISYHEYTPQPPTTQPPQRPPGSANSS 651
>U67955-2|AAB07583.2| 791|Caenorhabditis elegans Hypothetical
protein C16H3.3a protein.
Length = 791
Score = 29.9 bits (64), Expect = 5.1
Identities = 17/55 (30%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 93 TSPPRQSPKKTPKILNKTPNKPP-SAKKQKSPIKVQKATERNDKVDSVGIQMQDN 146
+S P ++PK TP+ N TP+K +A K+K+ +KA K++++G + +++
Sbjct: 112 SSKPIKTPKPTPEKKN-TPSKAKLAAMKKKADAARRKAQREAKKLEALGEKQEED 165
>AF039720-5|AAB96696.1| 408|Caenorhabditis elegans Hypothetical
protein F33D11.2 protein.
Length = 408
Score = 29.9 bits (64), Expect = 5.1
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 2/95 (2%)
Query: 54 TKLPPKPAPSEPVQKLNARGMPARIRKKNRFIFVDDFVNTSPPRQSPKKTPKILNKTPNK 113
T LPP PAP PV + NA+ R +K I +D + P + + K
Sbjct: 71 TPLPPSPAPVTPVLE-NAKPRTIRKQKSTAEIELDSKPAEPKIVKQPIPAANLKGQLGTK 129
Query: 114 -PPSAKKQKSPIKVQKATERNDKVDSVGIQMQDNK 147
A+K KS + V +A + + SV + ++ K
Sbjct: 130 REKKAEKVKSELVVPQAEAQKNTPKSVVARKKETK 164
>AC006608-10|AAF39754.1| 801|Caenorhabditis elegans Hypothetical
protein C15F1.2 protein.
Length = 801
Score = 29.9 bits (64), Expect = 5.1
Identities = 35/116 (30%), Positives = 52/116 (44%), Gaps = 9/116 (7%)
Query: 344 LLSLYSPIQKNSQGDPLIGCSDLANQA---NSVIGSYP-FRFLELIVKLRRLLNA--KKS 397
++ LY + K + D L C D N+ +SV +YP + E LRRLLN + S
Sbjct: 638 VIELYEYMIKRN--DKLRICLDNKNEKYFEDSVCLAYPEHKRHEYDDSLRRLLNTSFEYS 695
Query: 398 KINK-LKEYNCMAEKRKSFGQRMPEDFERKYAAVVIELERMNMDLQEYINEIQHHC 452
K + + N + EK P E + +E+ER + L INEI+ C
Sbjct: 696 KSRECFHDANLIQEKCTHLRDCCPNFDECREETFEVEVERTIISLTATINEIKQEC 751
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 29.5 bits (63), Expect = 6.7
Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 7/87 (8%)
Query: 54 TKLPPKPAPSE--PVQKLNARGMPARIRKKNRFIFVDDFVNTSPPRQSPKKTPKILNKTP 111
T+ PPKPAP + PVQ+ + P+ + V T +P +P + P
Sbjct: 396 TQAPPKPAPQQAPPVQQNPPKPTPSPAPPAQKAQPV-----TQQQASAPPTSPSAPVQAP 450
Query: 112 NKPPSAKKQKSPIKVQKATERNDKVDS 138
N P + PI Q + + S
Sbjct: 451 NTPTQKASSQDPIVQQDPPPKEPSISS 477
>Z98866-21|CAD56612.1| 743|Caenorhabditis elegans Hypothetical
protein Y49E10.23b protein.
Length = 743
Score = 29.5 bits (63), Expect = 6.7
Identities = 19/81 (23%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 369 QANSVIGSYPFRFLELIVKLRRLLNAKKSKINKLKEYNCMAEKRKSFGQRMPEDFERKYA 428
+ N + Y R E++ KLR ++ K S + +KE + RK+ Q +D E+
Sbjct: 152 EKNEAVVKYAMREGEMM-KLRDEISKKDSNMKVIKEE--LEAARKAQSQENLDDLEKTVQ 208
Query: 429 AVVIELERMNMDLQEYINEIQ 449
+ +E+E++ + ++ N ++
Sbjct: 209 NLKVEIEKLKHERFDFENRMK 229
>Z98866-20|CAB11567.1| 734|Caenorhabditis elegans Hypothetical
protein Y49E10.23a protein.
