Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001151-TA|BGIBMGA001151-PA|IPR013057|Amino acid
transporter, transmembrane
(253 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF025468-4|AAB71045.1| 449|Caenorhabditis elegans Hypothetical ... 159 1e-39
AL021481-5|CAA16336.2| 455|Caenorhabditis elegans Hypothetical ... 157 5e-39
U28928-5|AAQ01535.1| 434|Caenorhabditis elegans Hypothetical pr... 124 8e-29
U28928-4|AAA68337.2| 489|Caenorhabditis elegans Hypothetical pr... 124 8e-29
Z97191-2|CAB10025.1| 481|Caenorhabditis elegans Hypothetical pr... 99 2e-21
AL031630-22|CAA20995.2| 454|Caenorhabditis elegans Hypothetical... 93 2e-19
Z11505-1|CAA77582.1| 460|Caenorhabditis elegans Hypothetical pr... 81 7e-16
AC024842-7|AAF59620.1| 457|Caenorhabditis elegans Hypothetical ... 64 9e-11
AF125971-5|AAD14765.1| 484|Caenorhabditis elegans Hypothetical ... 50 1e-06
U00055-6|AAA50724.1| 494|Caenorhabditis elegans Hypothetical pr... 48 6e-06
AL021474-3|CAD54163.1| 519|Caenorhabditis elegans Hypothetical ... 45 6e-05
Z30423-12|CAA83006.2| 486|Caenorhabditis elegans Hypothetical p... 38 0.005
AF031935-1|AAB87066.1| 486|Caenorhabditis elegans UNC-47 protein. 38 0.005
Z68748-8|CAL36498.1| 583|Caenorhabditis elegans Hypothetical pr... 35 0.049
Z68748-4|CAD27622.1| 617|Caenorhabditis elegans Hypothetical pr... 35 0.049
Z68748-3|CAA92953.2| 615|Caenorhabditis elegans Hypothetical pr... 35 0.049
U23518-2|AAC70884.4| 496|Caenorhabditis elegans Hypothetical pr... 34 0.085
Z81118-4|CAB03327.1| 309|Caenorhabditis elegans Hypothetical pr... 32 0.34
U61956-5|AAB03178.2| 286|Caenorhabditis elegans Serpentine rece... 29 2.4
AJ277649-1|CAB90211.1| 917|Caenorhabditis elegans CHE-14 protei... 29 3.2
AF067618-5|AAC19198.2| 917|Caenorhabditis elegans Abnormal chem... 29 3.2
Z81536-7|CAB04367.1| 338|Caenorhabditis elegans Hypothetical pr... 28 5.6
U13019-13|AAC24450.1| 336|Caenorhabditis elegans Serpentine rec... 28 5.6
AL032630-11|CAA21570.1| 296|Caenorhabditis elegans Hypothetical... 28 5.6
Z83239-8|CAH60787.1| 311|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z82284-3|CAB05293.1| 350|Caenorhabditis elegans Hypothetical pr... 28 7.4
U39651-7|AAA80398.2| 494|Caenorhabditis elegans Hypothetical pr... 28 7.4
AF022981-10|AAG24203.1| 360|Caenorhabditis elegans Serpentine r... 28 7.4
Z81069-3|CAB02989.1| 352|Caenorhabditis elegans Hypothetical pr... 27 9.8
>AF025468-4|AAB71045.1| 449|Caenorhabditis elegans Hypothetical
protein T27A1.5 protein.
Length = 449
Score = 159 bits (387), Expect = 1e-39
Identities = 81/249 (32%), Positives = 132/249 (53%), Gaps = 1/249 (0%)
Query: 1 MPLAFSNSGWAVGIIGTIVIAFVCGHCVHIFVKTSRGCCKLVRRPLLSYSETCKAAFEHG 60
+PLAF +SG +G+I I +C +C + + R + Y+ ++A E G
Sbjct: 60 LPLAFKHSGIWLGLILLCFICLICIYCTRQLIFGQHYITFIKREQRMDYANVMRSAVELG 119
Query: 61 PKSLRPFAFAAQLFSEFALFFTYIGVCCIFTVLIADSLKQLFDEYVTTTVLPVEYYCLII 120
P +R + + +F G CC++ V +AD+LKQ FD+ + + + L+
Sbjct: 120 PAWIRGHGYLFKQMVNINMFVAQFGFCCVYFVFMADNLKQFFDQTSSIHISQAGWIALL- 178
Query: 121 LVPLCLMVQIRHLKWLAPFSFIANILLIATFVICMYYIFGDEINFTDKRISGDLSRLPAF 180
L+P+ + IR LK LAP + +AN + I VI + +F D G + LP F
Sbjct: 179 LIPISALCTIRELKALAPLAAVANFVYIIAVVIVLADLFSDWQPLDSLPAFGAVENLPLF 238
Query: 181 LSTVIFAMEGIGVVMPVENTMKKPQHFLGCPSVLVVAMSTIMLMYSILGLFGYFRYGDVL 240
TV+FA EG+ VV+P+EN M +P HF+ VL + ++L+Y +G FG+ RYG+ +
Sbjct: 239 FGTVMFAFEGVAVVLPIENQMNEPIHFITPNGVLNTSCILVLLVYMTVGFFGFLRYGNDI 298
Query: 241 RGSITLNLP 249
+ ++TLNLP
Sbjct: 299 KDTLTLNLP 307
>AL021481-5|CAA16336.2| 455|Caenorhabditis elegans Hypothetical
protein Y43F4B.7 protein.
