Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001150-TA|BGIBMGA001150-PA|IPR013057|Amino acid
transporter, transmembrane
(252 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF025468-4|AAB71045.1| 449|Caenorhabditis elegans Hypothetical ... 134 8e-32
AL021481-5|CAA16336.2| 455|Caenorhabditis elegans Hypothetical ... 126 1e-29
Z97191-2|CAB10025.1| 481|Caenorhabditis elegans Hypothetical pr... 101 7e-22
AL031630-22|CAA20995.2| 454|Caenorhabditis elegans Hypothetical... 97 8e-21
U28928-5|AAQ01535.1| 434|Caenorhabditis elegans Hypothetical pr... 83 2e-16
U28928-4|AAA68337.2| 489|Caenorhabditis elegans Hypothetical pr... 83 2e-16
Z11505-1|CAA77582.1| 460|Caenorhabditis elegans Hypothetical pr... 79 2e-15
Z30423-12|CAA83006.2| 486|Caenorhabditis elegans Hypothetical p... 58 8e-09
AF031935-1|AAB87066.1| 486|Caenorhabditis elegans UNC-47 protein. 58 8e-09
U23518-2|AAC70884.4| 496|Caenorhabditis elegans Hypothetical pr... 51 7e-07
U00055-6|AAA50724.1| 494|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AL021474-3|CAD54163.1| 519|Caenorhabditis elegans Hypothetical ... 49 3e-06
AF125971-5|AAD14765.1| 484|Caenorhabditis elegans Hypothetical ... 48 6e-06
AC024842-7|AAF59620.1| 457|Caenorhabditis elegans Hypothetical ... 43 2e-04
AL021487-11|CAA16355.2| 330|Caenorhabditis elegans Hypothetical... 33 0.15
AF067943-3|AAC17664.1| 266|Caenorhabditis elegans Hypothetical ... 33 0.26
Z83123-8|CAB05613.2| 330|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z79759-5|CAB02140.2| 409|Caenorhabditis elegans Hypothetical pr... 30 1.4
AL021474-5|CAA16307.2| 673|Caenorhabditis elegans Hypothetical ... 29 3.2
Z49907-10|CAF31469.1| 844|Caenorhabditis elegans Hypothetical p... 28 5.6
Z49907-9|CAC42250.1| 875|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z49907-8|CAA90092.1| 880|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z48367-8|CAF31471.1| 844|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z48367-7|CAC42266.1| 875|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z48367-6|CAA88325.1| 880|Caenorhabditis elegans Hypothetical pr... 28 5.6
AF319613-1|AAG49523.1| 880|Caenorhabditis elegans CLC-type chlo... 28 5.6
AF173171-1|AAF13164.1| 844|Caenorhabditis elegans CLC chloride ... 28 5.6
Z70037-3|CAC42352.1| 902|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z70037-2|CAA93879.2| 906|Caenorhabditis elegans Hypothetical pr... 28 7.3
D84668-1|BAA86913.1| 902|Caenorhabditis elegans CLH-1 protein. 28 7.3
AF173170-1|AAF13163.1| 868|Caenorhabditis elegans CLC chloride ... 28 7.3
Z81533-3|CAB04335.1| 327|Caenorhabditis elegans Hypothetical pr... 27 9.7
AF026215-1|AAB71319.1| 352|Caenorhabditis elegans Serpentine re... 27 9.7
AC006617-11|AAF39766.2| 356|Caenorhabditis elegans Serpentine r... 27 9.7
>AF025468-4|AAB71045.1| 449|Caenorhabditis elegans Hypothetical
protein T27A1.5 protein.
Length = 449
Score = 134 bits (323), Expect = 8e-32
Identities = 75/245 (30%), Positives = 127/245 (51%), Gaps = 3/245 (1%)
Query: 2 IANVLLVATYAICLYYIFGGGISFVDKKVAGDPARYPAFISTVIFAMEGIGVVMPVENSM 61
+AN + + I L +F G P F TV+FA EG+ VV+P+EN M
Sbjct: 200 VANFVYIIAVVIVLADLFSDWQPLDSLPAFGAVENLPLFFGTVMFAFEGVAVVLPIENQM 259
Query: 62 KKPQNFLGFPSVLVVAMSTIVFLYSTLGLFGYFRYGDVLRGTITLNLP-TEEWPAIFAKI 120
+P +F+ VL + ++ +Y T+G FG+ RYG+ ++ T+TLNLP T + AI K+
Sbjct: 260 NEPIHFITPNGVLNTSCILVLLVYMTVGFFGFLRYGNDIKDTLTLNLPQTPFYQAI--KV 317
Query: 121 FIALSIFFTYPLQFYVVIDIFTKYTKHHIKENYQKMAQVVARTVGVTCCVGIGIALPLLE 180
L I +YPLQFYV ++ K+ K + E Q+ R GV + +P L
Sbjct: 318 MFVLCILVSYPLQFYVPMERVEKWIKRKVVEAKQEPMIYAIRFGGVLLTCAMAQLIPHLA 377
Query: 181 QIINIVGAIFYSILGLVIPAIVETVFRWNDLGKFKWILWKNVLILLFGLGSLVSGCTVTI 240
I++VG++ + L LV P ++E + ++ KW+ +N+ ++ F + +G ++
Sbjct: 378 LFISLVGSVAGTSLTLVFPPLIELLCSYSKQELTKWVWIRNIGLMAFAMVGFTTGTYASM 437
Query: 241 MDIIQ 245
+ II+
Sbjct: 438 VQIIE 442
>AL021481-5|CAA16336.2| 455|Caenorhabditis elegans Hypothetical
protein Y43F4B.7 protein.
