Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001152-TA|BGIBMGA001152-PA|IPR013057|Amino acid
transporter, transmembrane, IPR008333|Oxidoreductase FAD-binding
region, IPR001433|Oxidoreductase FAD/NAD(P)-binding,
IPR001834|NADH:cytochrome b5 reductase (CBR), IPR001709|Flavoprotein
pyridine nucleotide cytochrome reductase
(512 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_52888| Best HMM Match : FAD_binding_6 (HMM E-Value=0) 184 1e-46
SB_23418| Best HMM Match : NAD_binding_1 (HMM E-Value=1.2e-16) 100 3e-21
SB_43965| Best HMM Match : Aa_trans (HMM E-Value=7.5e-08) 79 1e-14
SB_22666| Best HMM Match : Peptidase_M10 (HMM E-Value=9.3e-37) 62 1e-09
SB_43964| Best HMM Match : Aa_trans (HMM E-Value=9.2e-05) 60 4e-09
SB_576| Best HMM Match : RVT_1 (HMM E-Value=0) 54 2e-07
SB_15337| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.078
SB_31490| Best HMM Match : Aa_trans (HMM E-Value=4.9e-31) 32 0.96
SB_19322| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.2
SB_38291| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.2
SB_46577| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.9
SB_45367| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.1
SB_1563| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.9
SB_28080| Best HMM Match : Glycolytic (HMM E-Value=0) 29 8.9
SB_9344| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.9
>SB_52888| Best HMM Match : FAD_binding_6 (HMM E-Value=0)
Length = 231
Score = 184 bits (449), Expect = 1e-46
Identities = 83/142 (58%), Positives = 108/142 (76%)
Query: 281 LTGLPIGQHIHLSAKINDDLVIRAYTPVSSDEDKGYVDLVIKVYFKNVHPKFPEGGKLSQ 340
+ GLP+G H++LSA I+D VIR YTPV+SD++KG+ +LVIKVYFKNVHPKFPEGGK+SQ
Sbjct: 90 ILGLPVGNHMYLSATIDDKPVIRPYTPVTSDDEKGFFELVIKVYFKNVHPKFPEGGKMSQ 149
Query: 341 YLNNMKINDTIDVRGPSGRLQYTGNGTFLIKKLRKDPPTKVVVKKLNLIAGGTGIAPMLQ 400
YL ++KI DT+D+RGP+G+L Y G GT IK+ + P K L LIAGGTGI PMLQ
Sbjct: 150 YLESLKIGDTVDIRGPAGKLIYKGRGTISIKESIRKPEQLRKAKFLGLIAGGTGITPMLQ 209
Query: 401 LVRHICTDVNDRTELKLLFANQ 422
+++ + D D T + L+FANQ
Sbjct: 210 IIKAVLKDSGDHTTVSLIFANQ 231
>SB_23418| Best HMM Match : NAD_binding_1 (HMM E-Value=1.2e-16)
Length = 594
Score = 100 bits (239), Expect = 3e-21
Identities = 75/241 (31%), Positives = 119/241 (49%), Gaps = 25/241 (10%)
Query: 255 WRNTKDHVAQKYHNITEAVMRAVFAALTGLPIGQHIHLSAKINDDLVIRAYTPV--SSDE 312
W T V + HN L +P+G H+H+ I + R+YT V S +
Sbjct: 129 WECTVTSVEEVSHNTQLLGFELPPGVLMRVPVGHHVHVKRNIQGMEITRSYTVVLPSLNI 188
Query: 313 DKGYVDLVIKVYFKNVHPKFPEGGKLSQYLNNMKINDTIDVRGPSGRLQYTGNGTFLIKK 372
D+ + + ++ + +P+G L+ L + + D + + Y+G+ F + +
Sbjct: 189 DRTEREYEGRRFYLMIKI-YPDGA-LTPTLQQLAVGDKVLIS------DYSGD--FQVSR 238
Query: 373 LRKDPPTKVVVKKLNLIAGGTGIAPMLQLVRH-ICTDVNDRTELKLLFANQSEDDILLRD 431
L V K + LIAGGTG PM++++R I D +KLLFANQ E DIL R
Sbjct: 239 LS-------VAKDVCLIAGGTGFTPMVRIIRKLIVEDPKATVSVKLLFANQEEKDILWRK 291
Query: 432 ELERYQREHPSQFQVWYTIDRPTDGWKYSSGFINDEMIRDHLFPP-----SNDVLVLMCG 486
+L+ +FQV YTI +PT W+ G I++EM+ D L PP ++D+L+ +CG
Sbjct: 292 QLDDLVEASNQRFQVLYTISKPTAEWEGYEGRISNEMLLDALPPPPAEKNASDLLIGICG 351
Query: 487 P 487
P
Sbjct: 352 P 352
>SB_43965| Best HMM Match : Aa_trans (HMM E-Value=7.5e-08)
Length = 373
Score = 78.6 bits (185), Expect = 1e-14
Identities = 72/260 (27%), Positives = 108/260 (41%), Gaps = 30/260 (11%)
