Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001146-TA|BGIBMGA001146-PA|IPR011701|Major facilitator
superfamily MFS_1
(384 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0531 + 4576497-4576855,4577023-4577110,4585157-4585678,458... 35 0.13
05_05_0059 + 22011168-22011662,22012668-22012894,22013029-220133... 34 0.17
03_06_0517 + 34466743-34466879,34468478-34468588,34468997-344690... 33 0.51
01_01_0857 - 6693460-6693991,6695086-6695165,6695508-6697448 30 2.7
07_03_0266 - 16015949-16016524,16016746-16016782,16017274-160178... 30 3.6
06_01_0421 - 3000486-3000595,3000909-3001148,3001659-3001722,300... 29 4.7
05_01_0484 - 4033169-4033867,4033988-4034051,4035720-4035839,403... 29 4.7
08_01_0370 + 3275771-3275789,3275972-3276976,3277062-3277624 29 6.3
>05_01_0531 +
4576497-4576855,4577023-4577110,4585157-4585678,
4586441-4586545
Length = 357
Score = 34.7 bits (76), Expect = 0.13
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 128 IVMHPVEWHLVKTNENNTELTSKCEVINVKKVEAFDEAVVKMLPGDDKECEERETRVKK- 186
++M+ ++ L ++ T T K I+V K + + AVV+++ GD+ EER R K+
Sbjct: 249 LIMNALKVGLAVGVQSITNRTMKAHEISVVKRDQIERAVVELM-GDETGAEERRARAKEL 307
Query: 187 RESIQKHIIK-TIYENIDL 204
+E +K I + + Y NI L
Sbjct: 308 KEKARKAIDEGSSYNNIVL 326
>05_05_0059 +
22011168-22011662,22012668-22012894,22013029-22013377,
22013464-22013508,22013589-22013735,22013851-22013988,
22014126-22014159,22014258-22014430
Length = 535
Score = 34.3 bits (75), Expect = 0.17
Identities = 26/117 (22%), Positives = 50/117 (42%), Gaps = 2/117 (1%)
Query: 5 VYSGFLGGIALKKYSFRQVGLVGAGLFILGDILTIF-VTRTYQLVFTFGVIRGAGFGVMI 63
V+S +GG +Y ++V A L+ L LT + +++ ++ + G GV
Sbjct: 173 VFSSMVGGALADRYGGKKVMAGAAALWSLATFLTPWAASQSTIMLLAIRALFGLAEGVAF 232
Query: 64 PVSFTAFNSYF-TKKRTTMMSANQTMSSLASITFPMLVTYLLSEYGLRWTLALIMAI 119
P T +F T +R T + + L ++ + ++S GL T A ++
Sbjct: 233 PTMSTFLPKWFPTHERATAVGISMGGFHLGNVISFLATPIIMSHIGLAGTFAFFASL 289
>03_06_0517 +
34466743-34466879,34468478-34468588,34468997-34469079,
34469287-34469404,34469503-34469714,34470167-34470651,
34470731-34470801,34470898-34470955,34471161-34471192,
34471193-34471449,34471820-34471974,34472353-34472636,
34472725-34472842,34473574-34473756,34473848-34474162
Length = 872
Score = 32.7 bits (71), Expect = 0.51
Identities = 23/89 (25%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 162 FDEAVVKMLPGDDKECEERETRVKKRESIQKHIIKT-IYENIDLDLLKDPRFVSTLVGVG 220
+D+ V + + GD+ E++ + + SI HI+ T + +ID D +++ ++ V
Sbjct: 346 YDDYVDETMWGDEDWKEQQHEKAEDYVSIDAHILSTPVIADIDRDGIQE-----MVISVS 400
Query: 221 FAFVSDVTYLAMEPTLLFSYKFTKIEVAS 249
+ F D+ Y LLFS ++ V S
Sbjct: 401 YFFDHDLGYFFKTRILLFSLILGRLTVTS 429
>01_01_0857 - 6693460-6693991,6695086-6695165,6695508-6697448
Length = 850
Score = 30.3 bits (65), Expect = 2.7
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Query: 341 ILFSGVLMLIAD---PLIDIEDVYSSRYTEEKAKKQTLLK 377
