BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001152-TA|BGIBMGA001152-PA|IPR013057|Amino acid transporter, transmembrane, IPR008333|Oxidoreductase FAD-binding region, IPR001433|Oxidoreductase FAD/NAD(P)-binding, IPR001834|NADH:cytochrome b5 reductase (CBR), IPR001709|Flavoprotein pyridine nucleotide cytochrome reductase (512 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g77760.1 68414.m09053 nitrate reductase 1 (NR1) identical to ... 235 5e-62 At1g37130.1 68414.m04639 nitrate reductase 2 (NR2) identical to ... 227 1e-59 At5g17770.1 68418.m02084 NADH-cytochrome b5 reductase identical ... 163 3e-40 At5g20080.1 68418.m02391 NADH-cytochrome b5 reductase, putative ... 142 5e-34 At3g11900.1 68416.m01459 amino acid transporter family protein l... 56 6e-08 At5g65990.1 68418.m08308 amino acid transporter family protein s... 49 6e-06 At1g30510.3 68414.m03730 ferredoxin--NADP(+) reductase, putative... 44 2e-04 At1g30510.2 68414.m03732 ferredoxin--NADP(+) reductase, putative... 44 2e-04 At1g30510.1 68414.m03731 ferredoxin--NADP(+) reductase, putative... 44 2e-04 At4g05390.1 68417.m00821 ferredoxin--NADP(+) reductase, putative... 42 0.001 At2g39130.1 68415.m04807 amino acid transporter family protein b... 38 0.016 At4g38250.1 68417.m05402 amino acid transporter family protein l... 36 0.064 At2g42005.1 68415.m05196 amino acid transporter family protein l... 35 0.11 At1g15140.1 68414.m01808 oxidoreductase NAD-binding domain-conta... 34 0.20 At5g09220.1 68418.m01045 amino acid permease 2 (AAP2) identical ... 33 0.34 At2g42480.1 68415.m05255 meprin and TRAF homology domain-contain... 33 0.34 At5g63850.1 68418.m08015 amino acid transporter 4, putative (AAP... 33 0.60 At3g28960.1 68416.m03620 amino acid transporter family protein l... 31 1.4 At1g15140.3 68414.m01810 oxidoreductase NAD-binding domain-conta... 31 1.4 At1g15140.2 68414.m01809 oxidoreductase NAD-binding domain-conta... 31 1.4 At5g43040.1 68418.m05254 DC1 domain-containing protein contains ... 31 1.8 At3g56200.1 68416.m06246 amino acid transporter family protein l... 31 1.8 At1g77380.1 68414.m09011 amino acid carrier, putative / amino ac... 31 1.8 At1g44100.1 68414.m05094 amino acid permease 5, putative (AAP5) ... 31 1.8 At1g20020.1 68414.m02507 ferredoxin--NADP(+) reductase, putative... 31 1.8 At5g15240.1 68418.m01785 amino acid transporter family protein l... 30 3.2 At5g64500.1 68418.m08103 membrane protein-related contains weak ... 30 4.2 At3g21520.1 68416.m02715 expressed protein contains Pfam profile... 30 4.2 At3g14770.1 68416.m01867 nodulin MtN3 family protein similar to ... 30 4.2 At4g02680.1 68417.m00363 tetratricopeptide repeat (TPR)-containi... 29 5.6 At3g54830.1 68416.m06074 amino acid transporter family protein b... 29 5.6 At2g41190.1 68415.m05087 amino acid transporter family protein l... 29 5.6 At3g09330.1 68416.m01107 amino acid transporter family protein b... 29 7.4 At4g35180.1 68417.m05001 amino acid transporter family protein s... 29 9.7 >At1g77760.1 68414.m09053 nitrate reductase 1 (NR1) identical to SP|P11832 Nitrate reductase 1 (formerly EC 1.6.6.1) (NR1){Arabidopsis thaliana} Length = 917 Score = 235 bits (575), Expect = 5e-62 Identities = 102/224 (45%), Positives = 157/224 (70%), Gaps = 9/224 (4%) Query: 283 GLPIGQHIHLSAKINDDLVIRAYTPVSSDEDKGYVDLVIKVYFKNVHPKFPEGGKLSQYL 342 GLP+G+H+ + A IND L +RAYTP S+ + G++DLV+KVYFK+VHP+FP GG +SQ+L Sbjct: 692 GLPVGKHVFVCANINDKLCLRAYTPTSAIDAVGHIDLVVKVYFKDVHPRFPNGGLMSQHL 751 Query: 343 NNMKINDTIDVRGPSGRLQYTGNGTFLIKKLRKDPPTKVVVKKLNLIAGGTGIAPMLQLV 402 +++ I ID++GP G ++Y G G FL+ K KKL ++AGGTGI P+ Q++ Sbjct: 752 DSLPIGSMIDIKGPLGHIEYKGKGNFLVSGKPK------FAKKLAMLAGGTGITPIYQII 805 Query: 403 RHICTDVNDRTELKLLFANQSEDDILLRDELERYQREHPSQFQVWYTIDRPTDGWKYSSG 462 + I +D D TE+ +++AN++EDDIL+R+ELE + +H + ++WY ++ +GW YS+G Sbjct: 806 QSILSDPEDETEMYVVYANRTEDDILVREELEGWASKHKERLKIWYVVEIAKEGWSYSTG 865 Query: 463 FINDEMIRDHLFPP--SNDVLVLMCGPPPMINFACNPALDKLGF 504 FI + ++R+H+ P + L L CGPPPMI FA P L+K+G+ Sbjct: 866 FITEAVLREHI-PEGLEGESLALACGPPPMIQFALQPNLEKMGY 908 >At1g37130.1 68414.m04639 nitrate reductase 2 (NR2) identical to SP|P11035 Nitrate reductase 2 (formerly EC 1.6.6.1) (NR2) {Arabidopsis thaliana} Length = 917 Score = 227 bits (556), Expect = 1e-59 Identities = 106/264 (40%), Positives = 170/264 (64%), Gaps = 14/264 (5%) Query: 249 VPMEIVWRNTKDHVAQKYHNITEAVMRAVFAALTGLPIGQHIHLSAKINDDLVIRAYTPV 308 VP+++V + + H +K+ V + GLP+G+HI L A IND L +RAYTP Sbjct: 663 VPVQLVEKTSISHDVRKFR-----FALPVEDMVLGLPVGKHIFLCATINDKLCLRAYTPS 717 Query: 309 SSDEDKGYVDLVIKVYFKNVHPKFPEGGKLSQYLNNMKINDTIDVRGPSGRLQYTGNGTF 368 S+ + GY +LV+K+YF VHP+FP GG +SQYL+++ I T++++GP G ++Y G G+F Sbjct: 718 STVDVVGYFELVVKIYFGGVHPRFPNGGLMSQYLDSLPIGSTLEIKGPLGHVEYLGKGSF 777 Query: 369 LIKKLRKDPPTKVVVKKLNLIAGGTGIAPMLQLVRHICTDVNDRTELKLLFANQSEDDIL 428 + K KL ++AGGTGI P+ Q+++ I D D TE+ +++AN++E+DIL Sbjct: 778 TVHGKPK------FADKLAMLAGGTGITPVYQIIQAILKDPEDETEMYVIYANRTEEDIL 831 Query: 429 LRDELERYQREHPSQFQVWYTIDRPTDGWKYSSGFINDEMIRDHLFPPSND--VLVLMCG 486 LR+EL+ + ++P + +VWY ++ +GW YS+GFI++ ++R+H+ P D L + CG Sbjct: 832 LREELDGWAEQYPDRLKVWYVVESAKEGWAYSTGFISEAIMREHI-PDGLDGSALAMACG 890 Query: 487 PPPMINFACNPALDKLGFKPDQRF 510 PPPMI FA P L+K+ + + F Sbjct: 891 PPPMIQFAVQPNLEKMQYNIKEDF 914 >At5g17770.1 68418.m02084 NADH-cytochrome b5 reductase identical to NADH-cytochrome b5 reductase [Arabidopsis thaliana] GI:4240116 Length = 281 Score = 163 bits (395), Expect = 3e-40 Identities = 93/262 (35%), Positives = 147/262 (56%), Gaps = 32/262 (12%) Query: 257 NTKDHVAQKYHNITEAVMRAVF-----AALTGLPIGQHIHLSAKIND-DLVIRAYTPVSS 310 N K+ K H ++ V + VF ++ GLPIGQHI K + VI+ YTP + Sbjct: 46 NFKEFKLVKRHQLSHNVAKFVFELPTSTSVLGLPIGQHISCRGKDGQGEDVIKPYTPTTL 105 Query: 311 DEDKGYVDLVIKVYFKNVHPKFPEGGKLSQYLNNMKINDTIDVRGPSGRLQYTGNGTFLI 370 D D G +LVIK+Y P+G ++S + M++ D + V+GP GR +Y G F Sbjct: 106 DSDVGRFELVIKMY--------PQG-RMSHHFREMRVGDHLAVKGPKGRFKYQP-GQF-- 153 Query: 371 KKLRKDPPTKVVVKKLNLIAGGTGIAPMLQLVRHICTDVNDRTELKLLFANQSEDDILLR 430 + ++AGG+GI PM Q+ R I + D+T++ L++AN + DDILL+ Sbjct: 154 -------------RAFGMLAGGSGITPMFQVARAILENPTDKTKVHLIYANVTYDDILLK 200 Query: 431 DELERYQREHPSQFQVWYTIDRPTDGWKYSSGFINDEMIRDHLFPPSNDVLVLMCGPPPM 490 +ELE +P QF+++Y +++P + W GF++ EMI+ H P++D+ +L CGPPPM Sbjct: 201 EELEGLTTNYPEQFKIFYVLNQPPEVWDGGVGFVSKEMIQTHCPAPASDIQILRCGPPPM 260 Query: 491 INFACNPALDKLGFKPDQRFAY 512 N A L+ LG+ P+ +F + Sbjct: 261 -NKAMAANLEALGYSPEMQFQF 281 >At5g20080.1 68418.m02391 NADH-cytochrome b5 reductase, putative similar to SP|P36060 NADH-cytochrome b5 reductase precursor (EC 1.6.2.2) {Saccharomyces cerevisiae}; contains Pfam profiles PF00175: Oxidoreductase NAD-binding domain, PF00970: oxidoreductase, FAD-binding Length = 328 Score = 142 bits (344), Expect = 5e-34 Identities = 82/211 (38%), Positives = 123/211 (58%), Gaps = 30/211 (14%) Query: 281 LTGLPIGQHIHLSAKINDDLVIRAYTPVSSDEDKGYVDLVIKVYFKNVHPKFPEGGKLSQ 340 LT P+G + K VIR YTP+S E KGY DL+IKVY P+G K+SQ Sbjct: 115 LTRAPLGYNAEGKTKY----VIRPYTPISDPEAKGYFDLLIKVY--------PDG-KMSQ 161 Query: 341 YLNNMKINDTIDVRGPSGRLQYTGNGTFLIKKLRKDPPTKVVVKKLNLIAGGTGIAPMLQ 400 + ++K D ++V+GP + +Y+ N + K + +IAGG+GI PMLQ Sbjct: 162 HFASLKPGDVLEVKGPVEKFKYSPN----------------MKKHIGMIAGGSGITPMLQ 205 Query: 401 