Length = 455
Score = 157 bits (382), Expect = 5e-39
Identities = 75/250 (30%), Positives = 136/250 (54%), Gaps = 1/250 (0%)
Query: 1 MPLAFSNSGWAVGIIGTIVIAFVCGHCVHIFVKTSRGCCKLVRRPLLSYSETCKAAFEHG 60
+PLAF +SG +G+I T++I +C +C+ V + C R L+ Y+ + A E G
Sbjct: 70 LPLAFKHSGLFLGLILTVLICLICLYCMRQVVFAAHFVCNRNGRDLIDYANIMRGAVEMG 129
Query: 61 PKSLRPFAFAAQLFSEFALFFTYIGVCCIFTVLIADSLKQLFDEYVTTTVLPVEYYCLII 120
P ++ + + +F + +G CC++ V +AD+L+ F+ T+ L + L++
Sbjct: 130 PPWIKRNGYFFKQLVNVNMFISQLGFCCVYFVFMADNLEDFFNNN-TSIHLSKAVWMLLL 188
Query: 121 LVPLCLMVQIRHLKWLAPFSFIANILLIATFVICMYYIFGDEINFTDKRISGDLSRLPAF 180
L+P+ + IR L LAPF+ AN++ + + +++ D + G + LP F
Sbjct: 189 LIPMLSICSIRRLSILAPFAMAANVVYVVAVAVVLFFFLSDLRPISSLPWFGKATDLPLF 248
Query: 181 LSTVIFAMEGIGVVMPVENTMKKPQHFLGCPSVLVVAMSTIMLMYSILGLFGYFRYGDVL 240
TV+FA EG+ V+MP+EN M+ P F+ VL + ++ ++S+ G +GY G+ +
Sbjct: 249 FGTVMFAFEGVAVIMPIENRMQSPHAFISWNGVLNSSCLVVLAIFSVTGFYGYLSLGNDV 308
Query: 241 RGSITLNLPI 250
+ + TLNLP+
Sbjct: 309 KDTATLNLPM 318
>U28928-5|AAQ01535.1| 434|Caenorhabditis elegans Hypothetical
protein C44B7.6b protein.
Length = 434
Score = 124 bits (298), Expect = 8e-29
Identities = 72/252 (28%), Positives = 125/252 (49%), Gaps = 2/252 (0%)
Query: 1 MPLAFSNSGWAVGIIGTIVIAFVCGHCVHIFVKTSRGCCKLVRRPLLSYSETCKAAFEHG 60
+PLAF SG+ G++ +V+ F+C C+ VK + K+ + L Y A +
Sbjct: 42 VPLAFKQSGYVSGLVIIVVLGFLCALCMIKLVKCAGYLSKVNQSAPLDYGNMAYKATQAS 101
Query: 61 PKSLRPFAFAAQLFSEFALFFTYIGVCCIFTVLIADSLKQLFDEYVTTTVLPVEYYCLII 120
+R A ++ +L +G+CC F + + L +L E+V V ++
Sbjct: 102 YTPIRKLAPVSRALVNSSLCILQLGICCCFYIFVVYHLHELL-EFVMNDVPSRATLFPMV 160
Query: 121 LVPLCLMVQIRHLKWLAPFSFIANILLIATFVICMYYIFGDEIN-FTDKRISGDLSRLPA 179
L L+V + ++ L+ S N L++ + M+ + E D DL + +
Sbjct: 161 LPAFILLVSLSSMRALSLVSLGGNFLMLIALAVIMFQLLTTEHKKLADLPPVTDLMGIVS 220
Query: 180 FLSTVIFAMEGIGVVMPVENTMKKPQHFLGCPSVLVVAMSTIMLMYSILGLFGYFRYGDV 239
T+++A+EG +V+P+EN MKKP+ G VL V + ++++YS G FG+ YG+
Sbjct: 221 AAGTILYALEGQAMVLPLENRMKKPEDMKGPFGVLSVGVGMVVVIYSFAGFFGFLTYGND 280
Query: 240 LRGSITLNLPID 251
++ SITLNLP D
Sbjct: 281 VQDSITLNLPND 292
>U28928-4|AAA68337.2| 489|Caenorhabditis elegans Hypothetical
protein C44B7.6a protein.