Length = 734
Score = 29.5 bits (63), Expect = 6.7
Identities = 19/81 (23%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 369 QANSVIGSYPFRFLELIVKLRRLLNAKKSKINKLKEYNCMAEKRKSFGQRMPEDFERKYA 428
+ N + Y R E++ KLR ++ K S + +KE + RK+ Q +D E+
Sbjct: 152 EKNEAVVKYAMREGEMM-KLRDEISKKDSNMKVIKEE--LEAARKAQSQENLDDLEKTVQ 208
Query: 429 AVVIELERMNMDLQEYINEIQ 449
+ +E+E++ + ++ N ++
Sbjct: 209 NLKVEIEKLKHERFDFENRMK 229
>Z82258-4|CAL44968.1| 1467|Caenorhabditis elegans Hypothetical
protein Y37A1B.17b protein.
Length = 1467
Score = 29.5 bits (63), Expect = 6.7
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 380 RFLELIVKLRRLLNAK--KSKINKLKEYNCMAEKRKSFGQRMPEDFERKYAAVVIELERM 437
R + IVK R + + K + +KL +Y K K G+R + ++ Y A+ ++++
Sbjct: 776 RIRDEIVKALRSIPKRLIKKRNDKLMDYEASRTKEKGLGKRDFAEIQKDYEALNTQVKQQ 835
Query: 438 NMDLQEYINEI 448
+ EY+ +
Sbjct: 836 LPKVTEYLTTV 846
>Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical
protein Y37A1B.17a protein.
Length = 1538
Score = 29.5 bits (63), Expect = 6.7
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 380 RFLELIVKLRRLLNAK--KSKINKLKEYNCMAEKRKSFGQRMPEDFERKYAAVVIELERM 437
R + IVK R + + K + +KL +Y K K G+R + ++ Y A+ ++++
Sbjct: 776 RIRDEIVKALRSIPKRLIKKRNDKLMDYEASRTKEKGLGKRDFAEIQKDYEALNTQVKQQ 835
Query: 438 NMDLQEYINEI 448
+ EY+ +
Sbjct: 836 LPKVTEYLTTV 846
>Z81527-3|CAB04271.1| 296|Caenorhabditis elegans Hypothetical
protein F35E12.3 protein.
Length = 296
Score = 29.5 bits (63), Expect = 6.7
Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Query: 244 YVQQQKSADVCVKDLPTEIPMQLVVGTK-VTARLRRPQDGLFTGCIDAVDTSNNTYRITF 302
+++Q K A+ C+K IPM+ + K V + +D T D +D SNN +
Sbjct: 192 HLEQWKKAERCIKCSELNIPMEFFLQFKRVKVDIEPGEDP--TVIRDVIDNSNNLESVLI 249
Query: 303 ERPKLGTHSVPDYEVLSNEPPDTICLTSITQRF 335
+ + + + + + N D++ LT + F
Sbjct: 250 QCCSMNINYINEVVSVFNLKEDSMYLTPNKKSF 282
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 29.5 bits (63), Expect = 6.7
Identities = 42/167 (25%), Positives = 69/167 (41%), Gaps = 17/167 (10%)
Query: 365 DLANQANSVIGSYPFRFLELIVKLRRLLNAKKSKIN--KLKEY-----NCMAEKRKSFGQ 417
DL N+A +I F E VKL + + K + +++E MAE ++ F +
Sbjct: 1237 DLGNEAE-LIPKLSREFEEWTVKLNEMNSTATEKDDSARMREQLNHANETMAELKRKFNE 1295
Query: 418 -RMPEDFERKYAAVVIELERMNMDLQEYINEIQHHCQQIAPGPCLAAMLAPSQLRDKCHE 476
+ P+ FE K V+ L + M L + C G L + A ++ D E
Sbjct: 1296 FKRPKGFEEKLEKVITTLSNVEMGLDDTTGIDGSEC-----GGALMEVRALVRMLDGAQE 1350
Query: 477 EASVLVEKNNNGVIQDPSVLDLITDLTALMLQVRSLSDSDQNAYELS 523
+ L E N +++D VLD T L +++ + YE S
Sbjct: 1351 KWKDLAE-NREQLVKD-RVLDEETSKETLQ-KLQYAKTKSKELYERS 1394
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 29.5 bits (63), Expect = 6.7
Identities = 42/167 (25%), Positives = 69/167 (41%), Gaps = 17/167 (10%)
Query: 365 DLANQANSVIGSYPFRFLELIVKLRRLLNAKKSKIN--KLKEY-----NCMAEKRKSFGQ 417
DL N+A +I F E VKL + + K + +++E MAE ++ F +
Sbjct: 1237 DLGNEAE-LIPKLSREFEEWTVKLNEMNSTATEKDDSARMREQLNHANETMAELKRKFNE 1295
Query: 418 -RMPEDFERKYAAVVIELERMNMDLQEYINEIQHHCQQIAPGPCLAAMLAPSQLRDKCHE 476
+ P+ FE K V+ L + M L + C G L + A ++ D E
Sbjct: 1296 FKRPKGFEEKLEKVITTLSNVEMGLDDTTGIDGSEC-----GGALMEVRALVRMLDGAQE 1350
Query: 477 EASVLVEKNNNGVIQDPSVLDLITDLTALMLQVRSLSDSDQNAYELS 523
+ L E N +++D VLD T L +++ + YE S
Sbjct: 1351 KWKDLAE-NREQLVKD-RVLDEETSKETLQ-KLQYAKTKSKELYERS 1394
>Z48783-5|CAA88699.1| 1385|Caenorhabditis elegans Hypothetical
protein F33H1.4 protein.