Length = 455
Score = 126 bits (305), Expect = 1e-29
Identities = 74/245 (30%), Positives = 121/245 (49%), Gaps = 5/245 (2%)
Query: 1 MIANVLLVATYAICLYYIFGGGISFVDKKVAGDPARYPAFISTVIFAMEGIGVVMPVENS 60
M ANV+ V A+ L++ G P F TV+FA EG+ V+MP+EN
Sbjct: 209 MAANVVYVVAVAVVLFFFLSDLRPISSLPWFGKATDLPLFFGTVMFAFEGVAVIMPIENR 268
Query: 61 MKKPQNFLGFPSVLVVAMSTIVFLYSTLGLFGYFRYGDVLRGTITLNLPTEEWPAIFAKI 120
M+ P F+ + VL + ++ ++S G +GY G+ ++ T TLNLP + +
Sbjct: 269 MQSPHAFISWNGVLNSSCLVVLAIFSVTGFYGYLSLGNDVKDTATLNLPMTPFYQTIKLM 328
Query: 121 FIALSIFFTYPLQFYVVIDIFTKYTKHHIKENYQKMAQVVARTVGVTCCVGIGIALPLLE 180
F+A I +YPLQFYV ++ K+ I + Q + +AR GV I +P L
Sbjct: 329 FVA-CIMISYPLQFYVPMERIEKWITRKIPVDKQTLYIYIARYSGVILTCAIAELIPHLA 387
Query: 181 QIINIVGAIFYSILGLVIPAIVE--TVFRWNDLGKFKWILWKNVLILLFGLGSLVSGCTV 238
I+++GA + + L+ P +E T + N+L WI KN+++L F +G
Sbjct: 388 LFISLIGAFSGASMALLFPPCIELLTSYAKNELSTGLWI--KNIVLLTFAFIGFTTGTYS 445
Query: 239 TIMDI 243
+++I
Sbjct: 446 ALIEI 450
>Z97191-2|CAB10025.1| 481|Caenorhabditis elegans Hypothetical
protein H32K16.1 protein.
Length = 481
Score = 101 bits (241), Expect = 7e-22
Identities = 66/210 (31%), Positives = 115/210 (54%), Gaps = 10/210 (4%)
Query: 44 VIFAMEGIGVVMPVENSMKKPQNFLGFPSVLVVAMSTIVFLYSTLGLFGYFRYGDVLRGT 103
+I++ EG +V+P+ENS+K P++ G VL AM+ + LY+ LG FGY +G ++G+
Sbjct: 269 LIYSFEGQAMVLPMENSLKYPKDMTGATGVLSTAMNLVTVLYAFLGFFGYVTFGPAVQGS 328
Query: 104 ITLNLPTEEWPAIFAKIFIALSIFFTYPLQFYVVIDIFTKYTKHHIKENYQKMAQVV--A 161
+TLNLP + K + L IFF +Q YV++ + + I E+ + + +++ A
Sbjct: 329 LTLNLPNSIL-TVSIKGLLVLKIFFGSAIQLYVIVQMLLPSLRSKISEDRKMVHRLLPYA 387
Query: 162 RTVG-VTCCVGIGIALPLLEQIINIVGAIFYSILGLVIPAIVE-TVF-----RWNDLGKF 214
+G + + I + +P L QII +VG ++ L++P+ ++ VF + D+ KF
Sbjct: 388 LRLGLMLISLCIALIVPNLMQIIPLVGITSGLLISLILPSFLDCMVFLPVFKKQGDMFKF 447
Query: 215 KWILWKNVLILLFGLGSLVSGCTVTIMDII 244
L NV + + G L +G +I DII
Sbjct: 448 YQKLIINVFLFVLGWFFLGAGLYSSIDDII 477
>AL031630-22|CAA20995.2| 454|Caenorhabditis elegans Hypothetical
protein Y38H6C.17 protein.
