Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001145-TA|BGIBMGA001145-PA|IPR011701|Major facilitator
superfamily MFS_1
(505 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter Itr1|Schizo... 33 0.12
SPBC1271.10c |||membrane transporter|Schizosaccharomyces pombe|c... 32 0.21
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 32 0.21
SPAC11D3.18c |||nicotinic acid plasma membrane transporter |Schi... 31 0.28
SPBC12C2.13c |fnx1|SPBC21D10.04c|MFS multidrug efflux transporte... 29 1.5
SPAC6G9.15c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 28 2.6
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 28 2.6
SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces ... 27 4.6
SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3 Brl2|Schizosa... 27 6.1
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 27 6.1
SPBC947.11c |elg1||DNA replication factor C complex subunit Elg1... 27 8.1
>SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter
Itr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 575
Score = 32.7 bits (71), Expect = 0.12
Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 2/92 (2%)
Query: 37 GASFIASTLDSVVNFSGFFVGPVIKTFSYRKVCFVGSTICALGLLFTAPAKSIGHILATY 96
G FI S G G + F + V + S I +G + A + H++
Sbjct: 128 GKEFITSATSLGALLGGIIAGALADFFGRKPVIAIASIIIIVGSIVQVTAHHLWHMIVGR 187
Query: 97 SILGGFGVGLASSSSFVSLNHYF-SKKRGQAV 127
++ G+GVG+AS + L+ SK RG+ V
Sbjct: 188 FVI-GWGVGIASLIIPLYLSEIAPSKIRGRLV 218
>SPBC1271.10c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 581
Score = 31.9 bits (69), Expect = 0.21
Identities = 23/115 (20%), Positives = 43/115 (37%)
Query: 42 ASTLDSVVNFSGFFVGPVIKTFSYRKVCFVGSTICALGLLFTAPAKSIGHILATYSILGG 101
A L V + + P + R V V LG ++ A K+ + + + +G
Sbjct: 100 AGVLFICVGYFTYLAMPATFLYGRRCVYLVCLLFGMLGSMWFALVKTTSNSIGNQAFIGI 159
Query: 102 FGVGLASSSSFVSLNHYFSKKRGQAVGLSMAGTGFGLMVMPQLVKLLLGEYGFRW 156
+ + F +F +RG +G+ + T G + P + G+RW
Sbjct: 160 SEACAEALTQFSVSEVFFEHERGIKIGIYILSTSVGTYLGPLAAGYIASSQGWRW 214
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 31.9 bits (69), Expect = 0.21
Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 20/175 (11%)
Query: 171 GSCLLQPIKRHLKEVPVDAEMQNIKEMECIMESDEENEDKFEINPLVTHPMPKLTTQRSH 230
G LQP+K L+++P+D EM+ I EM+ E D +P + KL +
Sbjct: 215 GDAQLQPVK--LQQMPMDKEMEKIVEMDLEEEDMMHQNDPNNQSPKLLKEFRKLHEPNAE 272
Query: 231 SNMNHPSVRTIGMTRAKTCD-----KPLQDFEKNSKVYPGLTTAASVGVMPRVTSSGSMN 285
+ PS I + K D + ++D+ K + P + SV + ++ +MN
Sbjct: 273 ---DAPSRDYIPLPPHKGVDILSEVEAVKDWSKRLHLGP-RASLPSVCMYTFHHTNNNMN 328
Query: 286 EAARRRKVSVISNISNMDFTGSYLQLYLDTADEEAIQMKTIKKAEPVSEKKGFIR 340
A + S S + F SY++L+ AD+ K++ K+ V + G +R
Sbjct: 329 CA----EFSPDSTMIACGFQESYIRLWSIKADK-----KSLPKSTSVEDSDGSVR 374
>SPAC11D3.18c |||nicotinic acid plasma membrane transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 498
Score = 31.5 bits (68), Expect = 0.28
Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 6/109 (5%)
Query: 66 RKVCFVGSTICALGLLFTAPAKSIGHILATYSILGGFGVGLASSSSFVSLNHYFSKKRGQ 125
R + F+ S ++ +LF+ S G ++AT ILG L + + HY K++ Q
Sbjct: 127 RMLAFI-SFAWSMTVLFSGFMSSYGGLIATRLILGLLEGCLFPALNLYLTTHYTRKEQCQ 185
Query: 126 AVGLSMAGTG----FGLMVMPQLVKLLLG-EYGFRWTVVILGALAFNAV 169
+ A G FG + L ++ G + G++W ++ G ++F V
Sbjct: 186 RLSYLFASAGLAGAFGGLFAYALEQVHAGNKEGWQWIYIVEGLVSFIGV 234
>SPBC12C2.13c |fnx1|SPBC21D10.04c|MFS multidrug efflux
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 531
Score = 29.1 bits (62), Expect = 1.5
