Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001145-TA|BGIBMGA001145-PA|IPR011701|Major facilitator
superfamily MFS_1
         (505 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    23   3.8  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    23   3.8  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   6.6  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   6.6  

>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 23.4 bits (48), Expect = 3.8
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 204 DEENEDKFEINPLVTHPMPKLTTQRSHSN 232
           D++N+D   +  L+T P  K T    + N
Sbjct: 117 DKKNDDSPALRALLTRPQAKKTPPNQYEN 145


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 23.4 bits (48), Expect = 3.8
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 204 DEENEDKFEINPLVTHPMPKLTTQRSHSN 232
           D++N+D   +  L+T P  K T    + N
Sbjct: 117 DKKNDDSPALRALLTRPQAKKTPPNQYEN 145


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 6.6
 Identities = 8/20 (40%), Positives = 12/20 (60%)

Query: 160 ILGALAFNAVVGSCLLQPIK 179
           ++ ALAF  ++ SC   P K
Sbjct: 87  LIVALAFQVILNSCFCDPAK 106


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 6.6
 Identities = 8/20 (40%), Positives = 12/20 (60%)

Query: 160 ILGALAFNAVVGSCLLQPIK 179
           ++ ALAF  ++ SC   P K
Sbjct: 87  LIVALAFQVILNSCFCDPAK 106


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.323    0.137    0.409 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,336
Number of Sequences: 317
Number of extensions: 4299
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 4
length of query: 505
length of database: 114,650
effective HSP length: 60
effective length of query: 445
effective length of database: 95,630
effective search space: 42555350
effective search space used: 42555350
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 45 (22.2 bits)