Length = 454
Score = 97.5 bits (232), Expect = 8e-21
Identities = 60/211 (28%), Positives = 109/211 (51%), Gaps = 10/211 (4%)
Query: 43 TVIFAMEGIGVVMPVENSMKKPQNFLGFPSVLVVAMSTIVFLYSTLGLFGYFRYGDVLRG 102
++I++ EG +V+P+ENS+K PQ+ G VL AM+ ++ Y+ LG FGY +G +RG
Sbjct: 240 SLIYSFEGQAMVLPLENSLKHPQDMRGLTGVLSTAMNVVIVFYAFLGFFGYIAFGPDVRG 299
Query: 103 TITLNLPTEEWPAIFAKIFIALSIFFTYPLQFYVVIDIFTKYTKHHIKEN---YQKMAQV 159
++TLNLP ++ K + L + LQ ++++ + + + EN K+
Sbjct: 300 SLTLNLPNSVL-SVTVKGLLVLKVLLGNALQLFIIVQMLLPSLQAKVSENRKLIHKILPY 358
Query: 160 VARTVGVTCCVGIGIALPLLEQIINIVGAIFYSILGLVIPAIVETVF---RWNDLGKFKW 216
R + + + +A+P L +II VG ++ L+IP+ ++ + + G+ K
Sbjct: 359 ALRLSLMLVSLSLALAVPNLTEIIPFVGITSGLLISLIIPSFLDCIVFLPVLKERGEKKN 418
Query: 217 ILWK---NVLILLFGLGSLVSGCTVTIMDII 244
K N++I + G L SG +I D+I
Sbjct: 419 YYQKMITNIVIFVLGWLLLGSGLYSSIDDVI 449
>U28928-5|AAQ01535.1| 434|Caenorhabditis elegans Hypothetical
protein C44B7.6b protein.
Length = 434
Score = 82.6 bits (195), Expect = 2e-16
Identities = 46/165 (27%), Positives = 86/165 (52%), Gaps = 7/165 (4%)
Query: 43 TVIFAMEGIGVVMPVENSMKKPQNFLGFPSVLVVAMSTIVFLYSTLGLFGYFRYGDVLRG 102
T+++A+EG +V+P+EN MKKP++ G VL V + +V +YS G FG+ YG+ ++
Sbjct: 224 TILYALEGQAMVLPLENRMKKPEDMKGPFGVLSVGVGMVVVIYSFAGFFGFLTYGNDVQD 283
Query: 103 TITLNLPTEEWPAIFAKIFIALSIFFTYPLQFYVVIDIFTKYTKHHIK------ENYQKM 156
+ITLNLP + IF K + ++ + +Q + ++ + K ++ +++
Sbjct: 284 SITLNLPNDHL-GIFVKAVLLFVVYSGFLIQVFPIVAMIWPAIKKKLRTTCGVSTTTKRI 342
Query: 157 AQVVARTVGVTCCVGIGIALPLLEQIINIVGAIFYSILGLVIPAI 201
R V + A+P L ++ +VG +L LV P++
Sbjct: 343 VHFAFRYSIVIVVFLLSYAIPRLSDMVPLVGVTAGMLLALVFPSL 387
>U28928-4|AAA68337.2| 489|Caenorhabditis elegans Hypothetical
protein C44B7.6a protein.
Length = 489
Score = 82.6 bits (195), Expect = 2e-16
Identities = 46/165 (27%), Positives = 86/165 (52%), Gaps = 7/165 (4%)
Query: 43 TVIFAMEGIGVVMPVENSMKKPQNFLGFPSVLVVAMSTIVFLYSTLGLFGYFRYGDVLRG 102
T+++A+EG +V+P+EN MKKP++ G VL V + +V +YS G FG+ YG+ ++
Sbjct: 279 TILYALEGQAMVLPLENRMKKPEDMKGPFGVLSVGVGMVVVIYSFAGFFGFLTYGNDVQD 338
Query: 103 TITLNLPTEEWPAIFAKIFIALSIFFTYPLQFYVVIDIFTKYTKHHIK------ENYQKM 156
+ITLNLP + IF K + ++ + +Q + ++ + K ++ +++
Sbjct: 339 SITLNLPNDHL-GIFVKAVLLFVVYSGFLIQVFPIVAMIWPAIKKKLRTTCGVSTTTKRI 397
Query: 157 AQVVARTVGVTCCVGIGIALPLLEQIINIVGAIFYSILGLVIPAI 201
R V + A+P L ++ +VG +L LV P++
Sbjct: 398 VHFAFRYSIVIVVFLLSYAIPRLSDMVPLVGVTAGMLLALVFPSL 442
>Z11505-1|CAA77582.1| 460|Caenorhabditis elegans Hypothetical
protein F59B2.2 protein.
Length = 460
Score = 79.4 bits (187), Expect = 2e-15
Identities = 56/219 (25%), Positives = 99/219 (45%), Gaps = 11/219 (5%)
Query: 41 ISTVIFAMEGIGVVMPVENSMKKPQNFLGFPSVLVVAMSTIVFLYSTLGLFGYFRYGDVL 100
I ++A EG +++P+EN + P FL VL M + LG FGY +GD +
Sbjct: 240 IGMSMYAFEGQTMILPIENKLDNPAAFLAPFGVLSTTMIICTAFMTALGFFGYTGFGDSI 299
Query: 101 RGTITLNLPTEEWPAIFAKIFIALSIFFTYPLQFYVVIDIFTKYTKHHIKENYQKMAQVV 160
TIT N+P E + +F+ L + YVV D+F + + + + +
Sbjct: 300 APTITTNVPKEGLYST-VNVFLMLQSLLGNSIAMYVVYDMFFNGFRRKFGARFPNVPKWL 358
Query: 161 A----RTVGVTCCVGIGIALPLLEQIINIVGAIFYSILGLVIPAIVETVFRWND---LGK 213
+ R V + + +P LE +I +VG ++ L+ P E + W D L
Sbjct: 359 SDKGFRVFWVLVTYLMAVLIPKLEIMIPLVGVTSGALCALIFPPFFEMITFWTDWKGLLT 418
Query: 214 FKWILWK---NVLILLFGLGSLVSGCTVTIMDIIQVLKQ 249
++ + K N++++ G+ ++++G I IIQ Q
Sbjct: 419 YRQRMTKIFINLVVMAIGVFAIIAGVYTNIHAIIQSFSQ 457
>Z30423-12|CAA83006.2| 486|Caenorhabditis elegans Hypothetical
protein T20G5.6 protein.
