Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001152-TA|BGIBMGA001152-PA|IPR013057|Amino acid
transporter, transmembrane, IPR008333|Oxidoreductase FAD-binding
region, IPR001433|Oxidoreductase FAD/NAD(P)-binding,
IPR001834|NADH:cytochrome b5 reductase (CBR), IPR001709|Flavoprotein
pyridine nucleotide cytochrome reductase
(512 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g77760.1 68414.m09053 nitrate reductase 1 (NR1) identical to ... 235 5e-62
At1g37130.1 68414.m04639 nitrate reductase 2 (NR2) identical to ... 227 1e-59
At5g17770.1 68418.m02084 NADH-cytochrome b5 reductase identical ... 163 3e-40
At5g20080.1 68418.m02391 NADH-cytochrome b5 reductase, putative ... 142 5e-34
At3g11900.1 68416.m01459 amino acid transporter family protein l... 56 6e-08
At5g65990.1 68418.m08308 amino acid transporter family protein s... 49 6e-06
At1g30510.3 68414.m03730 ferredoxin--NADP(+) reductase, putative... 44 2e-04
At1g30510.2 68414.m03732 ferredoxin--NADP(+) reductase, putative... 44 2e-04
At1g30510.1 68414.m03731 ferredoxin--NADP(+) reductase, putative... 44 2e-04
At4g05390.1 68417.m00821 ferredoxin--NADP(+) reductase, putative... 42 0.001
At2g39130.1 68415.m04807 amino acid transporter family protein b... 38 0.016
At4g38250.1 68417.m05402 amino acid transporter family protein l... 36 0.064
At2g42005.1 68415.m05196 amino acid transporter family protein l... 35 0.11
At1g15140.1 68414.m01808 oxidoreductase NAD-binding domain-conta... 34 0.20
At5g09220.1 68418.m01045 amino acid permease 2 (AAP2) identical ... 33 0.34
At2g42480.1 68415.m05255 meprin and TRAF homology domain-contain... 33 0.34
At5g63850.1 68418.m08015 amino acid transporter 4, putative (AAP... 33 0.60
At3g28960.1 68416.m03620 amino acid transporter family protein l... 31 1.4
At1g15140.3 68414.m01810 oxidoreductase NAD-binding domain-conta... 31 1.4
At1g15140.2 68414.m01809 oxidoreductase NAD-binding domain-conta... 31 1.4
At5g43040.1 68418.m05254 DC1 domain-containing protein contains ... 31 1.8
At3g56200.1 68416.m06246 amino acid transporter family protein l... 31 1.8
At1g77380.1 68414.m09011 amino acid carrier, putative / amino ac... 31 1.8
At1g44100.1 68414.m05094 amino acid permease 5, putative (AAP5) ... 31 1.8
At1g20020.1 68414.m02507 ferredoxin--NADP(+) reductase, putative... 31 1.8
At5g15240.1 68418.m01785 amino acid transporter family protein l... 30 3.2
At5g64500.1 68418.m08103 membrane protein-related contains weak ... 30 4.2
At3g21520.1 68416.m02715 expressed protein contains Pfam profile... 30 4.2
At3g14770.1 68416.m01867 nodulin MtN3 family protein similar to ... 30 4.2
At4g02680.1 68417.m00363 tetratricopeptide repeat (TPR)-containi... 29 5.6
At3g54830.1 68416.m06074 amino acid transporter family protein b... 29 5.6
At2g41190.1 68415.m05087 amino acid transporter family protein l... 29 5.6
At3g09330.1 68416.m01107 amino acid transporter family protein b... 29 7.4
At4g35180.1 68417.m05001 amino acid transporter family protein s... 29 9.7
>At1g77760.1 68414.m09053 nitrate reductase 1 (NR1) identical to
SP|P11832 Nitrate reductase 1 (formerly EC 1.6.6.1)
(NR1){Arabidopsis thaliana}
Length = 917
Score = 235 bits (575), Expect = 5e-62
Identities = 102/224 (45%), Positives = 157/224 (70%), Gaps = 9/224 (4%)
Query: 283 GLPIGQHIHLSAKINDDLVIRAYTPVSSDEDKGYVDLVIKVYFKNVHPKFPEGGKLSQYL 342
GLP+G+H+ + A IND L +RAYTP S+ + G++DLV+KVYFK+VHP+FP GG +SQ+L
Sbjct: 692 GLPVGKHVFVCANINDKLCLRAYTPTSAIDAVGHIDLVVKVYFKDVHPRFPNGGLMSQHL 751
Query: 343 NNMKINDTIDVRGPSGRLQYTGNGTFLIKKLRKDPPTKVVVKKLNLIAGGTGIAPMLQLV 402
