GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001146-TA|BGIBMGA001146-PA|IPR011701|Major facilitator
superfamily MFS_1
         (384 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            25   3.5  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   8.1  

>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 25.0 bits (52), Expect = 3.5
 Identities = 11/28 (39%), Positives = 17/28 (60%)

Query: 243 TKIEVASCVMVGAVSDLLARFGLAIFTY 270
           T + V +CV+V  V+ L+A   L  +TY
Sbjct: 841 THMIVLTCVIVSVVACLVAALSLVYYTY 868


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.8 bits (49), Expect = 8.1
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)

Query: 52   GVIRGAGFGVMIPVSFTAFNSYFTKKRTTMMSANQTMSSLASITF 96
            G+I GA  G+ IP + TA  +YF     ++ ++   M   + ITF
Sbjct: 2766 GMIGGALTGLSIPFNLTASIAYFVGMGLSLSASIGVMIG-SGITF 2809


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.328    0.141    0.408 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 343,622
Number of Sequences: 2123
Number of extensions: 13027
Number of successful extensions: 28
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 26
Number of HSP's gapped (non-prelim): 3
length of query: 384
length of database: 516,269
effective HSP length: 65
effective length of query: 319
effective length of database: 378,274
effective search space: 120669406
effective search space used: 120669406
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 49 (23.8 bits)