Length = 486
Score = 57.6 bits (133), Expect = 8e-09
Identities = 44/222 (19%), Positives = 99/222 (44%), Gaps = 20/222 (9%)
Query: 38 PAFISTVIFAMEGIGVVMPVENSMKKPQNFLGFP--SVLVVAMSTIVFLYSTLGLFGYFR 95
P + V+F + +E +MK P F S + A+ +VF G+ G+
Sbjct: 268 PTIVGMVVFGYTSHIFLPNLEGNMKNPAQFNVMLKWSHIAAAVFKVVF-----GMLGFLT 322
Query: 96 YGDVLRGTITLNLPTEEWPAIFAKIFIALSIFFTYPLQFYVVIDIF----------TKYT 145
+G++ + I+ +LP + + I + + + +YPL FY + + T +T
Sbjct: 323 FGELTQEEISNSLPNQSFK-ILVNLILVVKALLSYPLPFYAAVQLLKNNLFLGYPQTPFT 381
Query: 146 KHHIKENYQKMAQVVARTVGVTCCVGIGIALPLLEQIINIVGAIFYSILGLVIPAIVETV 205
+ + + V R + V + + +++P L +++ +VG I ++L + PA+
Sbjct: 382 SCYSPDKSLREWAVTLRIILVLFTLFVALSVPYLVELMGLVGNITGTMLSFIWPALFHLY 441
Query: 206 FRWNDLGKFKWILWKNVLILLFGLGSLVSGCTVTIMDIIQVL 247
+ L F+ + ++I+ G +SG + M++++ +
Sbjct: 442 IKEKTLNNFEKRFDQGIIIM--GCSVCISGVYFSSMELLRAI 481
>AF031935-1|AAB87066.1| 486|Caenorhabditis elegans UNC-47 protein.
Length = 486
Score = 57.6 bits (133), Expect = 8e-09
Identities = 44/222 (19%), Positives = 99/222 (44%), Gaps = 20/222 (9%)
Query: 38 PAFISTVIFAMEGIGVVMPVENSMKKPQNFLGFP--SVLVVAMSTIVFLYSTLGLFGYFR 95
P + V+F + +E +MK P F S + A+ +VF G+ G+
Sbjct: 268 PTIVGMVVFGYTSHIFLPNLEGNMKNPAQFNVMLKWSHIAAAVFKVVF-----GMLGFLT 322
Query: 96 YGDVLRGTITLNLPTEEWPAIFAKIFIALSIFFTYPLQFYVVIDIF----------TKYT 145
+G++ + I+ +LP + + I + + + +YPL FY + + T +T
Sbjct: 323 FGELTQEEISNSLPNQSFK-ILVNLILVVKALLSYPLPFYAAVQLLKNNLFLGYPQTPFT 381
Query: 146 KHHIKENYQKMAQVVARTVGVTCCVGIGIALPLLEQIINIVGAIFYSILGLVIPAIVETV 205
+ + + V R + V + + +++P L +++ +VG I ++L + PA+
Sbjct: 382 SCYSPDKSLREWAVTLRIILVLFTLFVALSVPYLVELMGLVGNITGTMLSFIWPALFHLY 441
Query: 206 FRWNDLGKFKWILWKNVLILLFGLGSLVSGCTVTIMDIIQVL 247
+ L F+ + ++I+ G +SG + M++++ +
Sbjct: 442 IKEKTLNNFEKRFDQGIIIM--GCSVCISGVYFSSMELLRAI 481
>U23518-2|AAC70884.4| 496|Caenorhabditis elegans Hypothetical
protein F21D12.3 protein.