+++ I ID++GP G ++Y G G FL+ K KKL ++AGGTGI P+ Q++
Sbjct: 752 DSLPIGSMIDIKGPLGHIEYKGKGNFLVSGKPK------FAKKLAMLAGGTGITPIYQII 805
Query: 403 RHICTDVNDRTELKLLFANQSEDDILLRDELERYQREHPSQFQVWYTIDRPTDGWKYSSG 462
+ I +D D TE+ +++AN++EDDIL+R+ELE + +H + ++WY ++ +GW YS+G
Sbjct: 806 QSILSDPEDETEMYVVYANRTEDDILVREELEGWASKHKERLKIWYVVEIAKEGWSYSTG 865
Query: 463 FINDEMIRDHLFPP--SNDVLVLMCGPPPMINFACNPALDKLGF 504
FI + ++R+H+ P + L L CGPPPMI FA P L+K+G+
Sbjct: 866 FITEAVLREHI-PEGLEGESLALACGPPPMIQFALQPNLEKMGY 908
>At1g37130.1 68414.m04639 nitrate reductase 2 (NR2) identical to
SP|P11035 Nitrate reductase 2 (formerly EC 1.6.6.1)
(NR2) {Arabidopsis thaliana}
Length = 917
Score = 227 bits (556), Expect = 1e-59
Identities = 106/264 (40%), Positives = 170/264 (64%), Gaps = 14/264 (5%)
Query: 249 VPMEIVWRNTKDHVAQKYHNITEAVMRAVFAALTGLPIGQHIHLSAKINDDLVIRAYTPV 308
VP+++V + + H +K+ V + GLP+G+HI L A IND L +RAYTP
Sbjct: 663 VPVQLVEKTSISHDVRKFR-----FALPVEDMVLGLPVGKHIFLCATINDKLCLRAYTPS 717
Query: 309 SSDEDKGYVDLVIKVYFKNVHPKFPEGGKLSQYLNNMKINDTIDVRGPSGRLQYTGNGTF 368
S+ + GY +LV+K+YF VHP+FP GG +SQYL+++ I T++++GP G ++Y G G+F
Sbjct: 718 STVDVVGYFELVVKIYFGGVHPRFPNGGLMSQYLDSLPIGSTLEIKGPLGHVEYLGKGSF 777
Query: 369 LIKKLRKDPPTKVVVKKLNLIAGGTGIAPMLQLVRHICTDVNDRTELKLLFANQSEDDIL 428
+ K KL ++AGGTGI P+ Q+++ I D D TE+ +++AN++E+DIL
Sbjct: 778 TVHGKPK------FADKLAMLAGGTGITPVYQIIQAILKDPEDETEMYVIYANRTEEDIL 831
Query: 429 LRDELERYQREHPSQFQVWYTIDRPTDGWKYSSGFINDEMIRDHLFPPSND--VLVLMCG 486
LR+EL+ + ++P + +VWY ++ +GW YS+GFI++ ++R+H+ P D L + CG
Sbjct: 832 LREELDGWAEQYPDRLKVWYVVESAKEGWAYSTGFISEAIMREHI-PDGLDGSALAMACG 890
Query: 487 PPPMINFACNPALDKLGFKPDQRF 510
PPPMI FA P L+K+ + + F
Sbjct: 891 PPPMIQFAVQPNLEKMQYNIKEDF 914
>At5g17770.1 68418.m02084 NADH-cytochrome b5 reductase identical to
NADH-cytochrome b5 reductase [Arabidopsis thaliana]
GI:4240116
Length = 281
Score = 163 bits (395), Expect = 3e-40
Identities = 93/262 (35%), Positives = 147/262 (56%), Gaps = 32/262 (12%)
Query: 257 NTKDHVAQKYHNITEAVMRAVF-----AALTGLPIGQHIHLSAKIND-DLVIRAYTPVSS 310
N K+ K H ++ V + VF ++ GLPIGQHI K + VI+ YTP +
Sbjct: 46 NFKEFKLVKRHQLSHNVAKFVFELPTSTSVLGLPIGQHISCRGKDGQGEDVIKPYTPTTL 105
Query: 311 DEDKGYVDLVIKVYFKNVHPKFPEGGKLSQYLNNMKINDTIDVRGPSGRLQYTGNGTFLI 370
D D G +LVIK+Y P+G ++S + M++ D + V+GP GR +Y G F
Sbjct: 106 DSDVGRFELVIKMY--------PQG-RMSHHFREMRVGDHLAVKGPKGRFKYQP-GQF-- 153
Query: 371 KKLRKDPPTKVVVKKLNLIAGGTGIAPMLQLVRHICTDVNDRTELKLLFANQSEDDILLR 430
+ ++AGG+GI PM Q+ R I + D+T++ L++AN + DDILL+
Sbjct: 154 -------------RAFGMLAGGSGITPMFQVARAILENPTDKTKVHLIYANVTYDDILLK 200
Query: 431 DELERYQREHPSQFQVWYTIDRPTDGWKYSSGFINDEMIRDHLFPPSNDVLVLMCGPPPM 490
+ELE +P QF+++Y +++P + W GF++ EMI+ H P++D+ +L CGPPPM
Sbjct: 201 EELEGLTTNYPEQFKIFYVLNQPPEVWDGGVGFVSKEMIQTHCPAPASDIQILRCGPPPM 260
Query: 491 INFACNPALDKLGFKPDQRFAY 512
N A L+ LG+ P+ +F +
Sbjct: 261 -NKAMAANLEALGYSPEMQFQF 281
>At5g20080.1 68418.m02391 NADH-cytochrome b5 reductase, putative
similar to SP|P36060 NADH-cytochrome b5 reductase
precursor (EC 1.6.2.2) {Saccharomyces cerevisiae};
contains Pfam profiles PF00175: Oxidoreductase
NAD-binding domain, PF00970: oxidoreductase, FAD-binding
Length = 328
Score = 142 bits (344), Expect = 5e-34
Identities = 82/211 (38%), Positives = 123/211 (58%), Gaps = 30/211 (14%)
Query: 281 LTGLPIGQHIHLSAKINDDLVIRAYTPVSSDEDKGYVDLVIKVYFKNVHPKFPEGGKLSQ 340
LT P+G + K VIR YTP+S E KGY DL+IKVY P+G K+SQ
Sbjct: 115 LTRAPLGYNAEGKTKY----VIRPYTPISDPEAKGYFDLLIKVY--------PDG-KMSQ 161
Query: 341 YLNNMKINDTIDVRGPSGRLQYTGNGTFLIKKLRKDPPTKVVVKKLNLIAGGTGIAPMLQ 400
+ ++K D ++V+GP + +Y+ N + K + +IAGG+GI PMLQ