I F VL+ AD P++D+ED+Y SRY +KK LK
Sbjct: 448 ISFCDVLLKSADGSMPVVDLEDLYFSRYA-ATSKKMRFLK 486
>07_03_0266 -
16015949-16016524,16016746-16016782,16017274-16017884,
16018004-16018081,16018117-16018143
Length = 442
Score = 29.9 bits (64), Expect = 3.6
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 252 MVGAVSDLLARFGLAIFTYFYAVDSRLLFFIGTCVTVFLRIALV 295
++ + +A F A F A D RL+ F+GT V V+ + +V
Sbjct: 193 LISNMMTAVALFAAATFALCVADDYRLMAFVGTVVAVYAAVTVV 236
>06_01_0421 -
3000486-3000595,3000909-3001148,3001659-3001722,
3001969-3002274,3002365-3002579,3003047-3003341,
3003487-3003651,3003745-3004341,3004855-3004941,
3005022-3005342,3006218-3008242
Length = 1474
Score = 29.5 bits (63), Expect = 4.7
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 164 EAVVKMLP-GDDKECEERETRVKKRESIQKHIIKTIYENIDLDLLKDP 210
E + MLP GD + ER + + + + + +Y+N D+ LL DP
Sbjct: 721 EKDLAMLPHGDSTQIGERGVNLSGGQKQRVQLARALYQNADIYLLDDP 768
>05_01_0484 -
4033169-4033867,4033988-4034051,4035720-4035839,
4036631-4036827,4037000-4037170,4037292-4037432,
4037519-4037602,4037852-4037989,4038111-4038136,
4038292-4038346,4039094-4039198,4039303-4039371,
4040038-4040112
Length = 647
Score = 29.5 bits (63), Expect = 4.7
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 252 MVGAVSDLLARFGLAIFTYFYAVDSRLLFFIGTCVTVFLRIALV 295
++ + +A F A F A D RL+ F+GT V V+ + +V
Sbjct: 576 LIANMMTAVALFAAATFALCAADDYRLMAFVGTVVAVYAAVTVV 619
>08_01_0370 + 3275771-3275789,3275972-3276976,3277062-3277624
Length = 528
Score = 29.1 bits (62), Expect = 6.3
Identities = 31/147 (21%), Positives = 67/147 (45%), Gaps = 6/147 (4%)
Query: 6 YSGFLGGIALKKYSFRQVGLVGAGLF--ILGDILTIFVTRTYQLVFTFGVIRGAGFGVMI 63
++G LG + F +G+ G +F + G + + Y + +I G +
Sbjct: 138 FAGHLGD-RMDLRIFLTIGMFGTAVFTALFGAGYWLNIHNFYYFL-VIQMIAGLFQAIGW 195
Query: 64 PVSFTAFNSYFTK-KRTTMMSANQTMSSLASITFPMLVTYLLSEYGLRWTLALIMAIDLH 122
P ++F K KR +M +S+ +I+ +L +LL ++G W+ A+ I +
Sbjct: 196 PSVVAIVGNWFGKSKRGLIMGIWNAHTSVGNISGSLLAAFLL-KFGWGWSFAIPSLIMVA 254
Query: 123 LLFAMIVMHPVEWHLVKTNENNTELTS 149
+ + V PV +++ + ++ E++S
Sbjct: 255 VGLLVFVFLPVSPEVMEIDIDDGEISS 281
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.328 0.141 0.408
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,588,618
Number of Sequences: 37544
Number of extensions: 365091
Number of successful extensions: 1084
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1082
Number of HSP's gapped (non-prelim): 8
length of query: 384
length of database: 14,793,348
effective HSP length: 83
effective length of query: 301
effective length of database: 11,677,196
effective search space: 3514835996
effective search space used: 3514835996
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 61 (28.7 bits)
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