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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001146-TA|BGIBMGA001146-PA|IPR011701|Major facilitator
superfamily MFS_1
         (384 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC947.06c |||spermidine family transporter |Schizosaccharomyce...    33   0.051
SPBC36.03c |||spermidine family transporter |Schizosaccharomyces...    32   0.12 
SPBC409.08 |||spermine family transporter |Schizosaccharomyces p...    32   0.16 
SPBC32H8.06 |mug93||TPR repeat protein, meiotically spliced|Schi...    29   1.1  
SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr 1|...    29   1.5  
SPAC3G9.09c |tif211||translation initiation factor eIF2 alpha su...    27   4.4  
SPBC36.01c |||spermidine family transporter |Schizosaccharomyces...    27   4.4  
SPCC4B3.09c |||mitochondrial ribosomal protein subunit L12|Schiz...    26   7.8  
SPCC188.03 |cnd3||condensin subunit Cnd3 |Schizosaccharomyces po...    26   7.8  

>SPBC947.06c |||spermidine family transporter |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 498

 Score = 33.5 bits (73), Expect = 0.051
 Identities = 19/69 (27%), Positives = 33/69 (47%)

Query: 56  GAGFGVMIPVSFTAFNSYFTKKRTTMMSANQTMSSLASITFPMLVTYLLSEYGLRWTLAL 115
           GAGF V+           FTK   + ++AN    S+ + TFP+    +  + G+ W  +L
Sbjct: 406 GAGFFVIFQGCLNYLVDTFTKFAASAIAANTFTRSIFAGTFPLFSEIMFKKLGVHWGGSL 465

Query: 116 IMAIDLHLL 124
           +  I L ++
Sbjct: 466 VGFIALGMI 474


>SPBC36.03c |||spermidine family transporter |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 538

 Score = 32.3 bits (70), Expect = 0.12
 Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 3/93 (3%)

Query: 25  LVGAGLFILGDILTIFVTRTYQLVFTF-GVIRGAGFGVMIPVSFTAFNSYFTKKRTTMMS 83
           L  AG+F L    + + T  + +V T  G++ G G   +   S       +  +  ++++
Sbjct: 417 LFPAGIFWLA--WSGYYTHVHWIVPTLSGLLTGCGILTIFMQSLIYLIDAYLFRAASVIA 474

Query: 84  ANQTMSSLASITFPMLVTYLLSEYGLRWTLALI 116
           AN  M SL +  FP+    +    G+ W  +L+
Sbjct: 475 ANTIMRSLVAAGFPLFAVQMFHNMGIGWAGSLL 507


>SPBC409.08 |||spermine family transporter |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 539

 Score = 31.9 bits (69), Expect = 0.16
 Identities = 22/101 (21%), Positives = 44/101 (43%), Gaps = 4/101 (3%)

Query: 20  FRQVGLVGAGLFILGDILTIFVTRTYQLVFTFGVIRGAGFGVMIPVSFTAFNSY----FT 75
           +R VG+  A  FI   +L    T   +L++      GA FG  + + + + N+Y    + 
Sbjct: 409 WRLVGMCIASPFIPTGLLIFAWTSFPRLIWIGPAFSGAPFGYGMVLFYFSANNYLIDVYQ 468

Query: 76  KKRTTMMSANQTMSSLASITFPMLVTYLLSEYGLRWTLALI 116
               + ++A   + S     FP+ + Y++     +W   L+
Sbjct: 469 NYCASALAAKTMVRSAGGAAFPLFIDYMMDGMTRQWAFFLL 509


>SPBC32H8.06 |mug93||TPR repeat protein, meiotically
           spliced|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 383

 Score = 29.1 bits (62), Expect = 1.1
 Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 9/57 (15%)

Query: 108 GLRWTLALIMAIDLHLLFAMIVMHPVE--------WHLVKTNENNTELTSKCEVINV 156
           GL W  + ++   LH+  A I++H  +        WH+ K   NNT+L+S+ E+  +
Sbjct: 322 GLPW-FSFVVQHCLHITAAQILLHIPDIQEEEFRNWHVSKKPINNTDLSSEFEIAEI 377


>SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1402

 Score = 28.7 bits (61), Expect = 1.5
 Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 8/108 (7%)

Query: 150 KCEVINVKKVEAFDEAVVKMLPGDDKECEERETRVKKRESIQKHIIKTIYENIDLDLLKD 209
           KC +  V   EAF EA+  M   + K+ E  E  ++K+  I++  ++ I +   +  + D
Sbjct: 583 KCTINGVAYGEAFTEAMAGMAKREGKDTE--ELTLQKQSFIERDRMQMISQ---MRNMHD 637

Query: 210 PRFV--STLVGVGFAFVSDVTYLAMEPTLLFSYKFTKIEVASCVMVGA 255
            +++    L  +   FV D+   A E   L  Y+F  + +A C  V A
Sbjct: 638 NKYLVDDNLTFISSQFVHDLAGKAGEEQSLACYEFF-LALALCHSVVA 684


>SPAC3G9.09c |tif211||translation initiation factor eIF2 alpha
           subunit|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 306

 Score = 27.1 bits (57), Expect = 4.4
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 3/56 (5%)

Query: 153 VINVKKVEAF-DEAVVKMLPGDDKECEERETRVKKRESIQKHIIKTIYENIDLDLL 207
           V+ V K + + D +  ++ P D  +CEER  + K   SI +HI +    N+ L+ +
Sbjct: 73  VLRVDKEKGYIDLSKRRVSPEDVVKCEERFNKSKAVHSIMRHIAEK--HNVPLETM 126


>SPBC36.01c |||spermidine family transporter |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 580

 Score = 27.1 bits (57), Expect = 4.4
 Identities = 21/93 (22%), Positives = 41/93 (44%), Gaps = 3/93 (3%)

Query: 25  LVGAGLFILGDILTIFVTRTYQLVFTF-GVIRGAGFGVMIPVSFTAFNSYFTKKRTTMMS 83
           L  AG+F L    + + T  + +V T  G++ GAG  ++           +  +  ++ +
Sbjct: 459 LFPAGIFWLA--WSGYYTYVHWIVPTLSGLLTGAGILLIFLQCLNYLLDAYLFRAASVFA 516

Query: 84  ANQTMSSLASITFPMLVTYLLSEYGLRWTLALI 116
           AN  M S  +  FP+    +    G+ W  +L+
Sbjct: 517 ANVIMRSAVAGGFPLFAVQMFHNMGVGWAGSLL 549


>SPCC4B3.09c |||mitochondrial ribosomal protein subunit
           L12|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 206

 Score = 26.2 bits (55), Expect = 7.8
 Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 8/87 (9%)

Query: 137 LVKTNENNTELTSKCEVINVKKVEAFDEAVVKMLPGDDKECEERE----TRVKKRESI-- 190
           L++T+E   +L  K  +  +  + A   AV    P ++K  EE++    T   K ES   
Sbjct: 89  LLETSELVKQLKEKLNIAEIAPMAAVAPAVASAAPSEEKAPEEKKEEKTTWNLKLESFDA 148

Query: 191 --QKHIIKTIYENIDLDLLKDPRFVST 215
             +  +IK +   + L L+   +FV +
Sbjct: 149 GSKAKVIKEVKSLLGLSLVDAKKFVES 175


>SPCC188.03 |cnd3||condensin subunit Cnd3 |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 875

 Score = 26.2 bits (55), Expect = 7.8
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)

Query: 230 LAMEPTLLFSYKFTKIEVA-SCVMVGAVSDLLARFGLAIFTYFYAVDSRLLF 280
           LA E   L+ + + K  V   C  +  ++D+L + G A FT +    S +LF
Sbjct: 555 LAFENVPLYLHCYEKGSVVLKCTAIRTLTDMLIQHGKAKFTEYEDAISSILF 606


  Database: spombe
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.328    0.141    0.408 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,581,200
Number of Sequences: 5004
Number of extensions: 62192
Number of successful extensions: 232
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 229
Number of HSP's gapped (non-prelim): 9
length of query: 384
length of database: 2,362,478
effective HSP length: 74
effective length of query: 310
effective length of database: 1,992,182
effective search space: 617576420
effective search space used: 617576420
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 55 (26.2 bits)

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