Sbjct: 162 HFASLKPGDVLEVKGPVEKFKYSPN----------------MKKHIGMIAGGSGITPMLQ 205
Query: 401 LVRHICTDVNDRTELKLLFANQSEDDILLRDELERYQREHPSQFQVWYTIDRPTDGWKYS 460
++ I + D T++ LL+AN S DDILL+ +L+ Q HP+ +++YT+D PT WK
Sbjct: 206 VIDAIVKNPEDNTQISLLYANVSPDDILLKQKLDVLQANHPN-LKIFYTVDNPTKNWKGG 264
Query: 461 SGFINDEMIRDHLFPPSNDVLVLMCGPPPMI 491
G+I+ +M L P++D L+L+CGPP M+
Sbjct: 265 VGYISKDMALKGLPLPTDDTLILVCGPPGMM 295
>At3g11900.1 68416.m01459 amino acid transporter family protein low
similarity to proton/amino acid transporter 1 [Mus
musculus] GI:21908024; belongs to INTERPRO:IPR002422
amino acid/polyamine transporter, family II
Length = 432
Score = 56.0 bits (129), Expect = 6e-08
Identities = 64/253 (25%), Positives = 113/253 (44%), Gaps = 48/253 (18%)
Query: 1 MPAAFKNAGTIVGIFGTIILGYICTHCVYLLVKTSQDV-SRVAKVPSLGYAETVEAVFAT 59
+P AF+ AG + G G II+G+ +C+ LL++ + S + S Y + T
Sbjct: 52 LPYAFRIAGWLAGSLGVIIVGFATYYCMLLLIQCRDKLESEEGEEESKTYGDLGFKCMGT 111
Query: 60 GPQTLRKFSRASRIFIDWAMAFTI-LGACAVYVILLVESVQQIVDYFYADNGINETMYCL 118
+ L +F + FT G Y++ + ++ I ++ G++ + +
Sbjct: 112 KGRYLTEF-----------LIFTAQCGGSVAYLVFIGRNLSSI----FSSYGLSMVSF-I 155
Query: 119 MFLVPILI-FTQIENLKYLAPFSGFANI--LLVLTFLI---CLYYICNEFPDLDSRPTSV 172
+ LVPI + + I +L L+PFS FA+I ++ + F++ I +F D S
Sbjct: 156 LILVPIEVGLSWITSLSALSPFSIFADICNIIAMCFVVKENVEMVIEGDFSFSDRTAISS 215
Query: 173 NIGNLPLFIGLS----GGTELTMSV--------------------VVLLYMIMGFLGYVK 208
IG LP G++ G +T+++ + +Y++ GF GY+
Sbjct: 216 TIGGLPFAGGVAVFCFEGFAMTLALESSMREREAFPKLLAKVLAGITFVYVLFGFCGYMA 275
Query: 209 YGDQAMGSITLNL 221
YGDQ ITLNL
Sbjct: 276 YGDQTKDIITLNL 288
>At5g65990.1 68418.m08308 amino acid transporter family protein
similar to proton/amino acid transporter 1 [Mus
musculus] GI:21908024; contains Pfam profile PF01490:
Transmembrane amino acid transporter protein
Length = 427
Score = 49.2 bits (112), Expect = 6e-06
Identities = 61/254 (24%), Positives = 107/254 (42%), Gaps = 42/254 (16%)
Query: 1 MPAAFKNAGTIVGIFGTIILGYICTHCVYLLVKTSQDVSRVAKVPSL-GYAETVEAVFAT 59
+P FK G ++G+ + + + C+ LLV T + + ++ S+ + + E+V
Sbjct: 59 LPYTFKKTGWLLGLLTLLFVSSLTFFCMMLLVHTRRKLESLSGFNSITSFGDLGESV--C 116
Query: 60 GPQTLRKFSRASRIFIDWAMAFTILGACAVYVILLVESVQQIVDYFYAD-NGINETMYCL 118
GP A R+ +D + + G C Y+I + ++ ++ G++ L
Sbjct: 117 GP--------AGRLVVDVMLVLSQSGFCVSYLIFVATTMANLLSRGTEHILGLDAASIYL 168
Query: 119 MFLVPI-LIFTQIENLKYLAPFSGFANILLVLTFLICLYYICNEFPDLDSRPTSVNIGNL 177
P L I +L +LAP S FA+I+ V L+ + + + F L RP G +
Sbjct: 169 WGCFPFQLGLNSIPSLTHLAPLSIFADIVDVAATLVVM--VQDVFIFLKRRPPLRVFGGV 226
Query: 178 PLF-------------IGLSGGTEL--------------TMSVVVLLYMIMGFLGYVKYG 210
+F IG+ EL M ++ ++Y G LGY+ YG
Sbjct: 227 SVFFYGLGVAVYAFEGIGMVLPLELEAKYKDKFGRALGLAMGLISIMYGAFGLLGYMAYG 286
Query: 211 DQAMGSITLNLDTG 224
++ IT NL TG
Sbjct: 287 EETKDIITTNLGTG 300
>At1g30510.3 68414.m03730 ferredoxin--NADP(+) reductase, putative /
adrenodoxin reductase, putative strong similarity to
SP|P41345 Ferredoxin--NADP reductase, root isozyme,
chloroplast precursor (EC 1.18.1.2) (FNR) {Oryza
sativa}, ferredoxin-NADP reductase precursor [Zea mays]
GI:500751
Length = 317
Score = 44.0 bits (99), Expect = 2e-04
Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 13/161 (8%)
Query: 333 PEGGKLSQYLNNMKINDTIDVRGPSGRLQYTGNGTFLIKKLRKDPPTKVVVKKLNLIAGG 392
PE GK N + N D + P ++Q TG ++ DP + +IA G
Sbjct: 122 PETGKEDPSKNGVCSNFLCDSK-PGDKIQITGPSGKVMLLPESDPNATHI-----MIATG 175
Query: 393 TGIAPMLQLVRHI-CTDVNDRT--ELKLLFANQSEDDILLRD-ELERYQREHPSQFQVWY 448
TG+AP +R + +V ++T L LF + D LL D E +Y ++HP F+
Sbjct: 176 TGVAPYRGYLRRMFMENVPNKTFSGLAWLFLGVANTDSLLYDEEFTKYLKDHPDNFRFDK 235