LVRHICTDVNDRTELKLLFANQSEDDILLRDELERYQREHPSQFQVWYTIDRPTDGWKYS 460 ++ I + D T++ LL+AN S DDILL+ +L+ Q HP+ +++YT+D PT WK Sbjct: 206 VIDAIVKNPEDNTQISLLYANVSPDDILLKQKLDVLQANHPN-LKIFYTVDNPTKNWKGG 264 Query: 461 SGFINDEMIRDHLFPPSNDVLVLMCGPPPMI 491 G+I+ +M L P++D L+L+CGPP M+ Sbjct: 265 VGYISKDMALKGLPLPTDDTLILVCGPPGMM 295 >At3g11900.1 68416.m01459 amino acid transporter family protein low similarity to proton/amino acid transporter 1 [Mus musculus] GI:21908024; belongs to INTERPRO:IPR002422 amino acid/polyamine transporter, family II Length = 432 Score = 56.0 bits (129), Expect = 6e-08 Identities = 64/253 (25%), Positives = 113/253 (44%), Gaps = 48/253 (18%) Query: 1 MPAAFKNAGTIVGIFGTIILGYICTHCVYLLVKTSQDV-SRVAKVPSLGYAETVEAVFAT 59 +P AF+ AG + G G II+G+ +C+ LL++ + S + S Y + T Sbjct: 52 LPYAFRIAGWLAGSLGVIIVGFATYYCMLLLIQCRDKLESEEGEEESKTYGDLGFKCMGT 111 Query: 60 GPQTLRKFSRASRIFIDWAMAFTI-LGACAVYVILLVESVQQIVDYFYADNGINETMYCL 118 + L +F + FT G Y++ + ++ I ++ G++ + + Sbjct: 112 KGRYLTEF-----------LIFTAQCGGSVAYLVFIGRNLSSI----FSSYGLSMVSF-I 155 Query: 119 MFLVPILI-FTQIENLKYLAPFSGFANI--LLVLTFLI---CLYYICNEFPDLDSRPTSV 172 + LVPI + + I +L L+PFS FA+I ++ + F++ I +F D S Sbjct: 156 LILVPIEVGLSWITSLSALSPFSIFADICNIIAMCFVVKENVEMVIEGDFSFSDRTAISS 215 Query: 173 NIGNLPLFIGLS----GGTELTMSV--------------------VVLLYMIMGFLGYVK 208 IG LP G++ G +T+++ + +Y++ GF GY+ Sbjct: 216 TIGGLPFAGGVAVFCFEGFAMTLALESSMREREAFPKLLAKVLAGITFVYVLFGFCGYMA 275 Query: 209 YGDQAMGSITLNL 221 YGDQ ITLNL Sbjct: 276 YGDQTKDIITLNL 288 >At5g65990.1 68418.m08308 amino acid transporter family protein similar to proton/amino acid transporter 1 [Mus musculus] GI:21908024; contains Pfam profile PF01490: Transmembrane amino acid transporter protein Length = 427 Score = 49.2 bits (112), Expect = 6e-06 Identities = 61/254 (24%), Positives = 107/254 (42%), Gaps = 42/254 (16%) Query: 1 MPAAFKNAGTIVGIFGTIILGYICTHCVYLLVKTSQDVSRVAKVPSL-GYAETVEAVFAT 59 +P FK G ++G+ + + + C+ LLV T + + ++ S+ + + E+V Sbjct: 59 LPYTFKKTGWLLGLLTLLFVSSLTFFCMMLLVHTRRKLESLSGFNSITSFGDLGESV--C 116 Query: 60 GPQTLRKFSRASRIFIDWAMAFTILGACAVYVILLVESVQQIVDYFYAD-NGINETMYCL 118 GP A R+ +D + + G C Y+I + ++ ++ G++ L Sbjct: 117 GP--------AGRLVVDVMLVLSQSGFCVSYLIFVATTMANLLSRGTEHILGLDAASIYL 168 Query: 119 MFLVPI-LIFTQIENLKYLAPFSGFANILLVLTFLICLYYICNEFPDLDSRPTSVNIGNL 177 P L I +L +LAP S FA+I+ V L+ + + + F L RP G + Sbjct: 169 WGCFPFQLGLNSIPSLTHLAPLSIFADIVDVAATLVVM--VQDVFIFLKRRPPLRVFGGV 226 Query: 178 PLF-------------IGLSGGTEL--------------TMSVVVLLYMIMGFLGYVKYG 210 +F IG+ EL M ++ ++Y G LGY+ YG Sbjct: 227 SVFFYGLGVAVYAFEGIGMVLPLELEAKYKDKFGRALGLAMGLISIMYGAFGLLGYMAYG 286 Query: 211 DQAMGSITLNLDTG 224 ++ IT NL TG Sbjct: 287 EETKDIITTNLGTG 300 >At1g30510.3 68414.m03730 ferredoxin--NADP(+) reductase, putative / adrenodoxin reductase, putative strong similarity to SP|P41345 Ferredoxin--NADP reductase, root isozyme, chloroplast precursor (EC 1.18.1.2) (FNR) {Oryza sativa}, ferredoxin-NADP reductase precursor [Zea mays] GI:500751 Length = 317 Score = 44.0 bits (99), Expect = 2e-04 Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 13/161 (8%) Query: 333 PEGGKLSQYLNNMKINDTIDVRGPSGRLQYTGNGTFLIKKLRKDPPTKVVVKKLNLIAGG 392 PE GK N + N D + P ++Q TG ++ DP + +IA G Sbjct: 122 PETGKEDPSKNGVCSNFLCDSK-PGDKIQITGPSGKVMLLPESDPNATHI-----MIATG 175 Query: 393 TGIAPMLQLVRHI-CTDVNDRT--ELKLLFANQSEDDILLRD-ELERYQREHPSQFQVWY 448 TG+AP +R + +V ++T L LF + D LL D E +Y ++HP F+ Sbjct: 176 TGVAPYRGYLRRMFMENVPNKTFSGLAWLFLGVANTDSLLYDEEFTKYLKDHPDNFRFDK 235 Query: 449 TIDRPTDGWKYSSGFIND--EMIRDHLFP-PSNDVLVLMCG 486 + R K ++ D E D +F N + CG Sbjct: 236 ALSREEKNKKGGKMYVQDKIEEYSDEIFKLLDNGAHIYFCG 