GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001145-TA|BGIBMGA001145-PA|IPR011701|Major facilitator
superfamily MFS_1
         (505 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    27   0.89 
Z22930-5|CAA80517.1|  275|Anopheles gambiae trypsin protein.           24   8.3  

>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 27.5 bits (58), Expect = 0.89
 Identities = 13/61 (21%), Positives = 32/61 (52%), Gaps = 1/61 (1%)

Query: 175  LQPIKRHLKEVPVDAEMQNIKEMECIMESDEENEDKFEINPLVTHPMPKLTTQRSHSNMN 234
            LQPI++ L+ +    + Q +++ +   +  ++   + + + L  H  P+L+    HS+ +
Sbjct: 1290 LQPIQQPLQTLQHQYQQQ-LQQQQQQQQQQQQQHQQHQQHQLQHHHQPQLSQSSHHSSSS 1348

Query: 235  H 235
            H
Sbjct: 1349 H 1349


>Z22930-5|CAA80517.1|  275|Anopheles gambiae trypsin protein.
          Length = 275

 Score = 24.2 bits (50), Expect = 8.3
 Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 5/61 (8%)

Query: 67  KVCFVGSTICALGLLFTAPAKSIGHILATYSILGGFGVGLASSSSFVSLNHYFSKKRGQA 126
           +V     ++ AL      P   +GH      I+GGF + ++ +   VSL ++ S + G +
Sbjct: 23  RVALKHRSVQALPRFLPRPQYDVGH-----RIVGGFEIDVSETPYQVSLQYFNSHRCGGS 77

Query: 127 V 127
           V
Sbjct: 78  V 78


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.323    0.137    0.409 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 454,771
Number of Sequences: 2123
Number of extensions: 16707
Number of successful extensions: 21
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 21
Number of HSP's gapped (non-prelim): 2
length of query: 505
length of database: 516,269
effective HSP length: 67
effective length of query: 438
effective length of database: 374,028
effective search space: 163824264
effective search space used: 163824264
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 50 (24.2 bits)