Length = 489
Score = 124 bits (298), Expect = 8e-29
Identities = 72/252 (28%), Positives = 125/252 (49%), Gaps = 2/252 (0%)
Query: 1 MPLAFSNSGWAVGIIGTIVIAFVCGHCVHIFVKTSRGCCKLVRRPLLSYSETCKAAFEHG 60
+PLAF SG+ G++ +V+ F+C C+ VK + K+ + L Y A +
Sbjct: 97 VPLAFKQSGYVSGLVIIVVLGFLCALCMIKLVKCAGYLSKVNQSAPLDYGNMAYKATQAS 156
Query: 61 PKSLRPFAFAAQLFSEFALFFTYIGVCCIFTVLIADSLKQLFDEYVTTTVLPVEYYCLII 120
+R A ++ +L +G+CC F + + L +L E+V V ++
Sbjct: 157 YTPIRKLAPVSRALVNSSLCILQLGICCCFYIFVVYHLHELL-EFVMNDVPSRATLFPMV 215
Query: 121 LVPLCLMVQIRHLKWLAPFSFIANILLIATFVICMYYIFGDEIN-FTDKRISGDLSRLPA 179
L L+V + ++ L+ S N L++ + M+ + E D DL + +
Sbjct: 216 LPAFILLVSLSSMRALSLVSLGGNFLMLIALAVIMFQLLTTEHKKLADLPPVTDLMGIVS 275
Query: 180 FLSTVIFAMEGIGVVMPVENTMKKPQHFLGCPSVLVVAMSTIMLMYSILGLFGYFRYGDV 239
T+++A+EG +V+P+EN MKKP+ G VL V + ++++YS G FG+ YG+
Sbjct: 276 AAGTILYALEGQAMVLPLENRMKKPEDMKGPFGVLSVGVGMVVVIYSFAGFFGFLTYGND 335
Query: 240 LRGSITLNLPID 251
++ SITLNLP D
Sbjct: 336 VQDSITLNLPND 347
>Z97191-2|CAB10025.1| 481|Caenorhabditis elegans Hypothetical
protein H32K16.1 protein.
Length = 481
Score = 99 bits (238), Expect = 2e-21
Identities = 65/254 (25%), Positives = 123/254 (48%), Gaps = 8/254 (3%)
Query: 1 MPLAFSNSGWAVGIIGTIVIAFVCGHCVHIFVKTSRGCCKLVRRPLLSYSETCKAAFEHG 60
+ ++F +G G+ ++ F+ + +H V S+ K L Y E +AA ++
Sbjct: 84 LAVSFKQAGLWGGLALVFIVGFLSLYSMHKIVNCSQYLAKSNGDQSLDYGEMAEAAMQNS 143
Query: 61 PKSLRPFAFAAQLFSEFALFFTYIGVCCIFTVLIADSLKQLFDEYVTTTVLPVEYYCLII 120
K R A++ L +GV +F V + + ++++ + + P C++I
Sbjct: 144 YKWARKHGKLAKIVINACLLAFQLGVITVFMVFAVEHVIEIWEFFADSP--PPFSKCVMI 201
Query: 121 L---VPLCLMVQIRHLKWLAPFSFIANILLIATFVICMYYIFGDEINFTDK--RISGDLS 175
L VP L+ I H+K L N+++ A V+ + T + ++G +
Sbjct: 202 LMYFVPQMLLNFIGHMKLLTILCLFGNVIIFAAIVLITKELMVHTWYPTWELGSVTG-IE 260
Query: 176 RLPAFLSTVIFAMEGIGVVMPVENTMKKPQHFLGCPSVLVVAMSTIMLMYSILGLFGYFR 235
+ +I++ EG +V+P+EN++K P+ G VL AM+ + ++Y+ LG FGY
Sbjct: 261 GISLAAGALIYSFEGQAMVLPMENSLKYPKDMTGATGVLSTAMNLVTVLYAFLGFFGYVT 320
Query: 236 YGDVLRGSITLNLP 249
+G ++GS+TLNLP
Sbjct: 321 FGPAVQGSLTLNLP 334
>AL031630-22|CAA20995.2| 454|Caenorhabditis elegans Hypothetical
protein Y38H6C.17 protein.
Length = 454
Score = 93.1 bits (221), Expect = 2e-19
Identities = 61/253 (24%), Positives = 120/253 (47%), Gaps = 6/253 (2%)
Query: 1 MPLAFSNSGWAVGIIGTIVIAFVCGHCVHIFVKTSRGCCKLVRRPLLSYSETCKAAFEHG 60
+ ++F +G G +I + + +H V S+ + L Y E K+A E+
Sbjct: 56 LAVSFKQAGLWGGFASVFIIGGLSLYSMHKIVNCSQFLSEKKGDQKLDYGEMAKSAMENS 115
Query: 61 PKSLRPFAFAAQLFSEFALFFTYIGVCCIFTVLIADSLKQLFDEYVTTTVLPVEYYCLII 120
+ + A++ L +GV + + + + +++ +++ + P LI+
Sbjct: 116 YGWAKKYGKIAKVVVNTCLLAFQLGVITVSMIFAVEHIIEIW-QFIAGSPPPFSKIVLIL 174
Query: 121 L--VPLCLMVQIRHLKWLAPFSFIANILLIATFVICMYYIFGDEINFTDK--RISGDLSR 176
+ VP L I H++ + S N+++ A + + T + I+G +
Sbjct: 175 MYFVPQMLFNLIGHIRIITFLSLCGNVIIFAAIALITQELLSHTWYPTWELPSITG-VEG 233
Query: 177 LPAFLSTVIFAMEGIGVVMPVENTMKKPQHFLGCPSVLVVAMSTIMLMYSILGLFGYFRY 236
+ ++I++ EG +V+P+EN++K PQ G VL AM+ +++ Y+ LG FGY +
Sbjct: 234 VSLAAGSLIYSFEGQAMVLPLENSLKHPQDMRGLTGVLSTAMNVVIVFYAFLGFFGYIAF 293
Query: 237 GDVLRGSITLNLP 249
G +RGS+TLNLP
Sbjct: 294 GPDVRGSLTLNLP 306
>Z11505-1|CAA77582.1| 460|Caenorhabditis elegans Hypothetical
protein F59B2.2 protein.