Identities = 22/99 (22%), Positives = 42/99 (42%)
Query: 57 GPVIKTFSYRKVCFVGSTICALGLLFTAPAKSIGHILATYSILGGFGVGLASSSSFVSLN 116
G + F R + LG + ++S+ + ++ G G GL + SS +S +
Sbjct: 87 GRLSDIFGRRPTVVFANAAFTLGTFWCGISRSLPELCMARALAGIGGGGLGTMSSIISSD 146
Query: 117 HYFSKKRGQAVGLSMAGTGFGLMVMPQLVKLLLGEYGFR 155
++RG G++ G G + L L+ +G+R
Sbjct: 147 IVSLRERGTWQGITNIVWGIGGSLGGPLGGLIAQRWGWR 185
>SPAC6G9.15c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 498
Score = 28.3 bits (60), Expect = 2.6
Identities = 24/100 (24%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 203 SDEENEDKFEINPLVTHPMPKLTTQRSHSNMNHPSVRTIGMTRAKTCDKPLQDFEKNSKV 262
+ +++E N L HP+ +T+ S + N V T + KPL + + +
Sbjct: 88 ASDDSEASLAENDL--HPLDNDSTRTSKTLKNSSEVLTASKLTDEGNSKPLLEEGEVAVS 145
Query: 263 YPGLTTAASVGVMPRVTSSGSMNEAARRRKVSVISNISNM 302
P L + V + +S + +A + +K S S+I+NM
Sbjct: 146 SPILLDSKDVIMGVTKSSKNLVEDAHKSKKASTNSSINNM 185
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 28.3 bits (60), Expect = 2.6
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Query: 213 INPLVTHPMPKLTTQRSHSNMNHPSVRTIGMTRAKTCDKPLQD-FEKNSKVYP-GLTTAA 270
I P HP+P +T + + P + + M RA P++ F S P ++ +
Sbjct: 843 ITPADVHPLPPPSTSTTAGWNDAPMLGQLPMRRAAPSMAPVRSPFPGASSAQPAAMSRTS 902
Query: 271 SVGVMPRVTSSGSMNEAA 288
SV +P + SM +A
Sbjct: 903 SVSTLPPPPPTASMTASA 920
>SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 557
Score = 27.5 bits (58), Expect = 4.6
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 367 WSGELQFRMLTPFFISNLGYNMDDTAFCLSMTA 399
W G TPF +++G+ + C++MT+
Sbjct: 412 WLGNFMVSFFTPFISNSIGFKLGYIYACINMTS 444
>SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3
Brl2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 680
Score = 27.1 bits (57), Expect = 6.1
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 310 QLYLDTADEEA-IQMKTIKKAEPVSEKKGFIR-RFIDLMDLDLLKDWS 355
++Y D DE A ++ ++K + V+ ++ + R +DL DL+L KD S
Sbjct: 383 KVYKDKLDELANLETMVLEKKKAVATREAANKIRLVDLNDLELQKDLS 430
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 27.1 bits (57), Expect = 6.1
Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 5/100 (5%)
Query: 192 QNIKEMECIMESDE-ENEDKFEINPLVTHPMPKLTTQRSHSNMNHPSVRTIGMTRAKTCD 250
+ IK +E + S + +NE L+ L T RS ++ S I + K+ D
Sbjct: 587 EQIKNLESELNSSKIKNESLLNERNLLKE---MLATSRSSILSHNSSAGNID-DKMKSID 642
Query: 251 KPLQDFEKNSKVYPGLTTAASVGVMPRVTSSGSMNEAARR 290
+ ++ EKN +VY TA + R S EA R+
Sbjct: 643 ESTRELEKNYEVYRNEMTAIQESLSKRNQDLLSEMEAIRK 682
>SPBC947.11c |elg1||DNA replication factor C complex subunit
Elg1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 920
Score = 26.6 bits (56), Expect = 8.1
Identities = 15/40 (37%), Positives = 20/40 (50%)
Query: 205 EENEDKFEINPLVTHPMPKLTTQRSHSNMNHPSVRTIGMT 244
EE +D E NP V+ KLT+ + + M V IG T
Sbjct: 400 EEEDDSDEFNPSVSRKKAKLTSSQFSNWMLVTGVTGIGKT 439
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.323 0.137 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,122,327
Number of Sequences: 5004
Number of extensions: 84500
Number of successful extensions: 259
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 253
Number of HSP's gapped (non-prelim): 13
length of query: 505
length of database: 2,362,478
effective HSP length: 76
effective length of query: 429
effective length of database: 1,982,174
effective search space: 850352646
effective search space used: 850352646
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 56 (26.6 bits)
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