Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001144-TA|BGIBMGA001144-PA|undefined
(755 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 34 0.063
SPCC330.01c |rhp16|SPCC613.13c, rad16|Rad16 homolog Rhp16|Schizo... 34 0.084
SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynei... 31 0.45
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 31 0.45
SPBC1773.04 |||flavonol reductase/cinnamoyl-CoA reductase family... 31 0.59
SPCC1281.08 |wtf11|meu24|wtf element Wtf11|Schizosaccharomyces p... 31 0.59
SPAC1F3.04c |||DUF367 family protein|Schizosaccharomyces pombe|c... 31 0.78
SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho... 30 1.0
SPBC1685.14c |||Vid27 family protein|Schizosaccharomyces pombe|c... 30 1.0
SPBC83.07 |jmj3||Lid2 complex subunit Jmj3|Schizosaccharomyces p... 30 1.4
SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145 |Schizo... 30 1.4
SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces pom... 29 1.8
SPAC14C4.07 |||membrane transporter|Schizosaccharomyces pombe|ch... 29 1.8
SPBC1861.03 |mak10||NatC N-acetyltransferase complex subunit Mak... 29 1.8
SPBC3B9.03 |||signal recognition particle receptor alpha subunit... 29 2.4
SPBC16D10.04c |dna2||DNA replication endonuclease-helicase Dna2|... 29 3.1
SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large subunit|... 29 3.1
SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces ... 29 3.1
SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomy... 28 4.2
SPAC19D5.02c |||peroxisomal membrane protein Pex22 |Schizosaccha... 28 4.2
SPAC6G9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 28 4.2
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 28 5.5
SPAC1782.03 |||microfibrillar-associated protein family protein|... 28 5.5
SPAC167.05 ||SPAC57A7.01|Usp |Schizosaccharomyces pombe|chr 1|||... 28 5.5
SPAP8A3.05 |||ski complex subunit Ski7 |Schizosaccharomyces pomb... 28 5.5
SPAC631.02 |||bromodomain protein|Schizosaccharomyces pombe|chr ... 28 5.5
SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase ki... 28 5.5
SPAC23D3.06c |nup146||nucleoporin Nup146|Schizosaccharomyces pom... 28 5.5
SPCC970.08 |||inositol polyphosphate kinase |Schizosaccharomyces... 27 7.3
SPCC4G3.04c |coq5||C-methytransferase |Schizosaccharomyces pombe... 27 7.3
SPBC106.13 |||conserved eukaryotic protein|Schizosaccharomyces p... 27 9.6
SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyc... 27 9.6
SPCC794.04c |||membrane transporter|Schizosaccharomyces pombe|ch... 27 9.6
SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 compon... 27 9.6
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 34.3 bits (75), Expect = 0.063
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 10/96 (10%)
Query: 183 NQMQQTLNNYNVAQSIPLVEYTHSVDYPATFVESPVIDIDAVQNTNQSKSYRNIPSSYVI 242
N+++ ++ N+A+ +E + D PA ++ ++A +NT+ +KS +P++ V
Sbjct: 1638 NKLKLSMLEKNLARVRAELEQSKKKDSPA------ILSLEASKNTDSNKSNSEVPAAQV- 1690
Query: 243 DEIKDISPQASEDHISATKTSDASFESTGVDVGNDI 278