276 >At1g30510.2 68414.m03732 ferredoxin--NADP(+) reductase, putative / adrenodoxin reductase, putative strong similarity to SP|P41345 Ferredoxin--NADP reductase, root isozyme, chloroplast precursor (EC 1.18.1.2) (FNR) {Oryza sativa}, ferredoxin-NADP reductase precursor [Zea mays] GI:500751 Length = 382 Score = 44.0 bits (99), Expect = 2e-04 Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 13/161 (8%) Query: 333 PEGGKLSQYLNNMKINDTIDVRGPSGRLQYTGNGTFLIKKLRKDPPTKVVVKKLNLIAGG 392 PE GK N + N D + P ++Q TG ++ DP + +IA G Sbjct: 187 PETGKEDPSKNGVCSNFLCDSK-PGDKIQITGPSGKVMLLPESDPNATHI-----MIATG 240 Query: 393 TGIAPMLQLVRHI-CTDVNDRT--ELKLLFANQSEDDILLRD-ELERYQREHPSQFQVWY 448 TG+AP +R + +V ++T L LF + D LL D E +Y ++HP F+ Sbjct: 241 TGVAPYRGYLRRMFMENVPNKTFSGLAWLFLGVANTDSLLYDEEFTKYLKDHPDNFRFDK 300 Query: 449 TIDRPTDGWKYSSGFIND--EMIRDHLFP-PSNDVLVLMCG 486 + R K ++ D E D +F N + CG Sbjct: 301 ALSREEKNKKGGKMYVQDKIEEYSDEIFKLLDNGAHIYFCG 341 >At1g30510.1 68414.m03731 ferredoxin--NADP(+) reductase, putative / adrenodoxin reductase, putative strong similarity to SP|P41345 Ferredoxin--NADP reductase, root isozyme, chloroplast precursor (EC 1.18.1.2) (FNR) {Oryza sativa}, ferredoxin-NADP reductase precursor [Zea mays] GI:500751 Length = 381 Score = 44.0 bits (99), Expect = 2e-04 Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 13/161 (8%) Query: 333 PEGGKLSQYLNNMKINDTIDVRGPSGRLQYTGNGTFLIKKLRKDPPTKVVVKKLNLIAGG 392 PE GK N + N D + P ++Q TG ++ DP + +IA G Sbjct: 186 PETGKEDPSKNGVCSNFLCDSK-PGDKIQITGPSGKVMLLPESDPNATHI-----MIATG 239 Query: 393 TGIAPMLQLVRHI-CTDVNDRT--ELKLLFANQSEDDILLRD-ELERYQREHPSQFQVWY 448 TG+AP +R + +V ++T L LF + D LL D E +Y ++HP F+ Sbjct: 240 TGVAPYRGYLRRMFMENVPNKTFSGLAWLFLGVANTDSLLYDEEFTKYLKDHPDNFRFDK 299 Query: 449 TIDRPTDGWKYSSGFIND--EMIRDHLFP-PSNDVLVLMCG 486 + R K ++ D E D +F N + CG Sbjct: 300 ALSREEKNKKGGKMYVQDKIEEYSDEIFKLLDNGAHIYFCG 340 >At4g05390.1 68417.m00821 ferredoxin--NADP(+) reductase, putative / adrenodoxin reductase, putative strong similarity to SP|P41345 Ferredoxin--NADP reductase, root isozyme, chloroplast precursor (EC 1.18.1.2) (FNR) {Oryza sativa}, ferredoxin-NADP reductase precursor [Zea mays] GI:500751 Length = 378 Score = 41.5 bits (93), Expect = 0.001 Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 21/160 (13%) Query: 334 EGGKLSQYLNNMKINDTIDVRGPSGRLQYTGNGTFLIKKLRKDPPTKVVVKKLNLIAGGT 393 + G S +L N K D + + GPSG+ + L +D P + +IA GT Sbjct: 192 KAGVCSNFLCNAKPGDKVKITGPSGK----------VMLLPEDDPKATHI----MIATGT 237 Query: 394 GIAPMLQLVRHICTD--VNDRTE-LKLLFANQSEDDILLRD-ELERYQREHPSQFQVWYT 449 G+AP +R + + N + + L LF + D LL D E Y++++P F+ Sbjct: 238 GVAPYRGYLRRMFMENVPNFKFDGLAWLFLGVANSDSLLYDEEFAGYRKDYPENFRYDKA 297 Query: 450 IDRPTDGWKYSSGFIND--EMIRDHLFP-PSNDVLVLMCG 486 + R K ++ D E D +F N + CG Sbjct: 298 LSREEKNKKGGKMYVQDKIEEYSDEIFKLLDNGAHIYFCG 337 >At2g39130.1 68415.m04807 amino acid transporter family protein belongs to INTERPRO:IPR002422 amino acid/polyamine transporter, family II Length = 550 Score = 37.9 bits (84), Expect = 0.016 Identities = 29/127 (22%), Positives = 58/127 (45%), Gaps = 12/127 (9%) Query: 67 FSRASRIFIDWAMAFTILGACAVYVILLVESVQQI-------VDYFYADNGINETMYCLM 119 F RIF+ + + C Y+IL +++ + + F D + + Sbjct: 231 FGTTGRIFVSIVLYLELYACCVEYIILESDNLSSLYPNAALSIGGFQLDARHLFALLTTL 290 Query: 120 FLVPILIFTQIENLKYLAPFSGFANILLVLTFLICLYYI-CNEFPDLDSRPTSVNIGNLP 178 ++P + + L Y++ A++L+VL CL++I + + S+ T++N+ LP Sbjct: 291 AVLPTVWLRDLSVLSYISAGGVIASVLVVL----CLFWIGLVDEVGIHSKGTTLNLSTLP 346 Query: 179 LFIGLSG 185 + IGL G Sbjct: 347 VAIGLYG 353 >At4g38250.1 68417.m05402 amino acid transporter family protein