Length = 460
Score = 81.0 bits (191), Expect = 7e-16
Identities = 56/251 (22%), Positives = 109/251 (43%), Gaps = 2/251 (0%)
Query: 1 MPLAFSNSGWAVGIIGTIVIAFVCGHCVHIFVKTSRGCCKLVRRPLLSYSETCKAAFEHG 60
+P A+ G V + + VIA + + HI V+ S+ K R L Y K ++
Sbjct: 58 LPYAWKLGGLWVSFVMSFVIAGLNWYGNHILVRASQHLAKKSDRSALDYGHFAKKVCDYS 117
Query: 61 P-KSLRPFAFAAQLFSEFALFFTYIGVCCIFTVLIADSLKQLFDEYVT-TTVLPVEYYCL 118
+ LR + A F + F +G+C + + I+D+L L +++ T +
Sbjct: 118 DIRFLRNNSKAVMYFVNVTILFYQLGMCSVAILFISDNLVNLVGDHLGGTRHQQMILMAT 177
Query: 119 IILVPLCLMVQIRHLKWLAPFSFIANILLIATFVICMYYIFGDEINFTDKRISGDLSRLP 178
+ L + L ++ ++ F+ ++++ + + M Y + + + +
Sbjct: 178 VSLFFILLTNMFTEMRIVSFFALVSSVFFVIGAAVIMQYTVQQPNQWDKLPAATNFTGTI 237
Query: 179 AFLSTVIFAMEGIGVVMPVENTMKKPQHFLGCPSVLVVAMSTIMLMYSILGLFGYFRYGD 238
+ ++A EG +++P+EN + P FL VL M + LG FGY +GD
Sbjct: 238 TMIGMSMYAFEGQTMILPIENKLDNPAAFLAPFGVLSTTMIICTAFMTALGFFGYTGFGD 297
Query: 239 VLRGSITLNLP 249
+ +IT N+P
Sbjct: 298 SIAPTITTNVP 308
>AC024842-7|AAF59620.1| 457|Caenorhabditis elegans Hypothetical
protein Y59H11AR.4 protein.
Length = 457
Score = 64.1 bits (149), Expect = 9e-11
Identities = 58/241 (24%), Positives = 109/241 (45%), Gaps = 16/241 (6%)
Query: 16 GTIVIAFVCGHCVHIFVKTSRGCCKLVRRPLLS-YSETCKAAF-EHGPKSLRPFAFAAQL 73
GTI + +C + + T G ++ + S YSE C+ + E K+L + +
Sbjct: 38 GTITLIVMC--LITYYTATLLGNNWIIMKTRWSEYSEHCRNPYPEMAHKALGTWM---GM 92
Query: 74 FSEFALFFTYIGVCCIFTVLIADSLKQLFDEY-VTTTVLPVEYYCLIILVPLCLMVQIRH 132
+ F +FT G +F++L A +L ++ + + + T+ +IL P ++ H
Sbjct: 93 TTNFCTYFTVFGGTAVFSLLAAKTLAEVLNGFGIGATMCTTLITVGLILWPFVMLKSPAH 152
Query: 133 LKWLAPFSFIANILLIATFVICMYYIFGDEINFTDKRISGDLSRLPAF--LSTVIFAMEG 190
W S +A I + + ++ F D D + A L+T+IFA G
Sbjct: 153 F-WQV--SIVATISTVTAVALILFGYFLDAKGCYPHSSYPDFTPTAASNSLATIIFAYGG 209
Query: 191 IGVVMPVENTMKKPQHFLGCPSVLVVAMSTIMLMYSILGLFGYFRYGDVLRGSITLNLPI 250
+ + + MK PQH+ C +++ + L+Y+ + LFG++ YGD + SI ++
Sbjct: 210 HPCIPTIVHDMKTPQHYFRC---FLLSYIALFLLYTPVSLFGFWIYGDSVSDSIISSIQN 266
Query: 251 D 251
D
Sbjct: 267 D 267
>AF125971-5|AAD14765.1| 484|Caenorhabditis elegans Hypothetical
protein Y4C6B.2a protein.