Length = 1385
Score = 29.5 bits (63), Expect = 6.7
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Query: 58 PKPAPSEPVQKLNARGMPARIRKKNRFIFVDDFVNTSPP---RQSPKKTPKILNKTPNKP 114
P PAP+ K N+RG PA +R D V P R S ++ P + + +
Sbjct: 253 PPPAPAHLANKANSRGRPANPIPPHRRPVPKDLVPPGFPSLKRASSQRDPTPIKRKDTRE 312
Query: 115 PSAKKQKS 122
+ K Q+S
Sbjct: 313 VAEKVQES 320
>U23528-6|AAK31385.1| 216|Caenorhabditis elegans Hypothetical
protein B0034.4 protein.
Length = 216
Score = 29.5 bits (63), Expect = 6.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 103 TPKILNKTPNKPPSAKKQKSPIKVQKATERN 133
+PKI N T P+ KK+K + K TER+
Sbjct: 68 SPKISNSTVPTAPTPKKEKKVVATTKKTERS 98
>AL023835-19|CAL44978.1| 1467|Caenorhabditis elegans Hypothetical
protein Y37A1B.17b protein.
Length = 1467
Score = 29.5 bits (63), Expect = 6.7
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 380 RFLELIVKLRRLLNAK--KSKINKLKEYNCMAEKRKSFGQRMPEDFERKYAAVVIELERM 437
R + IVK R + + K + +KL +Y K K G+R + ++ Y A+ ++++
Sbjct: 776 RIRDEIVKALRSIPKRLIKKRNDKLMDYEASRTKEKGLGKRDFAEIQKDYEALNTQVKQQ 835
Query: 438 NMDLQEYINEI 448
+ EY+ +
Sbjct: 836 LPKVTEYLTTV 846
>AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical
protein Y37A1B.17a protein.
Length = 1538
Score = 29.5 bits (63), Expect = 6.7
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 380 RFLELIVKLRRLLNAK--KSKINKLKEYNCMAEKRKSFGQRMPEDFERKYAAVVIELERM 437
R + IVK R + + K + +KL +Y K K G+R + ++ Y A+ ++++
Sbjct: 776 RIRDEIVKALRSIPKRLIKKRNDKLMDYEASRTKEKGLGKRDFAEIQKDYEALNTQVKQQ 835
Query: 438 NMDLQEYINEI 448
+ EY+ +
Sbjct: 836 LPKVTEYLTTV 846
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 29.5 bits (63), Expect = 6.7
Identities = 42/167 (25%), Positives = 69/167 (41%), Gaps = 17/167 (10%)
Query: 365 DLANQANSVIGSYPFRFLELIVKLRRLLNAKKSKIN--KLKEY-----NCMAEKRKSFGQ 417
DL N+A +I F E VKL + + K + +++E MAE ++ F +
Sbjct: 1237 DLGNEAE-LIPKLSREFEEWTVKLNEMNSTATEKDDSARMREQLNHANETMAELKRKFNE 1295
Query: 418 -RMPEDFERKYAAVVIELERMNMDLQEYINEIQHHCQQIAPGPCLAAMLAPSQLRDKCHE 476
+ P+ FE K V+ L + M L + C G L + A ++ D E
Sbjct: 1296 FKRPKGFEEKLEKVITTLSNVEMGLDDTTGIDGSEC-----GGALMEVRALVRMLDGAQE 1350
Query: 477 EASVLVEKNNNGVIQDPSVLDLITDLTALMLQVRSLSDSDQNAYELS 523
+ L E N +++D VLD T L +++ + YE S
Sbjct: 1351 KWKDLAE-NREQLVKD-RVLDEETSKETLQ-KLQYAKTKSKELYERS 1394
>AF026209-14|AAB71280.1| 366|Caenorhabditis elegans Hypothetical
protein C05E4.12 protein.