E K I+ S D S K S + G+DV ND+
Sbjct: 1691 KEKKLIAKTHSVDTNSPPKRSSS---DAGMDVSNDV 1723
>SPCC330.01c |rhp16|SPCC613.13c, rad16|Rad16 homolog
Rhp16|Schizosaccharomyces pombe|chr 3|||Manual
Length = 963
Score = 33.9 bits (74), Expect = 0.084
Identities = 47/224 (20%), Positives = 80/224 (35%), Gaps = 17/224 (7%)
Query: 226 NTNQSKSYRNIPSSYVIDEIKDISPQASEDHISATKTSDASFES-TGVDVGNDINYDTGI 284
N+N +K N+ +V+D+ D AS + D G + ++ + +
Sbjct: 111 NSNSNKGKENM--HFVLDDNGDSKGNASNQQVERDDKLDMETTRWNGKEFEEPLSTNKKL 168
Query: 285 PLEMNKNSFHNSDNKPSFADLRGVKDEDVDKYRTENNLQNIDSPLLYLKPSAPHKNHGDF 344
++ N S +S S +D D N + L+ S K
Sbjct: 169 IIQSNNTSSQHSTPPLSISDTSTHTGSSTDNVEANPNTGFSSARKRSLRSSNLKKK---- 224
Query: 345 ILSLSTPRAENEYEIYDDAPSTTIAPKPPTLTSWDESRTDYSHSLSPPAEEPVKSNKPKF 404
+ LS+P NE E DD S +A ++ E T + + P P S +
Sbjct: 225 FVPLSSPEESNESEFIDDDESDEVA----SIIDIKEDET-FDSKVEIPEAAPSSSTESDE 279
Query: 405 VQIIVPYTTLRKEVDNDYSQGTKEWSIISEKEFQPRNIPPHKES 448
I + Y + R+ V S S S Q ++IP H+ +
Sbjct: 280 ESIPLSYQSKRRRVSARASS-----SASSSSRTQAKSIPSHERT 318
>SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynein
Mcp5/Num1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 968
Score = 31.5 bits (68), Expect = 0.45
Identities = 23/91 (25%), Positives = 39/91 (42%), Gaps = 4/91 (4%)
Query: 167 PFSPITAFPNNVVQGINQMQQTLNNYNVAQSIPLVEYTHSVDYPATFVESPVIDIDAVQN 226
P P + +NV ++Q L + N+A+ LV H V T SP + + ++N
Sbjct: 287 PIDPFLSLESNVQTSVSQSSAVLKSINLAKQ-ELVSVNHLV-ADDTKTPSPNLSSEIIEN 344
Query: 227 TNQ--SKSYRNIPSSYVIDEIKDISPQASED 255
T KS R++ + + DI + D
Sbjct: 345 TKADIKKSIRSLNKAVSPENSIDIEDETDRD 375
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 31.5 bits (68), Expect = 0.45
Identities = 60/287 (20%), Positives = 120/287 (41%), Gaps = 20/287 (6%)
Query: 1 MSSTYAPST-LYGTPAPMYSTTSYSYGIPYPGTTPEAWTPAVQPNDVNNNSPQSDVEILR 59
+SST + S+ + +P+ ST+S + T A TPA ++ P +
Sbjct: 307 ISSTISSSSFIVESPSVALSTSSTT-------TITNASTPAANTIISRSSKPTDTTNSIS 359
Query: 60 DLNPSHELQLPKVTHPTEFRNSYGETITNINVLDISYPASATAAESTKVRTEVLPHGVTN 119
N + E ++T PT +S IT+ +VL+ S P ++++ +T T + V N
Sbjct: 360 FANTTPENTSTQITSPTAVNSS--TPITSSSVLNSSTPITSSSILNTS--TPITSSSVLN 415
Query: 120 MTYPKHSLALANPA-PFTLNRGRNIHTLQPVALPNLSVSPLPPIFNARPFSPITAFPNNV 178
+ P S ++ N + P T + N T P+ + +++ PI ++ + T ++
Sbjct: 416 SSTPITSSSILNSSTPITSSTVLNSST--PIT-SSTALNTSTPITSSSVLNSSTPITSSS 472
Query: 179 VQGINQMQQTLNNYNVAQSIPLVEYTHSVDYPATFVESPVIDIDA-VQNTNQSKSYRNIP 237
V +N ++ V S P+ T V+ S ++ + +++ S I
Sbjct: 473 V--LNSSTPITSSTVVNTSTPITSST-VVNSSTPITSSTALNTSTPITSSSVLNSSTPIT 529
Query: 238 SSYVIDEIKDISPQASEDHISATKTSDASFESTGVDVGNDINYDTGI 284
SS ++ I+ + + + +S ST + + +N T I
Sbjct: 530 SSTALNTSTSITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPI 576
>SPBC1773.04 |||flavonol reductase/cinnamoyl-CoA reductase
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 336
Score = 31.1 bits (67), Expect = 0.59
Identities = 9/26 (34%), Positives = 19/26 (73%)
Query: 562 ESASSIQHIVHSTDKINSTLTPPRKE 587
E+A + +++H+ +++S L PPRK+
Sbjct: 69 EAAKGVDYVIHAATEVHSNLEPPRKD 94