Query: 47 LGYAETVEAVFATGPQTLRKFSRASRIFIDWAMAFTILGACAVYVILLVESVQQIVDYFY 106
LGYA E Q + RI I+ + T+ G CA+Y + + ES+QQ D Y
Sbjct: 69 LGYAGVAEKCIG---QYYPHKAHIGRILINIFLLITMFGFCAIYFLFVAESLQQAFDA-Y 124
Query: 107 ADNGINETMYCLMFLVPILIFTQIENLKYLAPFSGFANILLVLTFLICLYYICNEFPDLD 166
++ ++ L+ LVP+++ + I LK LA S +N+L + + L Y + D
Sbjct: 125 TSFKLDVKLWVLIILVPVILLSFIRTLKILAVLSSVSNVLALFGTVCVLSYAGSTVHDPS 184
Query: 167 SRPTSVNIGNLPLF----------IGLSGGTELTMSV--------------VVLLYMIMG 202
+ P + LPL IG+ E M++ V LLY++MG
Sbjct: 185 TLPLT-QWKTLPLAFGAVVFTYEGIGVILPVENMMAIPRRFRWVLYAGMSLVTLLYLLMG 243
Query: 203 FLGYVKYGDQAMGSITLNLDTGEXXXXXXXXXXXXXXXXTYTLQFYVPMEIVWRNTKDHV 262
LGY+ G GSITLNL TY +QFYV I++ K V
Sbjct: 244 VLGYLSCGTSCQGSITLNL-PNTPFYMSVKLIIAASIFLTYFIQFYVITSILFPFVKGRV 302
Query: 263 AQKYHNITEAVMRAVFAALT 282
Q + + R + T
Sbjct: 303 RQTIAPLVDIAFRMLLVCFT 322
>SB_22666| Best HMM Match : Peptidase_M10 (HMM E-Value=9.3e-37)
Length = 359
Score = 61.7 bits (143), Expect = 1e-09
Identities = 40/109 (36%), Positives = 63/109 (57%), Gaps = 8/109 (7%)
Query: 384 KKLNLIAGGTGIAPMLQLVRHICTDVNDRTELKLLFANQSEDDILLRDELERYQREHPSQ 443
+++ ++A GTGIAPMLQ++ I + D T +KLLF+ + ++IL++DEL+ +++H
Sbjct: 228 RRIFMLAAGTGIAPMLQVIGQILDNDKDDTMVKLLFSCRHYEEILMKDELDN-RKDH-WN 285
Query: 444 FQVWYTIDRPTDGW-KYSS----GFINDEMIRDHL-FPPSNDVLVLMCG 486
F V Y I + D KY G I+ ++ L P V VLMCG
Sbjct: 286 FDVLYIISQEDDAQVKYGDHVHFGRIDQALLSSQLPSTPDPSVQVLMCG 334
Score = 29.9 bits (64), Expect = 5.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 292 LSAKINDDLVIRAYTPVSSDEDKGYVDLVIK 322
L K++D + R YTPVS + G+ ++IK
Sbjct: 196 LRGKVDDQFITRQYTPVSPLKSSGFFAVLIK 226
>SB_43964| Best HMM Match : Aa_trans (HMM E-Value=9.2e-05)
Length = 332
Score = 60.1 bits (139), Expect = 4e-09
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 189 LTMSVVVLLYMIMGFLGYVKYGDQAMGSITLNL-DTGEXXXXXXXXXXXXXXXXTYTLQF 247
L MSVVV+LY+++G +GY+ GS TLNL DT TY LQF
Sbjct: 154 LAMSVVVILYLVVGTMGYISCAAMCKGSFTLNLPDT--PFYTTLKLLIAGSMFLTYFLQF 211
Query: 248 YVPMEIVWRNTKDHVAQKYHNITEAVMRAVFAALT 282
YVP+EI+ + V++KY + + R +T
Sbjct: 212 YVPVEILLPSVLKRVSKKYQTVADLGFRTSLVLVT 246
>SB_576| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1444
Score = 54.4 bits (125), Expect = 2e-07
Identities = 22/47 (46%), Positives = 35/47 (74%)
Query: 415 LKLLFANQSEDDILLRDELERYQREHPSQFQVWYTIDRPTDGWKYSS 461
+ L+FANQ+E DIL+R+ELE ++ QF++WYT+DRP + ++S
Sbjct: 9 VSLIFANQTERDILVREELEFLASQNSDQFKLWYTLDRPPEADSFAS 55
>SB_15337| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 366
Score = 35.9 bits (79), Expect = 0.078
Identities = 18/73 (24%), Positives = 37/73 (50%)
Query: 111 INETMYCLMFLVPILIFTQIENLKYLAPFSGFANILLVLTFLICLYYICNEFPDLDSRPT 170
++ ++ ++ LVP+++ + I +L+ L+ S ANI ++ +I Y+ + P
Sbjct: 112 LDPKIWIVILLVPVILLSYIHSLRVLSVLSTMANICCLIGLVITFQYLGRNVHNPKLLPE 171
Query: 171 SVNIGNLPLFIGL 183
LPLF G+
Sbjct: 172 FDGWAALPLFFGM 184
>SB_31490| Best HMM Match : Aa_trans (HMM E-Value=4.9e-31)
Length = 974
Score = 32.3 bits (70), Expect = 0.96
Identities = 11/33 (33%), Positives = 20/33 (60%)
Query: 1 MPAAFKNAGTIVGIFGTIILGYICTHCVYLLVK 33
+P AFK +G +GI +++ I HC +++K
Sbjct: 404 LPFAFKQSGLALGIVALVLIATITDHCCQMIIK 436
Score = 30.7 bits (66), Expect = 2.9
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 115 MYCLMFLVP---ILIFTQIENLKYLAPFSGFANILLVLTFLICLYYICNEFPDLDSRPTS 171