Length = 366
Score = 29.5 bits (63), Expect = 6.7
Identities = 10/35 (28%), Positives = 21/35 (60%)
Query: 403 KEYNCMAEKRKSFGQRMPEDFERKYAAVVIELERM 437
K++NC AE +FG +D++ K ++ + +R+
Sbjct: 92 KDFNCKAENTINFGSERRKDYDCKSCSIFLNCQRV 126
>Z22180-5|CAA80174.2| 717|Caenorhabditis elegans Hypothetical
protein K11H3.4 protein.
Length = 717
Score = 29.1 bits (62), Expect = 8.8
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 55 KLPPKPAPSEPVQKLNARGMPARIRKKNRFIFVDDFVNTSPPRQSPKKTPKILNKTPNKP 114
KLP K P + ++ +AR +N + + D +TS + P + +K +P
Sbjct: 492 KLPRKVNPRD-LEPTDARNRNGNYENRNEYGYNCDRQSTSAVDSRNQSVPPVFSKLLQEP 550
Query: 115 PSAKKQ 120
P KK+
Sbjct: 551 PPPKKR 556
>U55376-3|AAA98005.3| 525|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 45 protein.
Length = 525
Score = 29.1 bits (62), Expect = 8.8
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 151 RIGMRLRNLLKLPKAHKWVCFEYFYSNIDKVLFDGENDFMICLKESFPQLTNRKLT 206
R M +R +LPK KW+ F++F++ ++ + F C + + R LT
Sbjct: 320 RFCMSIRVFAQLPKDQKWIIFKHFWTR----FYELDRCFATCQRLGYNLTDERGLT 371
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 29.1 bits (62), Expect = 8.8
Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Query: 349 SPIQKNSQGDPLIGCSDL-ANQANSVIGSYPFRFLELIVKLRRLLNAKKSKINKLKEYNC 407
+P+ S+ P ++ A+ N+ + L IV+LR + N S K Y+
Sbjct: 616 TPVNSTSEESPKTNETEKNASSGNATEVKEKKKELPSIVRLR-ITNKYPSAFVPNK-YDV 673
Query: 408 MAEKRKSFGQRMPEDFERKYAAVVIELERMNMDLQEYINEIQ 449
EKR+ E + AAV ELE N + +Y+ E +
Sbjct: 674 QEEKRRMEAFAEKERLASERAAVENELESFNFECSQYLEETE 715
>U00044-6|AAA50679.2| 670|Caenorhabditis elegans Bard homolog
(tumor suppressorgene bard1) protein 1 protein.
Length = 670
Score = 29.1 bits (62), Expect = 8.8
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 99 SPKKTPKILNKTPNKPPS-AKKQKSPIKVQKATERNDKVDSVGIQMQDNKSGHR 151
S KK PK+ + P + PS ++ +K+ IK K R+ S G + KS R
Sbjct: 254 SAKKQPKLEPEEPEEVPSTSRSRKNSIKSDKIERRSQSPMSFGEKSMSVKSEQR 307
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 29.1 bits (62), Expect = 8.8
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 55 KLPP-KPAPSEPVQKLNARGMPARIRKKNRFIFVDDFVNTSPPRQSPKKTPKILN 108
++PP K + SE ++ N G +KKN V DF+ +P + K P +N
Sbjct: 785 RIPPLKLSDSEKLRLDNIPGDKTETQKKNHTKLVADFIRNAPNNRILNKPPPRVN 839
>AF098989-2|AAK18954.3| 346|Caenorhabditis elegans Hypothetical
protein F47G6.3 protein.
Length = 346
Score = 29.1 bits (62), Expect = 8.8
Identities = 22/94 (23%), Positives = 36/94 (38%), Gaps = 11/94 (11%)
Query: 58 PKPAPSEPVQ---------KLNARGMPARIRKKNRFIFVDDFVNTSPPRQSPKKTPKILN 108
P+P P VQ + + G ++K R VD+ T+ SP P
Sbjct: 27 PRPKPKSKVQTAERIPSSKRRSKSGKKRGTKEKERSKEVDELPKTAGSVMSPAPNPPKFK 86
Query: 109 KTPNKPPSAKKQKSPIKVQKAT--ERNDKVDSVG 140
P+ P + +P+ K + ++ K D VG
Sbjct: 87 PPPSTPAKTNQTSTPVPTSKDSTGSKSKKSDEVG 120
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.319 0.134 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,759,135
Number of Sequences: 27539
Number of extensions: 592896
Number of successful extensions: 2252
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 2206
Number of HSP's gapped (non-prelim): 58
length of query: 570
length of database: 12,573,161
effective HSP length: 85
effective length of query: 485
effective length of database: 10,232,346
effective search space: 4962687810
effective search space used: 4962687810
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 62 (29.1 bits)
- SilkBase 1999-2023 -