Length = 484
Score = 50.4 bits (115), Expect = 1e-06
Identities = 57/250 (22%), Positives = 103/250 (41%), Gaps = 20/250 (8%)
Query: 1 MPLAFSNSGWAVGIIGTIVIAFVCGHCVHIFVKTSRGCCKLVRRPLLSYSETCKAAFEH- 59
+P A ++G G +V A VC + + + +++ Y + C+ +
Sbjct: 32 LPTAIVSTGAVTGAFLLLVAAVVCTYTGILLAEN----WTILQELYPEYRDHCRKPYPAM 87
Query: 60 GPKSLRPFAFAAQLFSEFALFFTYIGVCCIFTVLIADSLKQLFDEYVTTTVLPVEYYCLI 119
G +++ P FA F L T G +F +L A + + + T V +C +
Sbjct: 88 GLRAIGP-KFAH--FVSAMLQVTQFGTAVVFVLLAAKNGENMLHANFGTHVS----FCYM 140
Query: 120 ILVPLCLMVQIRHLKWLAPFSFIANILLIATFVICMYYIFG--DEINFTDKRI---SGDL 174
IL+ L+ K F + +I+T + + IFG + K + S +
Sbjct: 141 ILIVGLLVFPFTLPKSPKDFWYAVVAAMISTTISVVLIIFGTVQDYEVCHKEVFYPSFNF 200
Query: 175 SRLPAFLSTVIFAMEGIGVVMPVENTMKKPQHFLGCPSVLVVAMSTIMLMYSILGLFGYF 234
S+ T++F+ G +++ MKKP HF +++A I + Y + + GYF
Sbjct: 201 SKTLMSFGTIMFSYGGHCAFPTIQHDMKKPHHF---SRSIIIAFIIIFIFYLPVSMSGYF 257
Query: 235 RYGDVLRGSI 244
YG L SI
Sbjct: 258 VYGSSLTDSI 267
>U00055-6|AAA50724.1| 494|Caenorhabditis elegans Hypothetical
protein R02F2.8 protein.
Length = 494
Score = 48.0 bits (109), Expect = 6e-06
Identities = 57/257 (22%), Positives = 113/257 (43%), Gaps = 22/257 (8%)
Query: 3 LAFSNSGWAVGIIGTIVIAFVCGHCVHIF-VKTSRGCC---KLVRRPLLSYSETCKAAFE 58
+A S + ++G+I +++ +C IF + T+ C K+++ Y + C+ +
Sbjct: 43 IALSYALTSMGLIPGLILLSLCS----IFSLYTALELCWTWKIMQNRWPEYRDHCRKPY- 97
Query: 59 HGPKSLRPFAFAAQLFSEFALFFTYIGVCCIFTVLIADSLKQLFDEYVTTTVLPVEYYCL 118
G + R + F F + T IG + +L A +L L + + + Y L
Sbjct: 98 -GEMAYRTIGRKMRSFIAFMICITQIGFATVLVLLAAKNLSILLHFFFSLDINQC-YLIL 155
Query: 119 II---LVPLCLMVQIRHLKWLAPFSFIANILLIATFVICMYYIFGDEINFTDKRISGDLS 175
I+ + P ++ H A FS ++ + V+ + + D + +
Sbjct: 156 IVGLAVWPATMLPSPMHFWQAALFSAGSSTCAVILVVVGLAH---DAPVCAQDAPHEEPN 212
Query: 176 RLPAFLS--TVIFAMEGIGVVMPVENTMKKPQHFLGCPSVLVVAMSTIMLMYSILGLFGY 233
L AF++ T +FA G + +++ MKKP HF+ +V+A+ ++Y + + GY
Sbjct: 213 LLKAFMAFGTFVFAFGGHATLPTIQHDMKKPAHFV---HSVVLAIIFCTMLYMCIAVGGY 269
Query: 234 FRYGDVLRGSITLNLPI 250
F YG + +I +L I
Sbjct: 270 FVYGSTVGEAIIPSLQI 286
>AL021474-3|CAD54163.1| 519|Caenorhabditis elegans Hypothetical
protein Y32F6A.4 protein.
Length = 519
Score = 44.8 bits (101), Expect = 6e-05
Identities = 39/188 (20%), Positives = 81/188 (43%), Gaps = 18/188 (9%)
Query: 65 RPFAFAAQLFSEFALFFTYIGVCCIFTVLIADSLKQLFDEYVTTTVLPVEYYCLIILVPL 124
R QL + T + ++ +L + ++ + + T + +C++IL+
Sbjct: 134 RAMGKTCQLLVSICIDVTQFMISVVYLLLASKNIMNMIIAFSGTHIS----FCILILIVA 189
Query: 125 CLMVQIRHLKWLAPFSFIANILLIATFVICMYYIFGDEINFTDKRISGDLSRLPAF---- 180
++ + LK F + I ++ T + I G I++ ++LP F
Sbjct: 190 TCLLPLCFLKSPQDFWWAVVIAMMTTSAAVILIIVGSIIDYGK---CAPFAKLPPFRTTN 246
Query: 181 ----LSTVIFAMEGIGVVMPVENTMKKPQHFLGCPSVLVVAMSTIMLMYSILGLFGYFRY 236
+ T++F++ G +++ MK+P+ F + +A + + MY + + GY Y
Sbjct: 247 LFLSMGTLLFSVGGHSAFPTIQHDMKQPKEFTRS---VFLAFTIMAFMYIPVCIMGYLVY 303
Query: 237 GDVLRGSI 244
GD LR SI
Sbjct: 304 GDSLRDSI 311
>Z30423-12|CAA83006.2| 486|Caenorhabditis elegans Hypothetical
protein T20G5.6 protein.