Length = 496
Score = 51.2 bits (117), Expect = 7e-07
Identities = 47/220 (21%), Positives = 104/220 (47%), Gaps = 22/220 (10%)
Query: 45 IFAMEGIGVVMPVENSMKKPQNFLGFPSVLVVAMSTIVFLYSTLGLFGYFRYGDVLRGTI 104
+FA G V +++ MK P++F + +V LY L +F + YGD + ++
Sbjct: 244 LFAFSGHYVFPTIQHDMKNPRDFT---KSIFAGFLGVVILYLPLCIFAFVVYGDSMTDSV 300
Query: 105 TLNLPTEEWPAIFAKIFIALSIFFTYPLQFYVVIDIFTKYTKHHIKENYQ-KMAQVVART 163
++ + P++ ++ L I F + +VI+ + +H+ K ++ + +V+ RT
Sbjct: 301 IYSIQS---PSL--QLLANLMISFHCIMTLVIVINPLNQEVEHYAKISHAFGIGRVITRT 355
Query: 164 VGVTCCVGIGIALPLLEQIINIVG--------AIFYSILGLVIPAIVETVFRWNDLGKFK 215
+ + + + + +P + ++N+VG A+ S+ L A E +R + +
Sbjct: 356 IVLFLVLFVALTVPDFQPVMNLVGASTIPMGCAVLPSLFYLYSEAATEEEWRKGKIPTLR 415
Query: 216 WIL---WKNVLI--LLFGLGSLVSGCTVTIMDIIQVLKQK 250
+L K VLI L+ G+++ G + +++++K K
Sbjct: 416 EVLDRTDKTVLIINLIIIFGAILGGVLGSYQGVLKLIKAK 455
>U00055-6|AAA50724.1| 494|Caenorhabditis elegans Hypothetical
protein R02F2.8 protein.
Length = 494
Score = 50.0 bits (114), Expect = 2e-06
Identities = 40/181 (22%), Positives = 83/181 (45%), Gaps = 9/181 (4%)
Query: 33 DPARYPAFIS--TVIFAMEGIGVVMPVENSMKKPQNFLGFPSVLVVAMSTIVFLYSTLGL 90
+P AF++ T +FA G + +++ MKKP +F+ +V+A+ LY + +
Sbjct: 210 EPNLLKAFMAFGTFVFAFGGHATLPTIQHDMKKPAHFV---HSVVLAIIFCTMLYMCIAV 266
Query: 91 FGYFRYGDVLRGTITLNLPTEEWPAIFAKIFIALSIFFTYPLQFYVVIDIFTKYTKHHIK 150
GYF YG + I +L +W + IA+ + T + I + K K
Sbjct: 267 GGYFVYGSTVGEAIIPSLQI-KWIQQTVNLMIAVHVITTIVIVMSPPIQQVEQLLKVPHK 325
Query: 151 ENYQKMAQVVARTVGVTCCVGIGIALPLLEQIINIVGAIFYSILGLVIPAIVETVFRWND 210
++ + R++ + IG+++P +++++GA ++ L++P I R +
Sbjct: 326 FGVKRF---LVRSILFWFVIFIGLSIPHFGPVLDLIGASTMVLMTLILPPIFYLSIRTQE 382
Query: 211 L 211
+
Sbjct: 383 I 383
>AL021474-3|CAD54163.1| 519|Caenorhabditis elegans Hypothetical
protein Y32F6A.4 protein.
Length = 519
Score = 49.2 bits (112), Expect = 3e-06
Identities = 35/161 (21%), Positives = 77/161 (47%), Gaps = 7/161 (4%)
Query: 41 ISTVIFAMEGIGVVMPVENSMKKPQNFLGFPSVLVVAMSTIVFLYSTLGLFGYFRYGDVL 100
+ T++F++ G +++ MK+P+ F SV + A + + F+Y + + GY YGD L
Sbjct: 251 MGTLLFSVGGHSAFPTIQHDMKQPKEFTR--SVFL-AFTIMAFMYIPVCIMGYLVYGDSL 307
Query: 101 RGTITLNLPTEEWPAIFAKIFIALSIFFTYPLQFYVVIDIFTKYTKHHIKENYQKMAQVV 160
R +I ++ T W I I + T + F ++ + H+ + + +V
Sbjct: 308 RDSIIPSIQT-VWIQQAINIMITVHCILTLTIVFNPLMQEVEEL--FHVPQRFGPKRAIV 364
Query: 161 ARTVGVTCCVGIGIALPLLEQIINIVGAIFYSILGLVIPAI 201
RT + V + ++P ++++VG ++ +++P +
Sbjct: 365 -RTGIMVAVVFVAESVPTFGPLLDLVGGSTLTLTSVIMPCL 404
>AF125971-5|AAD14765.1| 484|Caenorhabditis elegans Hypothetical
protein Y4C6B.2a protein.
Length = 484
Score = 48.0 bits (109), Expect = 6e-06
Identities = 44/203 (21%), Positives = 88/203 (43%), Gaps = 18/203 (8%)
Query: 7 LVATYAICLYYIFGGGISFVDKKVAGDPARYPAF--------ISTVIFAMEGIGVVMPVE 58
+++T + IFG + D +V YP+F T++F+ G ++
Sbjct: 168 MISTTISVVLIIFG---TVQDYEVCHKEVFYPSFNFSKTLMSFGTIMFSYGGHCAFPTIQ 224
Query: 59 NSMKKPQNFLGFPSVLVVAMSTIVFLYSTLGLFGYFRYGDVLRGTITLNLPTEEWPAIFA 118
+ MKKP +F +++A I Y + + GYF YG L +I ++ I
Sbjct: 225 HDMKKPHHF---SRSIIIAFIIIFIFYLPVSMSGYFVYGSSLTDSIIPSIQNINIQTI-V 280
Query: 119 KIFIALSIFFTYPLQFYVVIDIFTKYTKHHIKENYQKMAQVVARTVGVTCCVGIGIALPL 178
I I+L + + F + F + +Q+ +VAR + + V + ++P
Sbjct: 281 NILISLHVSLALTITFNPLNQEFEEILNMSHDFGWQR---IVARALVMLSVVFVAESVPN 337
Query: 179 LEQIINIVGAIFYSILGLVIPAI 201
++++VG +++ LV+P +
Sbjct: 338 FGVLLDLVGGSTITMMALVVPIV 360
>AC024842-7|AAF59620.1| 457|Caenorhabditis elegans Hypothetical
protein Y59H11AR.4 protein.