Query: 449 TIDRPTDGWKYSSGFIND--EMIRDHLFP-PSNDVLVLMCG 486
+ R K ++ D E D +F N + CG
Sbjct: 236 ALSREEKNKKGGKMYVQDKIEEYSDEIFKLLDNGAHIYFCG 276
>At1g30510.2 68414.m03732 ferredoxin--NADP(+) reductase, putative /
adrenodoxin reductase, putative strong similarity to
SP|P41345 Ferredoxin--NADP reductase, root isozyme,
chloroplast precursor (EC 1.18.1.2) (FNR) {Oryza
sativa}, ferredoxin-NADP reductase precursor [Zea mays]
GI:500751
Length = 382
Score = 44.0 bits (99), Expect = 2e-04
Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 13/161 (8%)
Query: 333 PEGGKLSQYLNNMKINDTIDVRGPSGRLQYTGNGTFLIKKLRKDPPTKVVVKKLNLIAGG 392
PE GK N + N D + P ++Q TG ++ DP + +IA G
Sbjct: 187 PETGKEDPSKNGVCSNFLCDSK-PGDKIQITGPSGKVMLLPESDPNATHI-----MIATG 240
Query: 393 TGIAPMLQLVRHI-CTDVNDRT--ELKLLFANQSEDDILLRD-ELERYQREHPSQFQVWY 448
TG+AP +R + +V ++T L LF + D LL D E +Y ++HP F+
Sbjct: 241 TGVAPYRGYLRRMFMENVPNKTFSGLAWLFLGVANTDSLLYDEEFTKYLKDHPDNFRFDK 300
Query: 449 TIDRPTDGWKYSSGFIND--EMIRDHLFP-PSNDVLVLMCG 486
+ R K ++ D E D +F N + CG
Sbjct: 301 ALSREEKNKKGGKMYVQDKIEEYSDEIFKLLDNGAHIYFCG 341
>At1g30510.1 68414.m03731 ferredoxin--NADP(+) reductase, putative /
adrenodoxin reductase, putative strong similarity to
SP|P41345 Ferredoxin--NADP reductase, root isozyme,
chloroplast precursor (EC 1.18.1.2) (FNR) {Oryza
sativa}, ferredoxin-NADP reductase precursor [Zea mays]
GI:500751
Length = 381
Score = 44.0 bits (99), Expect = 2e-04
Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 13/161 (8%)
Query: 333 PEGGKLSQYLNNMKINDTIDVRGPSGRLQYTGNGTFLIKKLRKDPPTKVVVKKLNLIAGG 392
PE GK N + N D + P ++Q TG ++ DP + +IA G
Sbjct: 186 PETGKEDPSKNGVCSNFLCDSK-PGDKIQITGPSGKVMLLPESDPNATHI-----MIATG 239
Query: 393 TGIAPMLQLVRHI-CTDVNDRT--ELKLLFANQSEDDILLRD-ELERYQREHPSQFQVWY 448
TG+AP +R + +V ++T L LF + D LL D E +Y ++HP F+
Sbjct: 240 TGVAPYRGYLRRMFMENVPNKTFSGLAWLFLGVANTDSLLYDEEFTKYLKDHPDNFRFDK 299
Query: 449 TIDRPTDGWKYSSGFIND--EMIRDHLFP-PSNDVLVLMCG 486
+ R K ++ D E D +F N + CG
Sbjct: 300 ALSREEKNKKGGKMYVQDKIEEYSDEIFKLLDNGAHIYFCG 340
>At4g05390.1 68417.m00821 ferredoxin--NADP(+) reductase, putative /
adrenodoxin reductase, putative strong similarity to
SP|P41345 Ferredoxin--NADP reductase, root isozyme,
chloroplast precursor (EC 1.18.1.2) (FNR) {Oryza
sativa}, ferredoxin-NADP reductase precursor [Zea mays]
GI:500751
Length = 378
Score = 41.5 bits (93), Expect = 0.001
Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 21/160 (13%)
Query: 334 EGGKLSQYLNNMKINDTIDVRGPSGRLQYTGNGTFLIKKLRKDPPTKVVVKKLNLIAGGT 393
+ G S +L N K D + + GPSG+ + L +D P + +IA GT
Sbjct: 192 KAGVCSNFLCNAKPGDKVKITGPSGK----------VMLLPEDDPKATHI----MIATGT 237
Query: 394 GIAPMLQLVRHICTD--VNDRTE-LKLLFANQSEDDILLRD-ELERYQREHPSQFQVWYT 449
G+AP +R + + N + + L LF + D LL D E Y++++P F+
Sbjct: 238 GVAPYRGYLRRMFMENVPNFKFDGLAWLFLGVANSDSLLYDEEFAGYRKDYPENFRYDKA 297
Query: 450 IDRPTDGWKYSSGFIND--EMIRDHLFP-PSNDVLVLMCG 486
+ R K ++ D E D +F N + CG
Sbjct: 298 LSREEKNKKGGKMYVQDKIEEYSDEIFKLLDNGAHIYFCG 337
>At2g39130.1 68415.m04807 amino acid transporter family protein
belongs to INTERPRO:IPR002422 amino acid/polyamine
transporter, family II
Length = 550
Score = 37.9 bits (84), Expect = 0.016
Identities = 29/127 (22%), Positives = 58/127 (45%), Gaps = 12/127 (9%)
Query: 67 FSRASRIFIDWAMAFTILGACAVYVILLVESVQQI-------VDYFYADNGINETMYCLM 119
F RIF+ + + C Y+IL +++ + + F D + +
Sbjct: 231 FGTTGRIFVSIVLYLELYACCVEYIILESDNLSSLYPNAALSIGGFQLDARHLFALLTTL 290
Query: 120 FLVPILIFTQIENLKYLAPFSGFANILLVLTFLICLYYI-CNEFPDLDSRPTSVNIGNLP 178
++P + + L Y++ A++L+VL CL++I + + S+ T++N+ LP