Length = 486
Score = 38.3 bits (85), Expect = 0.005
Identities = 34/167 (20%), Positives = 75/167 (44%), Gaps = 9/167 (5%)
Query: 84 IGVCCIFTVLIADSLKQLFDEYVTTTVLPVEYYCLIILVPLCLMVQIRHLKWLAPFSFIA 143
+ C I+ VL AD L+ F + + L+ + ++ + L+ F+ I+
Sbjct: 178 LSTCIIYLVLAADLLQSCFPSVDKAGWMMITSASLLTC---SFLDDLQIVSRLSFFNAIS 234
Query: 144 NILLIATFVICMYYI-FGDEINFTDKRISGDLSRLPAFLSTVIFAMEGIGVVMPVENTMK 202
+ LI ++ +Y + F + +F+ S +++ LP + V+F + +E MK
Sbjct: 235 H--LIVNLIMVLYCLSFVSQWSFSTITFSLNINTLPTIVGMVVFGYTSHIFLPNLEGNMK 292
Query: 203 KPQHFLGCPSVLVVAMSTIMLMYSILGLFGYFRYGDVLRGSITLNLP 249
P F +A + +++ G+ G+ +G++ + I+ +LP
Sbjct: 293 NPAQFNVMLKWSHIAAAVFKVVF---GMLGFLTFGELTQEEISNSLP 336
>AF031935-1|AAB87066.1| 486|Caenorhabditis elegans UNC-47 protein.
Length = 486
Score = 38.3 bits (85), Expect = 0.005
Identities = 34/167 (20%), Positives = 75/167 (44%), Gaps = 9/167 (5%)
Query: 84 IGVCCIFTVLIADSLKQLFDEYVTTTVLPVEYYCLIILVPLCLMVQIRHLKWLAPFSFIA 143
+ C I+ VL AD L+ F + + L+ + ++ + L+ F+ I+
Sbjct: 178 LSTCIIYLVLAADLLQSCFPSVDKAGWMMITSASLLTC---SFLDDLQIVSRLSFFNAIS 234
Query: 144 NILLIATFVICMYYI-FGDEINFTDKRISGDLSRLPAFLSTVIFAMEGIGVVMPVENTMK 202
+ LI ++ +Y + F + +F+ S +++ LP + V+F + +E MK
Sbjct: 235 H--LIVNLIMVLYCLSFVSQWSFSTITFSLNINTLPTIVGMVVFGYTSHIFLPNLEGNMK 292
Query: 203 KPQHFLGCPSVLVVAMSTIMLMYSILGLFGYFRYGDVLRGSITLNLP 249
P F +A + +++ G+ G+ +G++ + I+ +LP
Sbjct: 293 NPAQFNVMLKWSHIAAAVFKVVF---GMLGFLTFGELTQEEISNSLP 336
>Z68748-8|CAL36498.1| 583|Caenorhabditis elegans Hypothetical
protein F13H10.3c protein.
Length = 583
Score = 35.1 bits (77), Expect = 0.049
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 1 MPLAFSNSGWAVGIIGTIVIAFVCGHCVHIFVKTSRGCCKLVRRPLLS-YSETCKAAF 57
MP A +G +GII + +A +C + +I +++ + L PLL+ +S+ CK+ F
Sbjct: 152 MPWALQQAGLVLGIIIMLSMAAICFYTAYIVIESPKRLQDLSVDPLLAEFSDVCKSLF 209
>Z68748-4|CAD27622.1| 617|Caenorhabditis elegans Hypothetical
protein F13H10.3b protein.
Length = 617
Score = 35.1 bits (77), Expect = 0.049
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 1 MPLAFSNSGWAVGIIGTIVIAFVCGHCVHIFVKTSRGCCKLVRRPLLS-YSETCKAAF 57
MP A +G +GII + +A +C + +I +++ + L PLL+ +S+ CK+ F
Sbjct: 186 MPWALQQAGLVLGIIIMLSMAAICFYTAYIVIESPKRLQDLSVDPLLAEFSDVCKSLF 243
>Z68748-3|CAA92953.2| 615|Caenorhabditis elegans Hypothetical
protein F13H10.3a protein.
Length = 615
Score = 35.1 bits (77), Expect = 0.049
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 1 MPLAFSNSGWAVGIIGTIVIAFVCGHCVHIFVKTSRGCCKLVRRPLLS-YSETCKAAF 57
MP A +G +GII + +A +C + +I +++ + L PLL+ +S+ CK+ F
Sbjct: 184 MPWALQQAGLVLGIIIMLSMAAICFYTAYIVIESPKRLQDLSVDPLLAEFSDVCKSLF 241
>U23518-2|AAC70884.4| 496|Caenorhabditis elegans Hypothetical
protein F21D12.3 protein.