Length = 457
Score = 43.2 bits (97), Expect = 2e-04
Identities = 33/136 (24%), Positives = 65/136 (47%), Gaps = 15/136 (11%)
Query: 2 IANVLLVATYAICLYYIFGGGISFVDKKVAGDPARYPAF--------ISTVIFAMEGIGV 53
++ V ++T +FG F+D K + YP F ++T+IFA G
Sbjct: 156 VSIVATISTVTAVALILFG---YFLDAKGCYPHSSYPDFTPTAASNSLATIIFAYGGHPC 212
Query: 54 VMPVENSMKKPQNFLGFPSVLVVAMSTIVFLYSTLGLFGYFRYGDVLRGTITLNLPTEEW 113
+ + + MK PQ++ +++ + LY+ + LFG++ YGD + +I ++ +
Sbjct: 213 IPTIVHDMKTPQHYF---RCFLLSYIALFLLYTPVSLFGFWIYGDSVSDSIISSIQNDSL 269
Query: 114 PAIFAKIFIALSIFFT 129
+ I IA+ +FF+
Sbjct: 270 RRGIS-ILIAVHVFFS 284
>AL021487-11|CAA16355.2| 330|Caenorhabditis elegans Hypothetical
protein Y45F10B.4 protein.
Length = 330
Score = 33.5 bits (73), Expect = 0.15
Identities = 23/106 (21%), Positives = 47/106 (44%), Gaps = 3/106 (2%)
Query: 57 VENSMKKPQNFLGFPSVLVVAMSTIVFLYSTLGLFGYFRYGDVLRGTITLNLPTEEWPAI 116
++ ++K + LV+ ++ + L +G F R+ G +T +E P+
Sbjct: 53 IQKGLRKNDETINQSVFLVIILTQLSCLCFFIGDFITLRFPST--GIMTSWCQQQE-PSR 109
Query: 117 FAKIFIALSIFFTYPLQFYVVIDIFTKYTKHHIKENYQKMAQVVAR 162
F + IFF YP+ Y V+ ++ H N++K+ + + R
Sbjct: 110 FLTLIFLTQIFFGYPVMIYPVLLNVVRFVPIHYPLNHKKINEKIIR 155
>AF067943-3|AAC17664.1| 266|Caenorhabditis elegans Hypothetical
protein F59B1.4 protein.
Length = 266
Score = 32.7 bits (71), Expect = 0.26
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Query: 59 NSMKKPQNFLGFPSVLVVAM-STIVFLYSTLGLFGYFRYGDVLRGTITLNLPTEEWPAIF 117
N + P NFL F ++ + T +F Y+ L +F ++ GTI NL W A
Sbjct: 25 NCLATPVNFLAFYLIIKHSRRETKLFKYTLLISHLFFYVSNIFYGTIANNLLNAFWSAAI 84
Query: 118 AKIFIALSIFFTY 130
A ++FT+
Sbjct: 85 WIFLFAGFVYFTF 97
>Z83123-8|CAB05613.2| 330|Caenorhabditis elegans Hypothetical
protein T04A11.10 protein.
Length = 330
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/52 (25%), Positives = 26/52 (50%)
Query: 111 EEWPAIFAKIFIALSIFFTYPLQFYVVIDIFTKYTKHHIKENYQKMAQVVAR 162
++ P+ F + IFF YP+ Y V+ ++ H N++K+ + + R
Sbjct: 104 QQEPSRFLTLIFLTQIFFGYPVMIYPVLLNVVRFVPIHYPLNHKKINEKILR 155
>Z79759-5|CAB02140.2| 409|Caenorhabditis elegans Hypothetical
protein ZK858.5 protein.
Length = 409
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/21 (57%), Positives = 14/21 (66%)
Query: 214 FKWILWKNVLILLFGLGSLVS 234
FKW LW+N LI F L L+S
Sbjct: 349 FKWALWRNYLIHRFSLDPLIS 369
>AL021474-5|CAA16307.2| 673|Caenorhabditis elegans Hypothetical
protein Y32F6A.2 protein.
Length = 673
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 1 MIANVLLVATYAICLYYIFGGGISFVDKKVAGDPARYPAFISTVIFAM 48
+I+ +LL+ T+ C+ FG +F + + DP Y + IF +
Sbjct: 578 VISPILLIVTFG-CIVATFGQKKAFNENSIVSDPIGYSLLVMPCIFVI 624
>Z49907-10|CAF31469.1| 844|Caenorhabditis elegans Hypothetical
protein B0491.8c protein.