Sbjct: 291 AVLPTVWLRDLSVLSYISAGGVIASVLVVL----CLFWIGLVDEVGIHSKGTTLNLSTLP 346
Query: 179 LFIGLSG 185
+ IGL G
Sbjct: 347 VAIGLYG 353
>At4g38250.1 68417.m05402 amino acid transporter family protein low
similarity to lysosomal amino acid transporter 1 [Rattus
norvegicus] GI:14571904; contains Pfam profile PF01490:
Transmembrane amino acid transporter protein
Length = 436
Score = 35.9 bits (79), Expect = 0.064
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 189 LTMSVVVLLYMIMGFLGYVKYGDQAMGSITLNLDTG 224
L M + L+Y+ G LGY+ +G+ M IT NL G
Sbjct: 274 LGMGFISLIYIAFGILGYLAFGEDTMDIITANLGAG 309
Score = 33.9 bits (74), Expect = 0.26
Identities = 40/195 (20%), Positives = 77/195 (39%), Gaps = 24/195 (12%)
Query: 1 MPAAFKNAGTIVGIFGTIILGYICTHCVYLLVKTSQDVSRVAKVPSLGYAETVEAVFATG 60
+P AFK G ++G+ + + + HC+ LLV T + + + + + + G
Sbjct: 55 LPYAFKRTGWLMGVLLLVSVSVLTHHCMMLLVYTRRKLD--------SFNAGISKIGSFG 106
Query: 61 PQTLRKFSRASRIFIDWAMAFTILGACAVYVILLVESVQQIVDYFYADN----------- 109
RI +D + + G C Y+I + ++ + D +
Sbjct: 107 DLGFAVCGSLGRIVVDLFIILSQAGFCVGYLIFIGTTLANLSDPESPTSLRHQFTRLGSE 166
Query: 110 --GINETMYCLMFLVPI-LIFTQIENLKYLAPFSGFANILLVLTFLICLYYICNEFPDLD 166
G++ + P L I+ L +LAP S FA+I+ + + + + + L
Sbjct: 167 FLGVSSKSLYIWGCFPFQLGLNSIKTLTHLAPLSIFADIVDLGAMAVVI--VEDSMIILK 224
Query: 167 SRPTSVNIGNLPLFI 181
RP V G + LF+
Sbjct: 225 QRPDVVAFGGMSLFL 239
>At2g42005.1 68415.m05196 amino acid transporter family protein low
similarity to proton/amino acid transporter 1 [Mus
musculus] GI:21908024; contains Pfam profile PF01490:
Transmembrane amino acid transporter protein
Length = 413
Score = 35.1 bits (77), Expect = 0.11
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 189 LTMSVVVLLYMIMGFLGYVKYGDQAMGSITLNLDTG 224
L+M + ++Y G LGY+ +GD M IT NL G
Sbjct: 253 LSMLFIAVMYGSFGVLGYMAFGDDTMDIITANLGAG 288
Score = 32.7 bits (71), Expect = 0.60
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 1 MPAAFKNAGTIVGIFGTIILGYICTHCVYLLV--KTSQDVSRVAKVPSLGYA 50
+P AFK G ++G+ + + HC+ LLV + VS + LG+A
Sbjct: 44 LPYAFKRTGWLMGLLTLFSVAALINHCMMLLVHIRRKLGVSNIGSFGDLGFA 95
>At1g15140.1 68414.m01808 oxidoreductase NAD-binding
domain-containing protein Contains Pfam profile PF00175:
Oxidoreductase NAD-binding domain; ESTs gb|H76345 and
gb|AA651465 come from this gene
Length = 295
Score = 34.3 bits (75), Expect = 0.20
Identities = 31/155 (20%), Positives = 71/155 (45%), Gaps = 15/155 (9%)
Query: 336 GKLSQYLNNMKINDTIDVRGPSGRLQYTGNGTFLIKKLRKDPPTKVVVKKLNLIAGGTGI 395
G ++ L +K +T+++ GNG F I + DPP + + + A G+GI
Sbjct: 134 GSTAEILCGLKKGETVELSS------VMGNG-FNIDLI--DPPEEYPT--VLIFATGSGI 182
Query: 396 APMLQLVRHICTDVNDRTELKLLFANQSEDDILLRDELERYQREHPSQFQVWYTIDRPTD 455
+P+ L+ + R++++L + ++ + + +++ + ++ + +V + +P D
Sbjct: 183 SPIRSLIES-GFGADRRSDVRLYYGARNLNRMAYQEKFKEWES---AGVKVVPVLSQPDD 238
Query: 456 GWKYSSGFINDEMIRDHLFPPSNDVLVLMCGPPPM 490
GWK +G++ R ++CG M
Sbjct: 239 GWKGETGYVQAAFARAKQLSAPKATGAVLCGQKQM 273
>At5g09220.1 68418.m01045 amino acid permease 2 (AAP2) identical to
amine acid permease AAP2 [Arabidopsis thaliana]
GI:510236
Length = 493
Score = 33.5 bits (73), Expect = 0.34
Identities = 11/31 (35%), Positives = 22/31 (70%)
Query: 187 TELTMSVVVLLYMIMGFLGYVKYGDQAMGSI 217
T+++++V + YM+ G +GY +GD A G++
Sbjct: 292 TKISIAVTTIFYMLCGSMGYAAFGDAAPGNL 322
>At2g42480.1 68415.m05255 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein similar to
ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 743
Score = 33.5 bits (73), Expect = 0.34
Identities = 28/131 (21%), Positives = 60/131 (45%), Gaps = 8/131 (6%)
Query: 302 IRAYTPVSSDEDKGYVD---LVIKVYFKNVHPKFPEGGKLSQYLNNMKINDTIDVRGPSG 358