Length = 496
Score = 34.3 bits (75), Expect = 0.085
Identities = 53/256 (20%), Positives = 103/256 (40%), Gaps = 24/256 (9%)
Query: 1 MPLAFSNSGWAVGIIGTIVIAFVCGHCVHIFVKTSRGCCKLVRRPLLSYSETCKAAFEHG 60
MP+AF SG +GI+ + +A + ++ K K++ R + C+ F
Sbjct: 65 MPVAFKLSGLPMGILIMLTVAVSFEYTGYLLGKVWN---KIMERN--PHIGVCRKPFPEM 119
Query: 61 PKSLRPFAFAAQLFSEFALFFTYIGVCCIFTVLIADSLKQLFDEYVTTTVLPVEYY--CL 118
K R Q F+ T GV ++ +L A+ + + + VL V+ CL
Sbjct: 120 AK--RTMGTNMQRFTSVLGNVTQFGVSVVYLLLSANII-----HFFISHVLHVDSISNCL 172
Query: 119 IILVPLCLMVQIRHLKWLAPFSFIANILLIATFVICMYYIFGDEINFT------DKRISG 172
+I V L+ L F + ++ T + + G ++ T ++
Sbjct: 173 VITVLAFLIWPFTLLASPGEFWVVIVFAMLTTVIAVVSIHTGIALDSTACFSAVSYPVTT 232
Query: 173 DLSRLPAFLSTVIFAMEGIGVVMPVENTMKKPQHFLGCPSVLVVAMSTIMLMYSILGLFG 232
S + +F +FA G V +++ MK P+ F + ++++Y L +F
Sbjct: 233 STSTILSF-GIFLFAFSGHYVFPTIQHDMKNPRDF---TKSIFAGFLGVVILYLPLCIFA 288
Query: 233 YFRYGDVLRGSITLNL 248
+ YGD + S+ ++
Sbjct: 289 FVVYGDSMTDSVIYSI 304
>Z81118-4|CAB03327.1| 309|Caenorhabditis elegans Hypothetical
protein T10G3.4 protein.
Length = 309
Score = 32.3 bits (70), Expect = 0.34
Identities = 16/37 (43%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 118 LIILVPLCLMVQIRHLKWLAPFSFIANILLIATFVIC 154
+II V LC+++ I H K PF ++ ILLI+++ IC
Sbjct: 26 VIIFVLLCILLTI-HSKTFHPFFTLSFILLISSYAIC 61
>U61956-5|AAB03178.2| 286|Caenorhabditis elegans Serpentine
receptor, class x protein20 protein.
Length = 286
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/89 (21%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Query: 100 QLFDEYVTTTVLPVEYYC-LIILVPLCLMVQIRHLKWLAPFSFIANILLIATFVICMYY- 157
Q + +T ++ + +I+LV + M +R + F I + ++C+ +
Sbjct: 4 QFINSIITVLIMSFGLFANIIVLVTVRKMSSMR-----SSFGIITKNQAVCNILMCLLFL 58
Query: 158 IFGDEINFTDKRISGDLSRLPAFLSTVIF 186
+F + TD ++ +LSR +S +IF
Sbjct: 59 VFVGPLQLTDLKLPYELSRFVGLISMIIF 87
>AJ277649-1|CAB90211.1| 917|Caenorhabditis elegans CHE-14 protein
protein.
Length = 917
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 4/84 (4%)
Query: 61 PKSLRPFAFAAQL-FSEFALFFTYIGVCCIFTVLIADSLK--QLFDEYVTTTVLPVEYYC 117
PK L F L + F +F T F + I ++ + F + TV+ Y+
Sbjct: 403 PKHLNEDTFHTFLSHTSFTMFLTCFSTIVPFFINITSNVIVFRCFGLFAGVTVI-FNYFM 461
Query: 118 LIILVPLCLMVQIRHLKWLAPFSF 141
++ +P L++Q RH F F
Sbjct: 462 VVSFLPAFLLIQYRHFDCFTGFKF 485
>AF067618-5|AAC19198.2| 917|Caenorhabditis elegans Abnormal
chemotaxis protein 14 protein.
Length = 917
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 4/84 (4%)
Query: 61 PKSLRPFAFAAQL-FSEFALFFTYIGVCCIFTVLIADSLK--QLFDEYVTTTVLPVEYYC 117
PK L F L + F +F T F + I ++ + F + TV+ Y+
Sbjct: 403 PKHLNEDTFHTFLSHTSFTMFLTCFSTIVPFFINITSNVIVFRCFGLFAGVTVI-FNYFM 461
Query: 118 LIILVPLCLMVQIRHLKWLAPFSF 141
++ +P L++Q RH F F
Sbjct: 462 VVSFLPAFLLIQYRHFDCFTGFKF 485
>Z81536-7|CAB04367.1| 338|Caenorhabditis elegans Hypothetical
protein F40D4.9a protein.
Length = 338
Score = 28.3 bits (60), Expect = 5.6
Identities = 9/29 (31%), Positives = 20/29 (68%)
Query: 136 LAPFSFIANILLIATFVICMYYIFGDEIN 164
L+ ++AN L++A FV +Y++ +++N
Sbjct: 43 LSKSEYVANFLIVAYFVFLPFYVYVNKVN 71
>U13019-13|AAC24450.1| 336|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 9 protein.