low similarity to lysosomal amino acid transporter 1 [Rattus norvegicus] GI:14571904; contains Pfam profile PF01490: Transmembrane amino acid transporter protein Length = 436 Score = 35.9 bits (79), Expect = 0.064 Identities = 15/36 (41%), Positives = 21/36 (58%) Query: 189 LTMSVVVLLYMIMGFLGYVKYGDQAMGSITLNLDTG 224 L M + L+Y+ G LGY+ +G+ M IT NL G Sbjct: 274 LGMGFISLIYIAFGILGYLAFGEDTMDIITANLGAG 309 Score = 33.9 bits (74), Expect = 0.26 Identities = 40/195 (20%), Positives = 77/195 (39%), Gaps = 24/195 (12%) Query: 1 MPAAFKNAGTIVGIFGTIILGYICTHCVYLLVKTSQDVSRVAKVPSLGYAETVEAVFATG 60 +P AFK G ++G+ + + + HC+ LLV T + + + + + + G Sbjct: 55 LPYAFKRTGWLMGVLLLVSVSVLTHHCMMLLVYTRRKLD--------SFNAGISKIGSFG 106 Query: 61 PQTLRKFSRASRIFIDWAMAFTILGACAVYVILLVESVQQIVDYFYADN----------- 109 RI +D + + G C Y+I + ++ + D + Sbjct: 107 DLGFAVCGSLGRIVVDLFIILSQAGFCVGYLIFIGTTLANLSDPESPTSLRHQFTRLGSE 166 Query: 110 --GINETMYCLMFLVPI-LIFTQIENLKYLAPFSGFANILLVLTFLICLYYICNEFPDLD 166 G++ + P L I+ L +LAP S FA+I+ + + + + + L Sbjct: 167 FLGVSSKSLYIWGCFPFQLGLNSIKTLTHLAPLSIFADIVDLGAMAVVI--VEDSMIILK 224 Query: 167 SRPTSVNIGNLPLFI 181 RP V G + LF+ Sbjct: 225 QRPDVVAFGGMSLFL 239 >At2g42005.1 68415.m05196 amino acid transporter family protein low similarity to proton/amino acid transporter 1 [Mus musculus] GI:21908024; contains Pfam profile PF01490: Transmembrane amino acid transporter protein Length = 413 Score = 35.1 bits (77), Expect = 0.11 Identities = 15/36 (41%), Positives = 21/36 (58%) Query: 189 LTMSVVVLLYMIMGFLGYVKYGDQAMGSITLNLDTG 224 L+M + ++Y G LGY+ +GD M IT NL G Sbjct: 253 LSMLFIAVMYGSFGVLGYMAFGDDTMDIITANLGAG 288 Score = 32.7 bits (71), Expect = 0.60 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%) Query: 1 MPAAFKNAGTIVGIFGTIILGYICTHCVYLLV--KTSQDVSRVAKVPSLGYA 50 +P AFK G ++G+ + + HC+ LLV + VS + LG+A Sbjct: 44 LPYAFKRTGWLMGLLTLFSVAALINHCMMLLVHIRRKLGVSNIGSFGDLGFA 95 >At1g15140.1 68414.m01808 oxidoreductase NAD-binding domain-containing protein Contains Pfam profile PF00175: Oxidoreductase NAD-binding domain; ESTs gb|H76345 and gb|AA651465 come from this gene Length = 295 Score = 34.3 bits (75), Expect = 0.20 Identities = 31/155 (20%), Positives = 71/155 (45%), Gaps = 15/155 (9%) Query: 336 GKLSQYLNNMKINDTIDVRGPSGRLQYTGNGTFLIKKLRKDPPTKVVVKKLNLIAGGTGI 395 G ++ L +K +T+++ GNG F I + DPP + + + A G+GI Sbjct: 134 GSTAEILCGLKKGETVELSS------VMGNG-FNIDLI--DPPEEYPT--VLIFATGSGI 182 Query: 396 APMLQLVRHICTDVNDRTELKLLFANQSEDDILLRDELERYQREHPSQFQVWYTIDRPTD 455 +P+ L+ + R++++L + ++ + + +++ + ++ + +V + +P D Sbjct: 183 SPIRSLIES-GFGADRRSDVRLYYGARNLNRMAYQEKFKEWES---AGVKVVPVLSQPDD 238 Query: 456 GWKYSSGFINDEMIRDHLFPPSNDVLVLMCGPPPM 490 GWK +G++ R ++CG M Sbjct: 239 GWKGETGYVQAAFARAKQLSAPKATGAVLCGQKQM 273 >At5g09220.1 68418.m01045 amino acid permease 2 (AAP2) identical to amine acid permease AAP2 [Arabidopsis thaliana] GI:510236 Length = 493 Score = 33.5 bits (73), Expect = 0.34 Identities = 11/31 (35%), Positives = 22/31 (70%) Query: 187 TELTMSVVVLLYMIMGFLGYVKYGDQAMGSI 217 T+++++V + YM+ G +GY +GD A G++ Sbjct: 292 TKISIAVTTIFYMLCGSMGYAAFGDAAPGNL 322 >At2g42480.1 68415.m05255 meprin and TRAF homology domain-containing protein / MATH domain-containing protein similar to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain Length = 743 Score = 33.5 bits (73), Expect = 0.34 Identities = 28/131 (21%), Positives = 60/131 (45%), Gaps = 8/131 (6%) Query: 302 IRAYTPVSSDEDKGYVD---LVIKVYFKNVHPKFPEGGKLSQYLNNMKINDTIDVRGPSG 358 IR P+S E+KG+++ L+++VY KN EGG +S+ + + I + + Sbjct: 105 IRKALPLSKFEEKGFLEKDKLIVEVYIKNFEAVDGEGGGVSKKEEEETV-EIIGSQDYAS 163 Query: 359 