IR P+S E+KG+++ L+++VY KN EGG +S+ + + I + +
Sbjct: 105 IRKALPLSKFEEKGFLEKDKLIVEVYIKNFEAVDGEGGGVSKKEEEETV-EIIGSQDYAS 163
Query: 359 RLQYTGNGTFLIKKLRKDPPTKVVVKKLNLIAGGTGIAPMLQLVRHICTDVNDRTELKLL 418
+ + G+ T + K + P K N + + ++R+ V++ E+K+
Sbjct: 164 QASFKGSVTLVRKIFAEHPEIAEEFKPKNQVFK----KEYMNILRNAYRKVSELAEVKMD 219
Query: 419 FANQSEDDILL 429
+ +++ L
Sbjct: 220 WVKSKIEEVSL 230
>At5g63850.1 68418.m08015 amino acid transporter 4, putative (AAP4)
identical to amino acid transporter GI:608671 from
[Arabidopsis thaliana];
Length = 466
Score = 32.7 bits (71), Expect = 0.60
Identities = 11/31 (35%), Positives = 21/31 (67%)
Query: 187 TELTMSVVVLLYMIMGFLGYVKYGDQAMGSI 217
T ++++V YM+ G +GY +GD+A G++
Sbjct: 265 TRISIAVTTTFYMLCGCMGYAAFGDKAPGNL 295
>At3g28960.1 68416.m03620 amino acid transporter family protein low
similarity to vesicular inhibitory amino acid
transporter [Mus musculus] GI:2826776; contains
INTERPRO:IPR002422 amino acid/polyamine transporter,
family II
Length = 405
Score = 31.5 bits (68), Expect = 1.4
Identities = 13/24 (54%), Positives = 15/24 (62%)
Query: 198 YMIMGFLGYVKYGDQAMGSITLNL 221
Y M LGY+ YG Q + ITLNL
Sbjct: 246 YTSMAVLGYLMYGSQTLSQITLNL 269
>At1g15140.3 68414.m01810 oxidoreductase NAD-binding
domain-containing protein Contains Pfam profile PF00175:
Oxidoreductase NAD-binding domain; ESTs gb|H76345 and
gb|AA651465 come from this gene
Length = 271
Score = 31.5 bits (68), Expect = 1.4
Identities = 27/129 (20%), Positives = 65/129 (50%), Gaps = 15/129 (11%)
Query: 336 GKLSQYLNNMKINDTIDVRGPSGRLQYTGNGTFLIKKLRKDPPTKVVVKKLNLIAGGTGI 395
G ++ L +K +T+++ GNG F I + DPP + + + A G+GI
Sbjct: 134 GSTAEILCGLKKGETVELSS------VMGNG-FNIDLI--DPPEEYPT--VLIFATGSGI 182
Query: 396 APMLQLVRHICTDVNDRTELKLLFANQSEDDILLRDELERYQREHPSQFQVWYTIDRPTD 455
+P+ L+ + R++++L + ++ + + +++ + ++ + +V + +P D
Sbjct: 183 SPIRSLIES-GFGADRRSDVRLYYGARNLNRMAYQEKFKEWES---AGVKVVPVLSQPDD 238
Query: 456 GWKYSSGFI 464
GWK +G++
Sbjct: 239 GWKGETGYV 247
>At1g15140.2 68414.m01809 oxidoreductase NAD-binding
domain-containing protein Contains Pfam profile PF00175:
Oxidoreductase NAD-binding domain; ESTs gb|H76345 and
gb|AA651465 come from this gene
Length = 271
Score = 31.5 bits (68), Expect = 1.4
Identities = 27/129 (20%), Positives = 65/129 (50%), Gaps = 15/129 (11%)
Query: 336 GKLSQYLNNMKINDTIDVRGPSGRLQYTGNGTFLIKKLRKDPPTKVVVKKLNLIAGGTGI 395
G ++ L +K +T+++ GNG F I + DPP + + + A G+GI
Sbjct: 134 GSTAEILCGLKKGETVELSS------VMGNG-FNIDLI--DPPEEYPT--VLIFATGSGI 182
Query: 396 APMLQLVRHICTDVNDRTELKLLFANQSEDDILLRDELERYQREHPSQFQVWYTIDRPTD 455
+P+ L+ + R++++L + ++ + + +++ + ++ + +V + +P D
Sbjct: 183 SPIRSLIES-GFGADRRSDVRLYYGARNLNRMAYQEKFKEWES---AGVKVVPVLSQPDD 238
Query: 456 GWKYSSGFI 464
GWK +G++
Sbjct: 239 GWKGETGYV 247
>At5g43040.1 68418.m05254 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 551
Score = 31.1 bits (67), Expect = 1.8
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 22 YICTHCVYLLVKTSQDVSRVAKVPSLGYAETVEA 55
YICTHC ++L +T ++S+ + PS+ T+ A
Sbjct: 292 YICTHCDFILHETCANLSKKKRHPSVSRQLTLYA 325
>At3g56200.1 68416.m06246 amino acid transporter family protein low
similarity to N system amino acids transporter NAT-1
[Mus musculus] GI:7406950; belongs to INTERPRO:IPR002422
amino acid/polyamine transporter, family II
Length = 435
Score = 31.1 bits (67), Expect = 1.8
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 187 TELTMSVVVLLYMIMGFLGYVKYGDQAMGSITLNLD 222
T++++ + +Y G GY+ +GD M I +N D
Sbjct: 258 TKISVILCAAIYFATGLFGYLLFGDATMSDILVNFD 293
>At1g77380.1 68414.m09011 amino acid carrier, putative / amino acid