>SPCC1281.08 |wtf11|meu24|wtf element Wtf11|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 264
Score = 31.1 bits (67), Expect = 0.59
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 258 SATKTSDASFESTGVDVGNDINYDTGIPLEMNKNS 292
S+ + GVD+GNDI+ + G+PL+ N +
Sbjct: 10 SSVDVEEKMESENGVDLGNDIDLEKGLPLKYNSEN 44
>SPAC1F3.04c |||DUF367 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 288
Score = 30.7 bits (66), Expect = 0.78
Identities = 33/105 (31%), Positives = 46/105 (43%), Gaps = 11/105 (10%)
Query: 486 NNFYEVRETPFDIIKLQHTIDDWTEQEYSKEYKNQEKTRSSEKLAKQIPDDFFT----TT 541
++F+EV E DI H D E+E K+Y +E S ++ Q DD ++
Sbjct: 161 HSFFEVNEELLDIYAQCHDAQDIQEKE--KKYL-EEMEASYQEQRNQTTDDIWSAGNLNH 217
Query: 542 VPTNYDSET--NSYHNYDFYDHESASSIQHIVHS--TDKINSTLT 582
PT S T NS + S +S+ H HS TD TLT
Sbjct: 218 KPTLNTSSTHSNSEESRSPLHEPSEASLAHDEHSIPTDDNEETLT 262
>SPBC3E7.01 |fab1|ste12,
SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase
Fab1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1932
Score = 30.3 bits (65), Expect = 1.0
Identities = 27/108 (25%), Positives = 44/108 (40%), Gaps = 6/108 (5%)
Query: 201 VEYTHSVDYPATFVESPVIDIDAVQNTNQSKSYRNIPSSYVIDEIKDISPQASEDHISAT 260
+E T YP+ ES ++ V TN + + R P + D + ++ S D S
Sbjct: 1246 LENTQIDIYPSFKTESTDDQLEKVTQTNVASNKRVAPYA---DSMANVGSPES-DCFSVA 1301
Query: 261 KTSDASFESTGVDVGNDINYDTGIPLEMNKNSFHNSDNKPSFADLRGV 308
+SD +D NDI+ P NS + P+ + +GV
Sbjct: 1302 TSSD--IPKANIDFTNDISTQNTFPASPVSNSGFSRQTYPNISQRQGV 1347
>SPBC1685.14c |||Vid27 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 801
Score = 30.3 bits (65), Expect = 1.0
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Query: 322 LQNIDSPLLYLKPSAPHKNHGDFILSLSTPRAENEYEIYDDAPSTTIAP 370
L N DS +L+ +APH + + + + +E++++DD P T P
Sbjct: 491 LHNQDSSILFQTENAPHSLYH---MDIEYGKIVDEWKVHDDVPLVTFTP 536
>SPBC83.07 |jmj3||Lid2 complex subunit Jmj3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 752
Score = 29.9 bits (64), Expect = 1.4
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 202 EYTHSVDYPATFVESPVIDIDAVQNTNQSKSYRNIP--SSYVIDEIKDISPQASEDHISA 259
E T SVD T VE ++++++ NTN+S + P S ++++ S E+ +
Sbjct: 619 EPTSSVDVAPTPVEDVNVNLESISNTNESVVDLSDPLVSKNGFEDVERSSVADLEEDVLE 678
Query: 260 TKTSDASFESTGVD 273
T++S FE++ +D
Sbjct: 679 TRSS--IFETSDID 690
Score = 27.9 bits (59), Expect = 5.5
Identities = 20/106 (18%), Positives = 43/106 (40%), Gaps = 5/106 (4%)
Query: 509 TEQEYSKEYKNQEKTRSSEKLAKQIPDDFFTTTVPTNYDSETNSYHNYDFYDHESASSIQ 568
+E YS + + +++ D+F+ +P + ++ ++H H S +
Sbjct: 336 SESLYSSKSLWPHSHKPQRACSQKFLDEFYLHDLPESNIHDSGNFHPI----HSSVDNNS 391
Query: 569 HIVHSTDKINSTLTPPRKEYNMIERTKTKHIDNKNGSLSEINKFHV 614
D NS + PP + E T+H ++ + E++ HV
Sbjct: 392 FSQRDFDSPNS-INPPSPLMSNHESASTEHFNSTTTTEKELSSLHV 436
>SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 520 QEKTRSSEKLAKQIPDDFFTTTVPTNYDSETNSYHNYDFYDHESASSIQHIVHST 574
+EKT S KLA++ DD T N + + N +FYD S+ +V++T
Sbjct: 58 REKTNSGAKLAEKNSDDKDQLT-ENNDNLYNDKKSNGNFYDTNKTDSVDGMVYTT 111
>SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 963
