GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001146-TA|BGIBMGA001146-PA|IPR011701|Major facilitator
superfamily MFS_1
         (384 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding prote...    23   4.4  
DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channe...    22   7.7  

>AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding protein
           ASP6 protein.
          Length = 146

 Score = 23.0 bits (47), Expect = 4.4
 Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 2/30 (6%)

Query: 345 GVLMLIADPLI--DIEDVYSSRYTEEKAKK 372
           GV +L+A  L+   IED  S + T E+AKK
Sbjct: 5   GVSLLVALLLVLLAIEDTMSKKMTIEEAKK 34


>DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channel
           protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 7.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)

Query: 107 YGLRWTLALIMAIDLH 122
           YG+R+T  L   +DLH
Sbjct: 151 YGMRFTTTLACMMDLH 166


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.328    0.141    0.408 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,575
Number of Sequences: 429
Number of extensions: 3676
Number of successful extensions: 11
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 2
length of query: 384
length of database: 140,377
effective HSP length: 59
effective length of query: 325
effective length of database: 115,066
effective search space: 37396450
effective search space used: 37396450
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 45 (22.2 bits)