RLQYTGNGTFLIKKLRKDPPTKVVVKKLNLIAGGTGIAPMLQLVRHICTDVNDRTELKLL 418 + + G+ T + K + P K N + + ++R+ V++ E+K+ Sbjct: 164 QASFKGSVTLVRKIFAEHPEIAEEFKPKNQVFK----KEYMNILRNAYRKVSELAEVKMD 219 Query: 419 FANQSEDDILL 429 + +++ L Sbjct: 220 WVKSKIEEVSL 230 >At5g63850.1 68418.m08015 amino acid transporter 4, putative (AAP4) identical to amino acid transporter GI:608671 from [Arabidopsis thaliana]; Length = 466 Score = 32.7 bits (71), Expect = 0.60 Identities = 11/31 (35%), Positives = 21/31 (67%) Query: 187 TELTMSVVVLLYMIMGFLGYVKYGDQAMGSI 217 T ++++V YM+ G +GY +GD+A G++ Sbjct: 265 TRISIAVTTTFYMLCGCMGYAAFGDKAPGNL 295 >At3g28960.1 68416.m03620 amino acid transporter family protein low similarity to vesicular inhibitory amino acid transporter [Mus musculus] GI:2826776; contains INTERPRO:IPR002422 amino acid/polyamine transporter, family II Length = 405 Score = 31.5 bits (68), Expect = 1.4 Identities = 13/24 (54%), Positives = 15/24 (62%) Query: 198 YMIMGFLGYVKYGDQAMGSITLNL 221 Y M LGY+ YG Q + ITLNL Sbjct: 246 YTSMAVLGYLMYGSQTLSQITLNL 269 >At1g15140.3 68414.m01810 oxidoreductase NAD-binding domain-containing protein Contains Pfam profile PF00175: Oxidoreductase NAD-binding domain; ESTs gb|H76345 and gb|AA651465 come from this gene Length = 271 Score = 31.5 bits (68), Expect = 1.4 Identities = 27/129 (20%), Positives = 65/129 (50%), Gaps = 15/129 (11%) Query: 336 GKLSQYLNNMKINDTIDVRGPSGRLQYTGNGTFLIKKLRKDPPTKVVVKKLNLIAGGTGI 395 G ++ L +K +T+++ GNG F I + DPP + + + A G+GI Sbjct: 134 GSTAEILCGLKKGETVELSS------VMGNG-FNIDLI--DPPEEYPT--VLIFATGSGI 182 Query: 396 APMLQLVRHICTDVNDRTELKLLFANQSEDDILLRDELERYQREHPSQFQVWYTIDRPTD 455 +P+ L+ + R++++L + ++ + + +++ + ++ + +V + +P D Sbjct: 183 SPIRSLIES-GFGADRRSDVRLYYGARNLNRMAYQEKFKEWES---AGVKVVPVLSQPDD 238 Query: 456 GWKYSSGFI 464 GWK +G++ Sbjct: 239 GWKGETGYV 247 >At1g15140.2 68414.m01809 oxidoreductase NAD-binding domain-containing protein Contains Pfam profile PF00175: Oxidoreductase NAD-binding domain; ESTs gb|H76345 and gb|AA651465 come from this gene Length = 271 Score = 31.5 bits (68), Expect = 1.4 Identities = 27/129 (20%), Positives = 65/129 (50%), Gaps = 15/129 (11%) Query: 336 GKLSQYLNNMKINDTIDVRGPSGRLQYTGNGTFLIKKLRKDPPTKVVVKKLNLIAGGTGI 395 G ++ L +K +T+++ GNG F I + DPP + + + A G+GI Sbjct: 134 GSTAEILCGLKKGETVELSS------VMGNG-FNIDLI--DPPEEYPT--VLIFATGSGI 182 Query: 396 APMLQLVRHICTDVNDRTELKLLFANQSEDDILLRDELERYQREHPSQFQVWYTIDRPTD 455 +P+ L+ + R++++L + ++ + + +++ + ++ + +V + +P D Sbjct: 183 SPIRSLIES-GFGADRRSDVRLYYGARNLNRMAYQEKFKEWES---AGVKVVPVLSQPDD 238 Query: 456 GWKYSSGFI 464 GWK +G++ Sbjct: 239 GWKGETGYV 247 >At5g43040.1 68418.m05254 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain Length = 551 Score = 31.1 bits (67), Expect = 1.8 Identities = 13/34 (38%), Positives = 22/34 (64%) Query: 22 YICTHCVYLLVKTSQDVSRVAKVPSLGYAETVEA 55 YICTHC ++L +T ++S+ + PS+ T+ A Sbjct: 292 YICTHCDFILHETCANLSKKKRHPSVSRQLTLYA 325 >At3g56200.1 68416.m06246 amino acid transporter family protein low similarity to N system amino acids transporter NAT-1 [Mus musculus] GI:7406950; belongs to INTERPRO:IPR002422 amino acid/polyamine transporter, family II Length = 435 Score = 31.1 bits (67), Expect = 1.8 Identities = 11/36 (30%), Positives = 20/36 (55%) Query: 187 TELTMSVVVLLYMIMGFLGYVKYGDQAMGSITLNLD 222 T++++ + +Y G GY+ +GD M I +N D Sbjct: 258 TKISVILCAAIYFATGLFGYLLFGDATMSDILVNFD 293 >At1g77380.1 68414.m09011 amino acid carrier, putative / amino acid permease, putative strong similarity to amino acid carrier GI:3293031 from [Ricinus communis]; contains Pfam profile PF01490: Transmembrane amino acid transporter protein; identical