GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001150-TA|BGIBMGA001150-PA|IPR013057|Amino acid
transporter, transmembrane
         (252 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    25   0.73 
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    25   0.73 
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   3.0  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    22   5.2  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   6.8  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    21   6.8  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   6.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   6.8  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   9.0  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   9.0  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   9.0  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   9.0  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   9.0  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 24.6 bits (51), Expect = 0.73
 Identities = 12/24 (50%), Positives = 18/24 (75%)

Query: 218 LWKNVLILLFGLGSLVSGCTVTIM 241
           L+ N+LI L GL ++V+  TVTI+
Sbjct: 140 LYVNILIHLSGLVTIVATLTVTII 163


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 24.6 bits (51), Expect = 0.73
 Identities = 12/24 (50%), Positives = 18/24 (75%)

Query: 218 LWKNVLILLFGLGSLVSGCTVTIM 241
           L+ N+LI L GL ++V+  TVTI+
Sbjct: 140 LYVNILIHLSGLVTIVATLTVTII 163


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 12/46 (26%), Positives = 22/46 (47%), Gaps = 3/46 (6%)

Query: 104 ITLNLPTEEWPAIFAKIFIALSIFFTYPLQFYVVIDI-FTKYTKHH 148
           +  +L  +  P +F     ++ IFF +PL   +++ I   K   HH
Sbjct: 224 VCFSLVEDTLPCVF--FLGSILIFFIFPLAILIIVYILIAKTLMHH 267


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 11/31 (35%), Positives = 17/31 (54%)

Query: 135 YVVIDIFTKYTKHHIKENYQKMAQVVARTVG 165
           Y  IDI  +Y  +  KEN+ K+ Q + +  G
Sbjct: 138 YDGIDIDWEYPANADKENFVKLLQEMKQAFG 168


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 7/12 (58%), Positives = 11/12 (91%)

Query: 135 YVVIDIFTKYTK 146
           +VVID+F+K+ K
Sbjct: 220 FVVIDVFSKFLK 231


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 10/17 (58%), Positives = 12/17 (70%)

Query: 223 LILLFGLGSLVSGCTVT 239
           +ILL    SLVSGC +T
Sbjct: 8   IILLVLSESLVSGCLIT 24


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 9/39 (23%), Positives = 21/39 (53%)

Query: 46  FAMEGIGVVMPVENSMKKPQNFLGFPSVLVVAMSTIVFL 84
           FA +  G+V  ++        F G+P ++++  S+++ L
Sbjct: 190 FAKKMEGLVCSIKELNMIFNEFFGWPIIMIILYSSLMVL 228


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 10/23 (43%), Positives = 13/23 (56%)

Query: 120 IFIALSIFFTYPLQFYVVIDIFT 142
           +F+  S +FT  L FY    IFT
Sbjct: 71  LFLLCSGYFTVHLLFYCPFIIFT 93



 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/23 (39%), Positives = 12/23 (52%)

Query: 120 IFIALSIFFTYPLQFYVVIDIFT 142
           +F    IFF   L F + +D FT
Sbjct: 181 LFCCAFIFFNMHLLFLLCLDYFT 203


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/30 (30%), Positives = 15/30 (50%)

Query: 184 NIVGAIFYSILGLVIPAIVETVFRWNDLGK 213
           NI   I Y+ LG+     ++ +  W D+ K
Sbjct: 51  NICTHINYAFLGVYPNGTLQMIDEWGDIEK 80


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 6/17 (35%), Positives = 13/17 (76%)

Query: 1   MIANVLLVATYAICLYY 17
           +I+NV +++  A+C +Y
Sbjct: 232 IISNVTVISWQAVCTFY 248


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/26 (34%), Positives = 14/26 (53%)

Query: 6   LLVATYAICLYYIFGGGISFVDKKVA 31
           ++  TY I L  IFG G +  +  V+
Sbjct: 242 VIYTTYTIFLLLIFGSGSATPENNVS 267


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 6/17 (35%), Positives = 13/17 (76%)

Query: 1   MIANVLLVATYAICLYY 17
           +I+NV +++  A+C +Y
Sbjct: 232 IISNVTVISWQAVCTFY 248


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 6/17 (35%), Positives = 13/17 (76%)

Query: 1   MIANVLLVATYAICLYY 17
           +I+NV +++  A+C +Y
Sbjct: 552 IISNVTVISWQAVCTFY 568


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.330    0.146    0.447 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,225
Number of Sequences: 317
Number of extensions: 2530
Number of successful extensions: 16
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of query: 252
length of database: 114,650
effective HSP length: 55
effective length of query: 197
effective length of database: 97,215
effective search space: 19151355
effective search space used: 19151355
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 42 (21.0 bits)