Length = 336
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 10 WAVGIIGT-IVIAFVCGHCVHIFVKTSRGCCKLVRRP 45
W V +G+ +++ FV G H ++ S GCCK +P
Sbjct: 278 WDVLNVGSPLIMIFVSGQLRHHVLEISIGCCKPKNKP 314
>AL032630-11|CAA21570.1| 296|Caenorhabditis elegans Hypothetical
protein Y62H9A.11 protein.
Length = 296
Score = 28.3 bits (60), Expect = 5.6
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Query: 159 FGDEINFTDK-RISG---DLSRLPAFLSTVIFAMEGIGVVMPVENTMKKPQHFLGCPSVL 214
FGDE+N T RI D L + +A+ G G P+E + ++ G P+ L
Sbjct: 131 FGDEMNKTSVFRIGACLADNDSLSDEMRKFRYAVAGFGHNFPIEASKREKLKTFGKPTDL 190
Query: 215 VVAMSTI 221
AM+T+
Sbjct: 191 AYAMNTL 197
>Z83239-8|CAH60787.1| 311|Caenorhabditis elegans Hypothetical
protein T09F5.16 protein.
Length = 311
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 115 YYCLIILVPLCLMVQ-IRHL---KWLAPFSFIANILLIATFVICMYYI 158
+ C ++ +P+ + ++ RHL K P ++I LL+A F C+Y I
Sbjct: 181 FLCALLYIPILISIRKARHLSSFKLHRPQNYIMYQLLLALFAKCIYAI 228
>Z82284-3|CAB05293.1| 350|Caenorhabditis elegans Hypothetical
protein T27E7.4 protein.
Length = 350
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 104 EYVTTTVLPVEYYCLIILVPLCLMVQIRHLKWLAPFSFIANILLIATFVICMYYIF 159
+YV + +++LVP + R FSF+ ILLI +IC +I+
Sbjct: 80 QYVIKKYFVLTMISILVLVPFAVYYCFRS----PDFSFLDKILLIPISIICAVFIY 131
>U39651-7|AAA80398.2| 494|Caenorhabditis elegans Hypothetical
protein ZK470.1 protein.
Length = 494
Score = 27.9 bits (59), Expect = 7.4
Identities = 36/182 (19%), Positives = 72/182 (39%), Gaps = 9/182 (4%)
Query: 66 PFAFAAQLFSEFALFFTYIGVCCIFTVLIADSLKQLFDEYVTTTVLPVEYYCLIILVPLC 125
P +F+ L T +G+ C +VL+A+ + + L V + L++ +
Sbjct: 246 PGVLNTDIFNFIRLGLTILGIICNISVLVANLVNGRNKHGILKIRLLVLFLILVMTITCI 305
Query: 126 LMVQIRHLKWLAP--FSFIANILLIATFVIC----MYYIFGDEINFTDKRISGDL-SRLP 178
LM I L + F N +A F+I + + I++ + +RL
Sbjct: 306 LMTVIFVFDCLTNGYWPFAENRKRLAYFLIAPLVFAFILMSSGIHYLILPFESFIYARLA 365
Query: 179 AFL--STVIFAMEGIGVVMPVENTMKKPQHFLGCPSVLVVAMSTIMLMYSILGLFGYFRY 236
L S + F + + +V+ E P + LV + ++++ + LF +FR
Sbjct: 366 LLLLPSAISFLLLSVCLVIKKERLNYDPGFSISLSKALVRVLYVVVIIDFLSRLFLFFRL 425
Query: 237 GD 238
+
Sbjct: 426 AE 427
>AF022981-10|AAG24203.1| 360|Caenorhabditis elegans Serpentine
receptor, class h protein82 protein.
Length = 360
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/42 (35%), Positives = 27/42 (64%), Gaps = 4/42 (9%)
Query: 132 HLKWLAPFSFI---ANILLIATFVICM-YYIFGDEINFTDKR 169
++K+LA F+ + + I +A FV+C YY+F + +FT K+
Sbjct: 208 YIKFLALFTVLGTLSEICQMAFFVLCCSYYLFFSKSSFTSKK 249
>Z81069-3|CAB02989.1| 352|Caenorhabditis elegans Hypothetical
protein F25H9.3 protein.
Length = 352
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/38 (36%), Positives = 18/38 (47%)
Query: 197 VENTMKKPQHFLGCPSVLVVAMSTIMLMYSILGLFGYF 234
V+ +KP HF GC S + I L YS + YF
Sbjct: 263 VDKIHEKPLHFKGCISANEQGDNKIQLGYSFINEIPYF 300
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.333 0.146 0.469
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,913,799
Number of Sequences: 27539
Number of extensions: 237015
Number of successful extensions: 1211
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1162
Number of HSP's gapped (non-prelim): 37
length of query: 253
length of database: 12,573,161
effective HSP length: 80
effective length of query: 173
effective length of database: 10,370,041
effective search space: 1794017093
effective search space used: 1794017093
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (21.5 bits)
S2: 58 (27.5 bits)
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