to cDNA AAP3 (Amino Acid Permease) GI:3970651 Length = 476 Score = 31.1 bits (67), Expect = 1.8 Identities = 11/31 (35%), Positives = 21/31 (67%) Query: 187 TELTMSVVVLLYMIMGFLGYVKYGDQAMGSI 217 T +++SV + YM+ G +GY +GD + G++ Sbjct: 276 TLVSVSVTTMFYMLCGCMGYAAFGDLSPGNL 306 >At1g44100.1 68414.m05094 amino acid permease 5, putative (AAP5) nearly identical to amino acid permease (AAP5) GI:608673 from [Arabidopsis thaliana] Length = 480 Score = 31.1 bits (67), Expect = 1.8 Identities = 11/31 (35%), Positives = 21/31 (67%) Query: 187 TELTMSVVVLLYMIMGFLGYVKYGDQAMGSI 217 T ++++V + YM+ G +GY +GD A G++ Sbjct: 280 TFVSVAVTTVFYMLCGCVGYAAFGDNAPGNL 310 >At1g20020.1 68414.m02507 ferredoxin--NADP(+) reductase, putative / adrenodoxin reductase, putative strong similarity to Ferredoxin--NADP reductase, chloroplast precursor (EC 1.18.1.2) (FNR) from {Pisum sativum} SP|P10933, {Mesembryanthemum crystallinum} SP|P41343, {Spinacia oleracea} SP|P00455, [Capsicum annuum] GI:6899972 Length = 369 Score = 31.1 bits (67), Expect = 1.8 Identities = 24/98 (24%), Positives = 42/98 (42%), Gaps = 9/98 (9%) Query: 375 KDPPTKVVVKKLNLIAGGTGIAPMLQLVRHICTDVNDRTELK----LLFANQSEDDILLR 430 KDP V+ ++A GTGIAP + + + +D + L + +L + Sbjct: 214 KDPNATVI-----MLATGTGIAPFRSFLWKMFFEKHDDYKFNGLAWLFLGVPTTSSLLYQ 268 Query: 431 DELERYQREHPSQFQVWYTIDRPTDGWKYSSGFINDEM 468 +E ++ + + P F+V Y I R K +I M Sbjct: 269 EEFDKMKAKAPENFRVDYAISREQANDKGEKMYIQTRM 306 >At5g15240.1 68418.m01785 amino acid transporter family protein low similarity to amino acid transporter system A3 [Homo sapiens] GI:13876616; belongs to INTERPRO:IPR002422 amino acid/polyamine transporter, family II Length = 423 Score = 30.3 bits (65), Expect = 3.2 Identities = 12/35 (34%), Positives = 18/35 (51%) Query: 189 LTMSVVVLLYMIMGFLGYVKYGDQAMGSITLNLDT 223 + ++ +Y + LGY+ YG ITLNL T Sbjct: 255 ICFTICTFIYASVAVLGYLMYGSDVESQITLNLPT 289 >At5g64500.1 68418.m08103 membrane protein-related contains weak similarity to spinster type IV (GI:12003976) [Drosophila melanogaster] Length = 484 Score = 29.9 bits (64), Expect = 4.2 Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 3/80 (3%) Query: 133 LKYLAPFSGFANILL---VLTFLICLYYICNEFPDLDSRPTSVNIGNLPLFIGLSGGTEL 189 L + A F G A ++L VL F+I ++ PD +P + N+ LP+ G S + Sbjct: 205 LPWRAAFWGEAILMLPFAVLGFVIKPLHLKGFAPDDTGKPRTDNLNVLPVGYGFSAVMKD 264 Query: 190 TMSVVVLLYMIMGFLGYVKY 209 ++V + LGY+ Y Sbjct: 265 LKLLLVDKVYVTNILGYIAY 284 >At3g21520.1 68416.m02715 expressed protein contains Pfam profile PF05078: Protein of unknown function (DUF679) Length = 207 Score = 29.9 bits (64), Expect = 4.2 Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 2/57 (3%) Query: 3 AAFKNAGTIVGIFGTIILGYICT-HCVYLLVKTSQDVSRVAKVPSLGYAE-TVEAVF 57 A F +AG ++ +FGT++L T C Y + +Q +A P++G A T+ A+F Sbjct: 122 ADFVHAGFVLAVFGTLVLLDANTASCFYPRFRETQKTLVMALPPAVGVASATIFALF 178 >At3g14770.1 68416.m01867 nodulin MtN3 family protein similar to MtN3 GI:1619602 (root nodule development) from [Medicago truncatula] Length = 236 Score = 29.9 bits (64), Expect = 4.2 Identities = 15/39 (38%), Positives = 21/39 (53%) Query: 119 MFLVPILIFTQIENLKYLAPFSGFANILLVLTFLICLYY 157 +F+ P+ F +I K FSG I +L LICL+Y Sbjct: 28 LFVSPMPTFRRIMRNKSTEQFSGLPYIYALLNCLICLWY 66 >At4g02680.1 68417.m00363 tetratricopeptide repeat (TPR)-containing protein contains Pfam profile PF00515 TPR Domain Length = 888 Score = 29.5 bits (63), Expect = 5.6 Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 2/67 (2%) Query: 7 NAGTIVGIFGTIILGYICTHCVYLLVKTSQDVSRVAKVPSLGYAETVEAVFATGPQTLRK 66 N G + G LGYI H ++ K S +S V+ P LG+ + + G + L Sbjct: 409 NLGHVYSATGLARLGYIQGHRLWAYEKLSSVISSVS--PPLGWMYQERSFYCEGDKKLED 