permease, putative strong similarity to amino acid
carrier GI:3293031 from [Ricinus communis]; contains
Pfam profile PF01490: Transmembrane amino acid
transporter protein; identical to cDNA AAP3 (Amino Acid
Permease) GI:3970651
Length = 476
Score = 31.1 bits (67), Expect = 1.8
Identities = 11/31 (35%), Positives = 21/31 (67%)
Query: 187 TELTMSVVVLLYMIMGFLGYVKYGDQAMGSI 217
T +++SV + YM+ G +GY +GD + G++
Sbjct: 276 TLVSVSVTTMFYMLCGCMGYAAFGDLSPGNL 306
>At1g44100.1 68414.m05094 amino acid permease 5, putative (AAP5)
nearly identical to amino acid permease (AAP5) GI:608673
from [Arabidopsis thaliana]
Length = 480
Score = 31.1 bits (67), Expect = 1.8
Identities = 11/31 (35%), Positives = 21/31 (67%)
Query: 187 TELTMSVVVLLYMIMGFLGYVKYGDQAMGSI 217
T ++++V + YM+ G +GY +GD A G++
Sbjct: 280 TFVSVAVTTVFYMLCGCVGYAAFGDNAPGNL 310
>At1g20020.1 68414.m02507 ferredoxin--NADP(+) reductase, putative /
adrenodoxin reductase, putative strong similarity to
Ferredoxin--NADP reductase, chloroplast precursor (EC
1.18.1.2) (FNR) from {Pisum sativum} SP|P10933,
{Mesembryanthemum crystallinum} SP|P41343, {Spinacia
oleracea} SP|P00455, [Capsicum annuum] GI:6899972
Length = 369
Score = 31.1 bits (67), Expect = 1.8
Identities = 24/98 (24%), Positives = 42/98 (42%), Gaps = 9/98 (9%)
Query: 375 KDPPTKVVVKKLNLIAGGTGIAPMLQLVRHICTDVNDRTELK----LLFANQSEDDILLR 430
KDP V+ ++A GTGIAP + + + +D + L + +L +
Sbjct: 214 KDPNATVI-----MLATGTGIAPFRSFLWKMFFEKHDDYKFNGLAWLFLGVPTTSSLLYQ 268
Query: 431 DELERYQREHPSQFQVWYTIDRPTDGWKYSSGFINDEM 468
+E ++ + + P F+V Y I R K +I M
Sbjct: 269 EEFDKMKAKAPENFRVDYAISREQANDKGEKMYIQTRM 306
>At5g15240.1 68418.m01785 amino acid transporter family protein low
similarity to amino acid transporter system A3 [Homo
sapiens] GI:13876616; belongs to INTERPRO:IPR002422
amino acid/polyamine transporter, family II
Length = 423
Score = 30.3 bits (65), Expect = 3.2
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 189 LTMSVVVLLYMIMGFLGYVKYGDQAMGSITLNLDT 223
+ ++ +Y + LGY+ YG ITLNL T
Sbjct: 255 ICFTICTFIYASVAVLGYLMYGSDVESQITLNLPT 289
>At5g64500.1 68418.m08103 membrane protein-related contains weak
similarity to spinster type IV (GI:12003976) [Drosophila
melanogaster]
Length = 484
Score = 29.9 bits (64), Expect = 4.2
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 133 LKYLAPFSGFANILL---VLTFLICLYYICNEFPDLDSRPTSVNIGNLPLFIGLSGGTEL 189
L + A F G A ++L VL F+I ++ PD +P + N+ LP+ G S +
Sbjct: 205 LPWRAAFWGEAILMLPFAVLGFVIKPLHLKGFAPDDTGKPRTDNLNVLPVGYGFSAVMKD 264
Query: 190 TMSVVVLLYMIMGFLGYVKY 209
++V + LGY+ Y
Sbjct: 265 LKLLLVDKVYVTNILGYIAY 284
>At3g21520.1 68416.m02715 expressed protein contains Pfam profile
PF05078: Protein of unknown function (DUF679)
Length = 207
Score = 29.9 bits (64), Expect = 4.2
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 3 AAFKNAGTIVGIFGTIILGYICT-HCVYLLVKTSQDVSRVAKVPSLGYAE-TVEAVF 57
A F +AG ++ +FGT++L T C Y + +Q +A P++G A T+ A+F
Sbjct: 122 ADFVHAGFVLAVFGTLVLLDANTASCFYPRFRETQKTLVMALPPAVGVASATIFALF 178
>At3g14770.1 68416.m01867 nodulin MtN3 family protein similar to
MtN3 GI:1619602 (root nodule development) from [Medicago
truncatula]
Length = 236
Score = 29.9 bits (64), Expect = 4.2
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 119 MFLVPILIFTQIENLKYLAPFSGFANILLVLTFLICLYY 157
+F+ P+ F +I K FSG I +L LICL+Y
Sbjct: 28 LFVSPMPTFRRIMRNKSTEQFSGLPYIYALLNCLICLWY 66
>At4g02680.1 68417.m00363 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain
Length = 888
Score = 29.5 bits (63), Expect = 5.6