Length = 844
Score = 28.3 bits (60), Expect = 5.6
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 143 KYTKHHIK-ENYQKMAQVVARTVGVTCCVGIGIALPLLEQIINIVGAIFYSILGLVIPAI 201
K H K ENY +VA+ VG+T +G G+ + ++ +GAI ++L + A
Sbjct: 131 KVIMHGFKMENYLTTRTLVAKMVGLTLAMGGGLPIGKEGPFVH-MGAIVATLLSKITSAC 189
Query: 202 VETVFRWND 210
+ F N+
Sbjct: 190 QYSAFFSNE 198
>Z49907-9|CAC42250.1| 875|Caenorhabditis elegans Hypothetical
protein B0491.8b protein.
Length = 875
Score = 28.3 bits (60), Expect = 5.6
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 143 KYTKHHIK-ENYQKMAQVVARTVGVTCCVGIGIALPLLEQIINIVGAIFYSILGLVIPAI 201
K H K ENY +VA+ VG+T +G G+ + ++ +GAI ++L + A
Sbjct: 162 KVIMHGFKMENYLTTRTLVAKMVGLTLAMGGGLPIGKEGPFVH-MGAIVATLLSKITSAC 220
Query: 202 VETVFRWND 210
+ F N+
Sbjct: 221 QYSAFFSNE 229
>Z49907-8|CAA90092.1| 880|Caenorhabditis elegans Hypothetical
protein B0491.8a protein.
Length = 880
Score = 28.3 bits (60), Expect = 5.6
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 143 KYTKHHIK-ENYQKMAQVVARTVGVTCCVGIGIALPLLEQIINIVGAIFYSILGLVIPAI 201
K H K ENY +VA+ VG+T +G G+ + ++ +GAI ++L + A
Sbjct: 162 KVIMHGFKMENYLTTRTLVAKMVGLTLAMGGGLPIGKEGPFVH-MGAIVATLLSKITSAC 220
Query: 202 VETVFRWND 210
+ F N+
Sbjct: 221 QYSAFFSNE 229
>Z48367-8|CAF31471.1| 844|Caenorhabditis elegans Hypothetical
protein B0491.8c protein.
Length = 844
Score = 28.3 bits (60), Expect = 5.6
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 143 KYTKHHIK-ENYQKMAQVVARTVGVTCCVGIGIALPLLEQIINIVGAIFYSILGLVIPAI 201
K H K ENY +VA+ VG+T +G G+ + ++ +GAI ++L + A
Sbjct: 131 KVIMHGFKMENYLTTRTLVAKMVGLTLAMGGGLPIGKEGPFVH-MGAIVATLLSKITSAC 189
Query: 202 VETVFRWND 210
+ F N+
Sbjct: 190 QYSAFFSNE 198
>Z48367-7|CAC42266.1| 875|Caenorhabditis elegans Hypothetical
protein B0491.8b protein.
Length = 875
Score = 28.3 bits (60), Expect = 5.6
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 143 KYTKHHIK-ENYQKMAQVVARTVGVTCCVGIGIALPLLEQIINIVGAIFYSILGLVIPAI 201
K H K ENY +VA+ VG+T +G G+ + ++ +GAI ++L + A
Sbjct: 162 KVIMHGFKMENYLTTRTLVAKMVGLTLAMGGGLPIGKEGPFVH-MGAIVATLLSKITSAC 220
Query: 202 VETVFRWND 210
+ F N+
Sbjct: 221 QYSAFFSNE 229
>Z48367-6|CAA88325.1| 880|Caenorhabditis elegans Hypothetical
protein B0491.8a protein.
Length = 880
Score = 28.3 bits (60), Expect = 5.6
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 143 KYTKHHIK-ENYQKMAQVVARTVGVTCCVGIGIALPLLEQIINIVGAIFYSILGLVIPAI 201
K H K ENY +VA+ VG+T +G G+ + ++ +GAI ++L + A
Sbjct: 162 KVIMHGFKMENYLTTRTLVAKMVGLTLAMGGGLPIGKEGPFVH-MGAIVATLLSKITSAC 220
Query: 202 VETVFRWND 210
+ F N+
Sbjct: 221 QYSAFFSNE 229
>AF319613-1|AAG49523.1| 880|Caenorhabditis elegans CLC-type
chloride channel CLH-2b protein.
Length = 880
Score = 28.3 bits (60), Expect = 5.6
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 143 KYTKHHIK-ENYQKMAQVVARTVGVTCCVGIGIALPLLEQIINIVGAIFYSILGLVIPAI 201
K H K ENY +VA+ VG+T +G G+ + ++ +GAI ++L + A
Sbjct: 162 KVIMHGFKMENYLTTRTLVAKMVGLTLAMGGGLPIGKEGPFVH-MGAIVATLLSKITSAC 220
Query: 202 VETVFRWND 210
+ F N+
Sbjct: 221 QYSAFFSNE 229
>AF173171-1|AAF13164.1| 844|Caenorhabditis elegans CLC chloride
channel protein protein.
