Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001152-TA|BGIBMGA001152-PA|IPR013057|Amino acid
transporter, transmembrane, IPR008333|Oxidoreductase FAD-binding
region, IPR001433|Oxidoreductase FAD/NAD(P)-binding,
IPR001834|NADH:cytochrome b5 reductase (CBR), IPR001709|Flavoprotein
pyridine nucleotide cytochrome reductase
(512 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC970.03 |||cytochrome b5 reductase |Schizosaccharomyces pombe... 162 9e-41
SPAC17H9.12c |||NADH-cytochrome reductase|Schizosaccharomyces po... 39 0.002
SPBC1685.07c |||amino acid transporter |Schizosaccharomyces pomb... 31 0.29
SPCC1795.08c |||histone acetyltransferase complex subunit |Schiz... 28 2.7
SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated protei... 28 3.6
SPAC869.02c |||nitric oxide dioxygenase |Schizosaccharomyces pom... 28 3.6
SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||... 28 3.6
SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic... 27 8.2
SPAC1296.06 |||NADPH cytochrome reductase|Schizosaccharomyces po... 27 8.2
SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces p... 27 8.2
SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit Bgs3|Schizo... 27 8.2
>SPCC970.03 |||cytochrome b5 reductase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 301
Score = 162 bits (394), Expect = 9e-41
Identities = 90/224 (40%), Positives = 132/224 (58%), Gaps = 29/224 (12%)
Query: 283 GLPIGQHIHLSAKINDDLVIRAYTPVSSDEDKGYVDLVIKVYFKNVHPKFPEGGKLSQYL 342
GLPIGQH+ + ++ R+YTP+SSD DKGY DL++K Y GK+S+
Sbjct: 91 GLPIGQHLKVFVDVDGKEYSRSYTPLSSDADKGYFDLLVKSY---------PNGKVSKKF 141
Query: 343 NNMKINDTIDVRGPSGRLQY-TGNGTFLIKKLRKDPPTKVVVKKLNLIAGGTGIAPMLQL 401
+ +KI DTI VRGP G ++ TG + + +IAGGTGI PMLQ+
Sbjct: 142 SELKIGDTIGVRGPKGNWKHRTG-----------------LARHFGMIAGGTGITPMLQI 184
Query: 402 VRHICTDVNDRTELKLLFANQSEDDILLRDELERYQREHPSQFQVWYTIDRPTDGWKYSS 461
+R + ++ D TE+ LL+AN SE DI+LRDE++ ++ P +F V Y ++ P + WK S
Sbjct: 185 IRAVLSNFEDPTEITLLYANVSEGDIVLRDEIDALAKKDP-RFTVHYVLNNPPENWKGSV 243
Query: 462 GFINDEMIRDHLFPPSNDVLVLMCGPPPMINFACNPALDKLGFK 505
GF+ E+I+ H PS + VL+CGP PM+N + A LG++
Sbjct: 244 GFVTQELIKAHFPAPSPETKVLICGPTPMVN-SLREATVALGYE 286
>SPAC17H9.12c |||NADH-cytochrome reductase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 266
Score = 38.7 bits (86), Expect = 0.002
Identities = 44/167 (26%), Positives = 77/167 (46%), Gaps = 34/167 (20%)
Query: 334 EGGKLSQYLNNMKINDTIDVRGPSGRLQYTGNGTFLIKKLRKDPPTKVVVKKLNLIAGGT 393
E G +S Y+++ K DTI++RGP F KL ++V I GT
Sbjct: 111 EEGPVSSYIHSKKEGDTIELRGP-----------FKTTKLDCTKYPRIVA-----IVAGT 154
Query: 394 GIAPMLQLVRHICTDVNDRTELKLLFANQSEDDILLRDELERYQREHPSQFQVWYTIDRP 453
GIAP+ QL + + + V+ +++ ++ LL++ELE+ E P+ +V +R
Sbjct: 155 GIAPIYQLAQSVKSPVD------IVYCSRPGQPPLLKEELEK---ECPN-VRVKSVQNRL 204
Query: 454 TDGWKYSSGFINDEMIRDHLFPPSNDVLVLMCGPPPMINFACNPALD 500
+ I+D + D++ P D L ++CG ++ P D
Sbjct: 205 VN--------IHDILDWDNVTVPLKDTLCIVCGSQKFVSTIAGPKAD 243
>SPBC1685.07c |||amino acid transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 420
Score = 31.5 bits (68), Expect = 0.29
Identities = 23/91 (25%), Positives = 39/91 (42%), Gaps = 9/91 (9%)
Query: 133 LKYLAPFSGFANILLVLTFLICLYYICNEFPDLDS-RPTSVNIGNLPLFIGLSGGTELTM 191
++Y P SGF + ++ F+ N F ++ R S N +F + T
Sbjct: 194 IRYFVPESGFGYLSVLPVFVFGFTCHQNAFSVINEVRNFSQGFVNFTMFTAIISST---- 249
Query: 192 SVVVLLYMIMGFLGYVKYGDQAMGSITLNLD 222
LLY+++ GY+ +G A G+I D
Sbjct: 250 ----LLYLLVAITGYLSFGSLASGNIIAMYD 276
>SPCC1795.08c |||histone acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 985
Score = 28.3 bits (60), Expect = 2.7
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 459 YSSGFINDEMIRDHLFPPSNDVL-VLMCGPPPMINFACNPALDKLGFKPDQRFAY 512