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Query: 7 NAGTIVGIFGTIILGYICTHCVYLLVKTSQDVSRVAKVPSLGYAETVEAVFATGPQTLRK 66
N G + G LGYI H ++ K S +S V+ P LG+ + + G + L
Sbjct: 409 NLGHVYSATGLARLGYIQGHRLWAYEKLSSVISSVS--PPLGWMYQERSFYCEGDKKLED 466
Query: 67 FSRASRI 73
+A+ +
Sbjct: 467 LEKATEL 473
>At3g54830.1 68416.m06074 amino acid transporter family protein
belongs to INTERPRO:IPR002422 amino acid/polyamine
transporter, family II
Length = 546
Score = 29.5 bits (63), Expect = 5.6
Identities = 25/127 (19%), Positives = 56/127 (44%), Gaps = 12/127 (9%)
Query: 67 FSRASRIFIDWAMAFTILGACAVYVILLVESVQQI-------VDYFYADNGINETMYCLM 119
F RI + + + Y+IL +++ + + F+ D + +
Sbjct: 221 FGSTGRILVSVILYMELYAMSVEYIILEGDNLSSMFPNASLSIGGFHLDAPRLFALLTTL 280
Query: 120 FLVPILIFTQIENLKYLAPFSGFANILLVLTFLICLYYI-CNEFPDLDSRPTSVNIGNLP 178
++P + + L Y++ A++L+VL CL+++ + + S+ T +N+ LP
Sbjct: 281 AVLPTVWLRDLSVLSYISAGGVIASVLVVL----CLFWVGLVDDVGIHSKGTPLNLATLP 336
Query: 179 LFIGLSG 185
+ +GL G
Sbjct: 337 VSVGLYG 343
>At2g41190.1 68415.m05087 amino acid transporter family protein low
similarity to vesicular GABA transporter [Rattus
norvegicus] GI:2587061; belongs to INTERPRO:IPR002422
amino acid/polyamine transporter, family II
Length = 536
Score = 29.5 bits (63), Expect = 5.6
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 193 VVVLLYMIMGFLGYVKYGDQAMGSITLNL 221
+ VLLY + +GY+ +G+ + ITLN+
Sbjct: 372 ICVLLYGGVAIMGYLMFGEATLSQITLNM 400
>At3g09330.1 68416.m01107 amino acid transporter family protein
belongs to INTERPRO:IPR002422 amino acid/polyamine
transporter, family II
Length = 524
Score = 29.1 bits (62), Expect = 7.4
Identities = 25/127 (19%), Positives = 58/127 (45%), Gaps = 12/127 (9%)
Query: 67 FSRASRIFIDWAMAFTILGACAVYVILLVESVQQIVDYFYADN-GINE------TMYCLM 119
F R+ I + + C Y+I++ +++ ++ + G++ + +
Sbjct: 205 FGFTGRLIISILLYMELYVCCVEYIIMMSDNLSRVFPNITLNIVGVSLDSPQIFAISATL 264
Query: 120 FLVPILIFTQIENLKYLAPFSGFANILLVLTFLICLYYICN-EFPDLDSRPTSVNIGNLP 178
++P + + L YL+ F +ILL L CL+++ + + + S+++ NLP
Sbjct: 265 IVLPTVWLKDLSLLSYLSAGGVFVSILLAL----CLFWVGSVDGVGFHTGGKSLDLANLP 320
Query: 179 LFIGLSG 185
+ IG+ G
Sbjct: 321 VAIGIFG 327
>At4g35180.1 68417.m05001 amino acid transporter family protein
similar to amino acid permease 1 GI:976402 from
[Nicotiana sylvestris]; contains Pfam profile PF01490:
Transmembrane amino acid transporter protein
Length = 456
Score = 28.7 bits (61), Expect = 9.7
Identities = 41/138 (29%), Positives = 59/138 (42%), Gaps = 14/138 (10%)
Query: 1 MPAAFKNAGTIVGIFGTIILGYICTHCVYLLVKTSQDVSRVAKVPSLGYAETVEAVFATG 60
+PAAF G + +GTIIL V+ L T V VP + + V A+
Sbjct: 59 LPAAFAALGWV---WGTIIL---TVGFVWKLYTTWLLVQLHEAVPGIRISRYVRLAIASF 112
Query: 61 PQTLRKFSRASRIFIDWAMAFTILGACAVYVILLVESVQQIVDYFYADNGINET-MYC-L 118
L K IF + + GAC + VI +S+QQ++ DN T + C L
Sbjct: 113 GVKLGKLLG---IF---PVMYLSGGACTILVITGGKSIQQLLQIMSDDNTAPLTSVQCFL 166
Query: 119 MFLVPILIFTQIENLKYL 136
+F +I +Q NL L
Sbjct: 167 VFSCIAMIMSQFPNLNSL 184
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.325 0.142 0.430
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,078,276
Number of Sequences: 28952
Number of extensions: 519925
Number of successful extensions: 1525
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 1479
Number of HSP's gapped (non-prelim): 50
length of query: 512
length of database: 12,070,560
effective HSP length: 84
effective length of query: 428
effective length of database: 9,638,592
effective search space: 4125317376
effective search space used: 4125317376
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 61 (28.7 bits)
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