GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001145-TA|BGIBMGA001145-PA|IPR011701|Major facilitator
superfamily MFS_1
         (505 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     24   3.4  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    24   3.4  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    23   5.9  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    23   7.8  
AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-lik...    23   7.8  

>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 23.8 bits (49), Expect = 3.4
 Identities = 15/51 (29%), Positives = 24/51 (47%)

Query: 283 SMNEAARRRKVSVISNISNMDFTGSYLQLYLDTADEEAIQMKTIKKAEPVS 333
           S+N A    + + ++NI +MD T   L L L   D   +    I  +E +S
Sbjct: 493 SLNNAVGEMEATNVTNILSMDNTQYNLDLSLPQLDSTELADLDISLSENLS 543


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 23.8 bits (49), Expect = 3.4
 Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 4/40 (10%)

Query: 332 VSEKKG--FIRRFIDLMDLD--LLKDWSFLNLILGLALFW 367
           +S  KG  FI + I   D D  +++DW F+ ++L     W
Sbjct: 448 ISALKGVRFIAQHIKNADKDNEVIEDWKFVAMVLDRLFLW 487


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 13/38 (34%), Positives = 17/38 (44%)

Query: 56  VGPVIKTFSYRKVCFVGSTICALGLLFTAPAKSIGHIL 93
           VGP    F +    F GS +  LG   T+    + HIL
Sbjct: 273 VGPACLPFQHFLDSFAGSDVTVLGWGHTSFNGMLSHIL 310


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 22.6 bits (46), Expect = 7.8
 Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 8/75 (10%)

Query: 239 RTIGMTRAKTCDKPLQDFEKNSKVYPGLTTAASVGVMPRVTSSGSMNEAARRRKVSVISN 298
           RT  +T + TCD+P  + E +S       T+   G++ R      +N  AR  K +    
Sbjct: 258 RTECVTNSVTCDRPSDEAEPSS-------TSKKSGIV-RSHQQSCINRVARETKTAGTLA 309

Query: 299 ISNMDFTGSYLQLYL 313
           +    F   +L  ++
Sbjct: 310 VVVGGFVACWLPFFI 324


>AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-like
           protein protein.
          Length = 130

 Score = 22.6 bits (46), Expect = 7.8
 Identities = 9/22 (40%), Positives = 12/22 (54%)

Query: 457 FRGMCLSNFTLTISEYCPLEKL 478
           F G      +  ++E CPLEKL
Sbjct: 87  FEGEMAEKISNELNEMCPLEKL 108


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.323    0.137    0.409 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,986
Number of Sequences: 429
Number of extensions: 4970
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 7
Number of HSP's gapped (non-prelim): 5
length of query: 505
length of database: 140,377
effective HSP length: 61
effective length of query: 444
effective length of database: 114,208
effective search space: 50708352
effective search space used: 50708352
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 46 (22.6 bits)