GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001152-TA|BGIBMGA001152-PA|IPR013057|Amino acid
transporter, transmembrane, IPR008333|Oxidoreductase FAD-binding
region, IPR001433|Oxidoreductase FAD/NAD(P)-binding,
IPR001834|NADH:cytochrome b5 reductase (CBR), IPR001709|Flavoprotein
pyridine nucleotide cytochrome reductase
         (512 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    26   2.1  
AY045760-3|AAK84944.1|  168|Anopheles gambiae D7-related 2 prote...    25   4.8  
AJ133853-1|CAB39728.1|  168|Anopheles gambiae D7-related 2 prote...    25   4.8  
AJ000036-1|CAA03872.1|  150|Anopheles gambiae D7r2 protein protein.    25   4.8  
AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein p...    25   6.4  

>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 26.2 bits (55), Expect = 2.1
 Identities = 13/30 (43%), Positives = 17/30 (56%)

Query: 333 PEGGKLSQYLNNMKINDTIDVRGPSGRLQY 362
           P+G  LS  L ++ IND  +V  P G L Y
Sbjct: 673 PQGCVLSPLLFSLFINDVCNVLPPDGHLLY 702


>AY045760-3|AAK84944.1|  168|Anopheles gambiae D7-related 2 protein
           protein.
          Length = 168

 Score = 25.0 bits (52), Expect = 4.8
 Identities = 10/22 (45%), Positives = 16/22 (72%)

Query: 302 IRAYTPVSSDEDKGYVDLVIKV 323
           +R YTPVSSD+   ++  V++V
Sbjct: 45  LRQYTPVSSDDMDKHMQCVLEV 66


>AJ133853-1|CAB39728.1|  168|Anopheles gambiae D7-related 2 protein
           protein.
          Length = 168

 Score = 25.0 bits (52), Expect = 4.8
 Identities = 10/22 (45%), Positives = 16/22 (72%)

Query: 302 IRAYTPVSSDEDKGYVDLVIKV 323
           +R YTPVSSD+   ++  V++V
Sbjct: 45  LRQYTPVSSDDMDKHMQCVLEV 66


>AJ000036-1|CAA03872.1|  150|Anopheles gambiae D7r2 protein protein.
          Length = 150

 Score = 25.0 bits (52), Expect = 4.8
 Identities = 10/22 (45%), Positives = 16/22 (72%)

Query: 302 IRAYTPVSSDEDKGYVDLVIKV 323
           +R YTPVSSD+   ++  V++V
Sbjct: 45  LRQYTPVSSDDMDKHMQCVLEV 66


>AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein
           protein.
          Length = 499

 Score = 24.6 bits (51), Expect = 6.4
 Identities = 13/33 (39%), Positives = 14/33 (42%)

Query: 25  THCVYLLVKTSQDVSRVAKVPSLGYAETVEAVF 57
           T C     K  Q +     V SLG  ETVE  F
Sbjct: 323 TECESFSGKIQQAIGEAGNVKSLGQMETVEIRF 355


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.325    0.142    0.430 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 532,416
Number of Sequences: 2123
Number of extensions: 22516
Number of successful extensions: 39
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 34
Number of HSP's gapped (non-prelim): 5
length of query: 512
length of database: 516,269
effective HSP length: 67
effective length of query: 445
effective length of database: 374,028
effective search space: 166442460
effective search space used: 166442460
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 50 (24.2 bits)