Length = 844
Score = 28.3 bits (60), Expect = 5.6
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 143 KYTKHHIK-ENYQKMAQVVARTVGVTCCVGIGIALPLLEQIINIVGAIFYSILGLVIPAI 201
K H K ENY +VA+ VG+T +G G+ + ++ +GAI ++L + A
Sbjct: 131 KVIMHGFKMENYLTTRTLVAKMVGLTLAMGGGLPIGKEGPFVH-MGAIVATLLSKITSAC 189
Query: 202 VETVFRWND 210
+ F N+
Sbjct: 190 QYSAFFSNE 198
>Z70037-3|CAC42352.1| 902|Caenorhabditis elegans Hypothetical
protein T27D12.2b protein.
Length = 902
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 151 ENYQKMAQVVARTVGVTCCVGIGIALPLLEQIINIVGAIFYSILGLVIPAIVETVFRWND 210
+NY ++A+ +G+T +G G+ + ++I GAI S+L V A F N+
Sbjct: 212 KNYLSGKTLIAKMIGLTLTIGSGLPVGKEGPFVHI-GAIVASLLNKVTAACQYNAFFSNE 270
>Z70037-2|CAA93879.2| 906|Caenorhabditis elegans Hypothetical
protein T27D12.2a protein.
Length = 906
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 151 ENYQKMAQVVARTVGVTCCVGIGIALPLLEQIINIVGAIFYSILGLVIPAIVETVFRWND 210
+NY ++A+ +G+T +G G+ + ++I GAI S+L V A F N+
Sbjct: 212 KNYLSGKTLIAKMIGLTLTIGSGLPVGKEGPFVHI-GAIVASLLNKVTAACQYNAFFSNE 270
>D84668-1|BAA86913.1| 902|Caenorhabditis elegans CLH-1 protein.
Length = 902
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 151 ENYQKMAQVVARTVGVTCCVGIGIALPLLEQIINIVGAIFYSILGLVIPAIVETVFRWND 210
+NY ++A+ +G+T +G G+ + ++I GAI S+L V A F N+
Sbjct: 212 KNYLSGKTLIAKMIGLTLTIGSGLPVGKEGPFVHI-GAIVASLLNKVTAACQYNAFFSNE 270
>AF173170-1|AAF13163.1| 868|Caenorhabditis elegans CLC chloride
channel protein protein.
Length = 868
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 151 ENYQKMAQVVARTVGVTCCVGIGIALPLLEQIINIVGAIFYSILGLVIPAIVETVFRWND 210
+NY ++A+ +G+T +G G+ + ++I GAI S+L V A F N+
Sbjct: 174 KNYLSGKTLIAKMIGLTLTIGSGLPVGKEGPFVHI-GAIVASLLNKVTAACQYNAFFSNE 232
>Z81533-3|CAB04335.1| 327|Caenorhabditis elegans Hypothetical
protein F36G9.5 protein.
Length = 327
Score = 27.5 bits (58), Expect = 9.7
Identities = 18/107 (16%), Positives = 43/107 (40%), Gaps = 3/107 (2%)
Query: 120 IFIALSIFFTYPLQFYVVIDIFTKYTKHHIKENYQKMAQVVARTVGVTCCVGIGIALPLL 179
IFI + + Y + + + +YQK+ + + + + I + + ++
Sbjct: 114 IFIIIVFYINYATMIFPCLVALLRLNLIVFPSSYQKINTKIIKCLPIVFIYPI-LCIAIM 172
Query: 180 EQIINIVGAIFYSILGLVIPAIVETVFRW--NDLGKFKWILWKNVLI 224
+ Y I G ++ + +T+F W N + F LW ++ +
Sbjct: 173 FPGNGFCSHVAYPIYGSIMLRVTDTMFGWTNNYILMFNTFLWVSICL 219
>AF026215-1|AAB71319.1| 352|Caenorhabditis elegans Serpentine
receptor, class h protein83 protein.
Length = 352
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Query: 7 LVATYAICLYYIFGGGISFVDKKVAGDPARYPAFISTVIFAMEGIGVVMP 56
+V A C+YY+F SF KK +Y F S ++ +G +MP
Sbjct: 219 IVFFLACCVYYLFVSVRSFASKKTRQMQVKY--FASIILQISIPMGFMMP 266
>AC006617-11|AAF39766.2| 356|Caenorhabditis elegans Serpentine
receptor, class z protein56 protein.
Length = 356
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/65 (21%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 178 LLEQIINIVGAIFYSILGLVIPAIVETVFRWNDLGKFKWILWKNVLILLFGLGSLVSGCT 237
+L I+ I+ A+ Y + + + + + + K+I W+ +++++F L SLV T
Sbjct: 194 MLGYILLIISALLYLPIMISVRKLSHLASAQENKPQ-KYIFWQTMIVVIFQLISLVQSLT 252
Query: 238 VTIMD 242
+ +++
Sbjct: 253 LVLIN 257
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.330 0.146 0.447
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,768,549
Number of Sequences: 27539
Number of extensions: 235375
Number of successful extensions: 878
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 846
Number of HSP's gapped (non-prelim): 34
length of query: 252
length of database: 12,573,161
effective HSP length: 80
effective length of query: 172
effective length of database: 10,370,041
effective search space: 1783647052
effective search space used: 1783647052
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 58 (27.5 bits)
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