466 Query: 67 FSRASRI 73 +A+ + Sbjct: 467 LEKATEL 473 >At3g54830.1 68416.m06074 amino acid transporter family protein belongs to INTERPRO:IPR002422 amino acid/polyamine transporter, family II Length = 546 Score = 29.5 bits (63), Expect = 5.6 Identities = 25/127 (19%), Positives = 56/127 (44%), Gaps = 12/127 (9%) Query: 67 FSRASRIFIDWAMAFTILGACAVYVILLVESVQQI-------VDYFYADNGINETMYCLM 119 F RI + + + Y+IL +++ + + F+ D + + Sbjct: 221 FGSTGRILVSVILYMELYAMSVEYIILEGDNLSSMFPNASLSIGGFHLDAPRLFALLTTL 280 Query: 120 FLVPILIFTQIENLKYLAPFSGFANILLVLTFLICLYYI-CNEFPDLDSRPTSVNIGNLP 178 ++P + + L Y++ A++L+VL CL+++ + + S+ T +N+ LP Sbjct: 281 AVLPTVWLRDLSVLSYISAGGVIASVLVVL----CLFWVGLVDDVGIHSKGTPLNLATLP 336 Query: 179 LFIGLSG 185 + +GL G Sbjct: 337 VSVGLYG 343 >At2g41190.1 68415.m05087 amino acid transporter family protein low similarity to vesicular GABA transporter [Rattus norvegicus] GI:2587061; belongs to INTERPRO:IPR002422 amino acid/polyamine transporter, family II Length = 536 Score = 29.5 bits (63), Expect = 5.6 Identities = 11/29 (37%), Positives = 19/29 (65%) Query: 193 VVVLLYMIMGFLGYVKYGDQAMGSITLNL 221 + VLLY + +GY+ +G+ + ITLN+ Sbjct: 372 ICVLLYGGVAIMGYLMFGEATLSQITLNM 400 >At3g09330.1 68416.m01107 amino acid transporter family protein belongs to INTERPRO:IPR002422 amino acid/polyamine transporter, family II Length = 524 Score = 29.1 bits (62), Expect = 7.4 Identities = 25/127 (19%), Positives = 58/127 (45%), Gaps = 12/127 (9%) Query: 67 FSRASRIFIDWAMAFTILGACAVYVILLVESVQQIVDYFYADN-GINE------TMYCLM 119 F R+ I + + C Y+I++ +++ ++ + G++ + + Sbjct: 205 FGFTGRLIISILLYMELYVCCVEYIIMMSDNLSRVFPNITLNIVGVSLDSPQIFAISATL 264 Query: 120 FLVPILIFTQIENLKYLAPFSGFANILLVLTFLICLYYICN-EFPDLDSRPTSVNIGNLP 178 ++P + + L YL+ F +ILL L CL+++ + + + S+++ NLP Sbjct: 265 IVLPTVWLKDLSLLSYLSAGGVFVSILLAL----CLFWVGSVDGVGFHTGGKSLDLANLP 320 Query: 179 LFIGLSG 185 + IG+ G Sbjct: 321 VAIGIFG 327 >At4g35180.1 68417.m05001 amino acid transporter family protein similar to amino acid permease 1 GI:976402 from [Nicotiana sylvestris]; contains Pfam profile PF01490: Transmembrane amino acid transporter protein Length = 456 Score = 28.7 bits (61), Expect = 9.7 Identities = 41/138 (29%), Positives = 59/138 (42%), Gaps = 14/138 (10%) Query: 1 MPAAFKNAGTIVGIFGTIILGYICTHCVYLLVKTSQDVSRVAKVPSLGYAETVEAVFATG 60 +PAAF G + +GTIIL V+ L T V VP + + V A+ Sbjct: 59 LPAAFAALGWV---WGTIIL---TVGFVWKLYTTWLLVQLHEAVPGIRISRYVRLAIASF 112 Query: 61 PQTLRKFSRASRIFIDWAMAFTILGACAVYVILLVESVQQIVDYFYADNGINET-MYC-L 118 L K IF + + GAC + VI +S+QQ++ DN T + C L Sbjct: 113 GVKLGKLLG---IF---PVMYLSGGACTILVITGGKSIQQLLQIMSDDNTAPLTSVQCFL 166 Query: 119 MFLVPILIFTQIENLKYL 136 +F +I +Q NL L Sbjct: 167 VFSCIAMIMSQFPNLNSL 184 Database: arabidopsis Posted date: Oct 3, 2007 3:31 PM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.325 0.142 0.430 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,078,276 Number of Sequences: 28952 Number of extensions: 519925 Number of successful extensions: 1525 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 19 Number of HSP's successfully gapped in prelim test: 15 Number of HSP's that attempted gapping in prelim test: 1479 Number of HSP's gapped (non-prelim): 50 length of query: 512 length of database: 12,070,560 effective HSP length: 84 effective length of query: 428 effective length of database: 9,638,592 effective search space: 4125317376 effective search space used: 4125317376 T: 11 A: 40 X1: 15 ( 7.0 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 40 (21.6 bits) S2: 61 (28.7 bits)
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