Score = 29.5 bits (63), Expect = 1.8
Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
Query: 494 TPFDIIKLQHTIDDWTEQEYSKEYKNQEKTRSSEKLAKQIPDDFFTTTVPTNYDSETNSY 553
+PFD QH ID TE Y+ Q + S P ++ +Y +E N Y
Sbjct: 638 SPFD--NFQH-IDHSTELGYASNTSQQYQQTSHPAYTTMSPIEYGQAAPAAHYYNERNQY 694
Query: 554 HNYD 557
YD
Sbjct: 695 SQYD 698
>SPAC14C4.07 |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 644
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 513 YSKEYKNQEKTRSSEKLAKQIPDDFFTTTVPTNYDSETNSYHNYDFYDHESASS 566
+S +++ + S+ +AK D F P NYDS +NS F + +S++S
Sbjct: 51 HSLKHETNGASSSNNNVAKSSSHDSFKAK-PKNYDSTSNSNEPISFNEPDSSNS 103
>SPBC1861.03 |mak10||NatC N-acetyltransferase complex subunit Mak10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 708
Score = 29.5 bits (63), Expect = 1.8
Identities = 27/120 (22%), Positives = 59/120 (49%), Gaps = 10/120 (8%)
Query: 183 NQMQQTLNNYNVAQSIPL----VEYTHSVDYPATFVESPVIDIDAVQNTNQSKSYRNIPS 238
+ M LN++ +A S+ + +++T P +V S + A+ N + + R+ P+
Sbjct: 325 DDMLLILNSHTLASSLAVYQFCLDFTRLNRTPEPYVRS---SLQALITANNAVNLRDQPT 381
Query: 239 SYVIDEIKDISPQASEDHISATKT---SDASFESTGVDVGNDINYDTGIPLEMNKNSFHN 295
SY+++ I++ S S + T+T ++ + G V + I + T I +++ + HN
Sbjct: 382 SYMLECIREFSGLPSNFYNPNTRTVIEKNSISSAYGPLVESLIAHSTNIMVDLVRICSHN 441
>SPBC3B9.03 |||signal recognition particle receptor alpha subunit
Srp101|Schizosaccharomyces pombe|chr 2|||Manual
Length = 547
Score = 29.1 bits (62), Expect = 2.4
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 182 INQMQQTLNNYNVAQSIPLVEYTHSVDYPATFVESPVIDIDAVQNTNQSKSYRN 235
+ QMQ+ L NVA SI L E SV A+ + V D V+NT +K++R+
Sbjct: 265 LKQMQEHLTKKNVANSIAL-ELCESV--KASLINKKVGSFDTVKNT-VNKAFRD 314
>SPBC16D10.04c |dna2||DNA replication endonuclease-helicase
Dna2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1398
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 8/55 (14%)
Query: 231 KSYRNIPSSYVIDEIKDISPQASEDHI--------SATKTSDASFESTGVDVGND 277
+ Y +P+S V KDI A +H+ SATK SDA+ V++ D
Sbjct: 271 RQYSQLPNSTVTASAKDIEKTAKVNHVGGDLQSYCSATKASDATINEEPVNLALD 325
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 305 LRGVKDEDVDKYRTENNLQNIDSPLLYLK 333
+R VKDED++ Y+ L N + LL LK
Sbjct: 714 MREVKDEDLEFYKKWEKLLNQEERLLLLK 742
>SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1752
Score = 28.7 bits (61), Expect = 3.1
Identities = 41/172 (23%), Positives = 69/172 (40%), Gaps = 13/172 (7%)
Query: 2 SSTYAPSTLYGTPAPMYSTTSYSYGIPYPGTTPEAWTPAVQPNDVNNNSPQSDVEILRDL 61
S Y+ S Y +P YS TS SY P +P +P+ P + ++
Sbjct: 1562 SPGYSTSPAYMPSSPSYSPTSPSYSPTSPSYSPT--SPSYSPTSPSYSATSPSYS---PT 1616
Query: 62 NPSHELQLPKVTHPTEFRNSYGETITNINVLDISY-PASATAAESTKVRTEVLP-HGVTN 119
+PS+ P + PT SY T + + SY P S + + ++ + P + T+
Sbjct: 1617 SPSYSPTSPSYS-PTS--PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1673
Query: 120 MTYPKHSLALANPAPFTLNRGRNIHTLQPVALP-NLSVSPLPPIFNARPFSP 170
+Y S + + +P + P P + S SP P ++ P SP
Sbjct: 1674 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS--PTSP 1723
>SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1364