Y++ F +D + + N VL V M GPP N C +K P RFAY
Sbjct: 580 YNAVFSDDIFVTTNSEQIQNCVLNVPMYGPPTENNEYCEEISEKYPITPVSRFAY 634
>SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1462
Score = 27.9 bits (59), Expect = 3.6
Identities = 16/81 (19%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Query: 296 INDDLVIRAYTPVSSDEDKGYVDLVIKVYFKNVHPKFPEGGKLSQYLNNMKINDTIDVRG 355
+N D + P+S+ + D + FK ++ + G +L+ Y+N + D I+V+
Sbjct: 974 LNKDTLDHVSGPISNSVSSSFKDFT-RTPFKEINGERETGFELTSYVNALSKKDDINVQK 1032
Query: 356 PSGRLQYTGNGTFLIKKLRKD 376
+ G + + +D
Sbjct: 1033 TENVDESVGLNAMFMDNVNQD 1053
>SPAC869.02c |||nitric oxide dioxygenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 27.9 bits (59), Expect = 3.6
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 14/75 (18%)
Query: 335 GGKLSQYLN-NMKINDTIDVRGPSGRLQYTGNGTFLIKKLRKDPPTKVVVKKLNLIAGGT 393
GG +S +++ N+K+ D + V P+ G F+ K+ ++ V + L AGG
Sbjct: 256 GGVVSNFVHDNLKVGDIVGVSPPA--------GNFVYKRSEEN-----VNRPLLCFAGGI 302
Query: 394 GIAPMLQLVRHICTD 408
GI P++ ++ D
Sbjct: 303 GITPLIPIIETALLD 317
>SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1367
Score = 27.9 bits (59), Expect = 3.6
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 10/85 (11%)
Query: 89 VYVILLVESVQQIVDYFYADNGINETMYCLMFLVPILIFTQIENLKYLAPFSGFAN-ILL 147
+YV + E + + ++ N I T Y + +P ++ Q +N+ AN L
Sbjct: 111 IYVTSIPEEHRHLPSQWFPSNKIRTTKYTPVSFIPKNLWNQFKNI---------ANAFFL 161
Query: 148 VLTFLICLYYICNEFPDLDSRPTSV 172
+T L C+ C E L P SV
Sbjct: 162 FVTLLQCIPLFCPEHLGLSFIPLSV 186
>SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic
subunit Bgs1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1729
Score = 26.6 bits (56), Expect = 8.2
Identities = 16/80 (20%), Positives = 34/80 (42%)
Query: 73 IFIDWAMAFTILGACAVYVILLVESVQQIVDYFYADNGINETMYCLMFLVPILIFTQIEN 132
IFI + +AF L C + + V ++ ++ + I E C ++ ++
Sbjct: 1240 IFIVFGIAFVPLAVCELGERGAIRMVIRLAKQIFSLSPIFEIFTCQIYAQSLIANLTFGG 1299
Query: 133 LKYLAPFSGFANILLVLTFL 152
+Y+ GFA + + + L
Sbjct: 1300 ARYIGTSRGFATVRVPFSLL 1319
>SPAC1296.06 |||NADPH cytochrome reductase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 558
Score = 26.6 bits (56), Expect = 8.2
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 384 KKLNLIAGGTGIAPMLQLVRHICTDVNDRTELKLLFANQSED-DILLRDELERYQRE 439
K L ++ GTG+AP+ L++ N E L F +++ D L + E+Y E
Sbjct: 413 KPLIMVGPGTGVAPLRALIQE--RIYNGLKENLLFFGCRNKSMDFLFEKDWEKYTEE 467
>SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 521
Score = 26.6 bits (56), Expect = 8.2
Identities = 9/18 (50%), Positives = 14/18 (77%)
Query: 338 LSQYLNNMKINDTIDVRG 355
LS+Y+NN+K+ND + G
Sbjct: 68 LSRYVNNIKLNDRFEAEG 85
>SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit
Bgs3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1826
Score = 26.6 bits (56), Expect = 8.2
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 151 FLICLYYICNEFPDLDSRPTSVNIGNLPLFIGLSGGTELTMSVVVLLYMIMGFLG 205
F IC Y N P L+ + +VN G + ++I + ++ + +++L M LG
Sbjct: 1544 FTICAYTFMNSQPGLEDKSRAVN-GFIRIWIMAALPIAISTAALLILLMFSCMLG 1597
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.325 0.142 0.430
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,353,813
Number of Sequences: 5004
Number of extensions: 101676
Number of successful extensions: 325
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 315
Number of HSP's gapped (non-prelim): 14
length of query: 512
length of database: 2,362,478
effective HSP length: 76
effective length of query: 436
effective length of database: 1,982,174
effective search space: 864227864
effective search space used: 864227864
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 56 (26.6 bits)
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