M+ L+ L+P ++ I ++ L P SG ANI L+ F L I + + T
Sbjct: 575 MFPLLLLIPLPFVVAMAFIRKIRKLGPISGLANIALLAGFFGLLVQILDGLHFKLNDVTL 634
Query: 172 VNIGNLPLFIG 182
N P+F G
Sbjct: 635 ANWITFPIFFG 645
>SB_19322| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4994
Score = 31.1 bits (67), Expect = 2.2
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Query: 398 MLQLVRHICTDVNDRTELKLLFANQSEDDILLRDELERYQREHPSQFQVWYTIDRPTDGW 457
++ LVRH TD+N E ++ + S + L + E SQF W RP W
Sbjct: 4887 VITLVRHTLTDLNLAIEGTIIMSEISWESSTLGFWFTEFL-ERNSQFSAWLFQGRPNTFW 4945
Query: 458 KYSSGFINDE 467
+GF N +
Sbjct: 4946 --MTGFFNPQ 4953
>SB_38291| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 283
Score = 31.1 bits (67), Expect = 2.2
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Query: 398 MLQLVRHICTDVNDRTELKLLFANQSEDDILLRDELERYQREHPSQFQVWYTIDRPTDGW 457
++ LVRH TD+N E ++ + S + L + E SQF W RP W
Sbjct: 81 VITLVRHTLTDLNLAIEGTIIMSEISWESSTLGFWFTEFL-ERNSQFSAWLFQGRPNTFW 139
Query: 458 KYSSGFINDE 467
+GF N +
Sbjct: 140 --MTGFFNPQ 147
>SB_46577| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 30.3 bits (65), Expect = 3.9
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 409 VNDRTELKLLFANQSEDDILLRDELERYQREHPSQ 443
+NDR L+L+ N+ DILLR E +Y+ + Q
Sbjct: 155 LNDREVLRLVLTNERLRDILLRQEHVQYEHKFDGQ 189
>SB_45367| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 29.9 bits (64), Expect = 5.1
Identities = 15/54 (27%), Positives = 22/54 (40%)
Query: 255 WRNTKDHVAQKYHNITEAVMRAVFAALTGLPIGQHIHLSAKINDDLVIRAYTPV 308
W T V + HN L +P+G H+H+ I + R+YT V
Sbjct: 82 WECTLTSVEEVSHNTQLLGFELPPGVLMRVPVGHHVHVKRNIQGMEITRSYTVV 135
>SB_1563| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 762
Score = 29.1 bits (62), Expect = 8.9
Identities = 13/41 (31%), Positives = 24/41 (58%)
Query: 118 LMFLVPILIFTQIENLKYLAPFSGFANILLVLTFLICLYYI 158
L+ +VP+++ I ++ L P S +N+ L+ FL L Y+
Sbjct: 525 LIPVVPLILMAFIRRVRKLGPVSFISNLALLFAFLAVLGYM 565
>SB_28080| Best HMM Match : Glycolytic (HMM E-Value=0)
Length = 304
Score = 29.1 bits (62), Expect = 8.9
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 260 DHVAQKYHNITEAVMRAVFAALTGLPIGQHIHLSAK-INDDLVIRAYTPVSS 310
DH ++ +TEAV+ A + AL + HI+L + ++V A+ P +S
Sbjct: 194 DHTLERAQKVTEAVLSATYKAL----MDHHIYLEGTLLKPNMVTAAHPPFAS 241
>SB_9344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 341
Score = 29.1 bits (62), Expect = 8.9
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 364 GNGTFLIKKLRKDPPTKVVVKKLNLIAGGTG 394
G GT +++ DPP KVVVK LNL+ G
Sbjct: 161 GKGTLVVRPDSGDPP-KVVVKVLNLLGKAFG 190
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.325 0.142 0.430
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,766,083
Number of Sequences: 59808
Number of extensions: 715771
Number of successful extensions: 1661
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1639
Number of HSP's gapped (non-prelim): 21
length of query: 512
length of database: 16,821,457
effective HSP length: 85
effective length of query: 427
effective length of database: 11,737,777
effective search space: 5012030779
effective search space used: 5012030779
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 62 (29.1 bits)
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