Score = 28.7 bits (61), Expect = 3.1
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 538 FTTTVPTNYDSETNSYHNYDF-YDHESASSIQHIVHS-TDKINSTLTPPRK-----EYNM 590
F TT TN++ N +N F D S+S +H+V + TDK+ + R + +
Sbjct: 587 FNTTSFTNHERSPNGNNNLKFSKDPNSSSPSRHVVATPTDKLGTRKRRLRYSTSSFDQST 646
Query: 591 IERTKTKHIDNKNGSLSEIN 610
+ R + I N S+S +N
Sbjct: 647 LRRNRLATIRNARKSISTLN 666
>SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 603
Score = 28.3 bits (60), Expect = 4.2
Identities = 15/80 (18%), Positives = 33/80 (41%)
Query: 41 VQPNDVNNNSPQSDVEILRDLNPSHELQLPKVTHPTEFRNSYGETITNINVLDISYPASA 100
V N+ + ++ L + PSH +P P +N T + ++ + +P+
Sbjct: 293 VHQNETHGSTISVPNPNLSQMGPSHSSSVPSNLSPNPAQNENPSTTSIPSINNQPFPSGL 352
Query: 101 TAAESTKVRTEVLPHGVTNM 120
+A+ S + +P V +
Sbjct: 353 SASNSNFASSSFIPQSVPQL 372
>SPAC19D5.02c |||peroxisomal membrane protein Pex22
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 223
Score = 28.3 bits (60), Expect = 4.2
Identities = 20/85 (23%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
Query: 528 KLAKQIPDDFFTTTVPTNYDSE----TNSYHNYDFYDHESASSIQHIVHSTDKINSTLTP 583
K ++P D + ++ +E T H++DF +S S++ +H + I T
Sbjct: 90 KTLPKVPRDHYIILCDSSESNEIAKFTQVVHSFDF-SSDSESAVVEQLHPSSPIPILTTA 148
Query: 584 PRKEYNMIERTKTKHIDNKNGSLSE 608
RK+ + + + + NK GS +E
Sbjct: 149 VRKKGSRPSKPQKEKQGNKQGSKTE 173
>SPAC6G9.16c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 132
Score = 28.3 bits (60), Expect = 4.2
Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
Query: 202 EYTHSVDYPATFVESPV-IDIDAVQNTNQSKSYRNIPSSYVIDEIKDISPQASEDHISAT 260
E H ++Y ES V D Q S + + S V DE I + +SA+
Sbjct: 47 EDNHHINYED---ESDVGTDEQKQQEGVNSSAVSDTDESAVSDEFMQIKEEFPMKALSAS 103
Query: 261 KTSDASFESTGVD 273
T+DAS ES G D
Sbjct: 104 PTADASPESAGED 116
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.9 bits (59), Expect = 5.5
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 480 SPANTFNNFYEVRE-TPFDIIKLQHTIDDWTEQEYSKEYKNQEKTRSSEKLA 530
+P+N FN F +++ P + H D+W++ +E +++ RSS+ A
Sbjct: 1620 APSNHFNPFAKMQPPAPSPLQPSGHDSDNWSQHGDEEEEDSEDDIRSSKDAA 1671
>SPAC1782.03 |||microfibrillar-associated protein family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 355
Score = 27.9 bits (59), Expect = 5.5
Identities = 23/115 (20%), Positives = 51/115 (44%), Gaps = 6/115 (5%)
Query: 167 PFSPITAFPNNVVQGINQMQQTLNNYNVAQSIPLVEYTHSVDYPATFVESPVIDIDAVQN 226
P PI+ + + ++G+ + ++Y E + S + V +PV + + +
Sbjct: 9 PHKPISRYRSGRLEGLESESSSESDYEEVSDSHDQENSIS---SSRHVITPVFEKEGISE 65
Query: 227 TNQSKSYRNIPSSYVIDEIKDISPQASEDHISATKTSDASFESTGVDVGNDINYD 281
T S +++NI ID + + + D SA S+++ S+ + +D Y+
Sbjct: 66 TKTSSNFQNINPVQTID---NSASEYETDASSAEGGSNSAASSSEEEDSSDSEYE 117
>SPAC167.05 ||SPAC57A7.01|Usp |Schizosaccharomyces pombe|chr
1|||Manual
Length = 601
Score = 27.9 bits (59), Expect = 5.5
Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 281 DTGIPLEMN-KNSFHNSDNKPSFADLRGVKDEDVDKYRTENNLQNIDSPLLYLKPSAPHK 339
D+G ++ + S +S N P F ++G + D+D + SP + S+P+
Sbjct: 60 DSGYRMDSSLMTSLPHSRNPPIFEAIQGEQPSDIDTLNLKKVKSGPTSPSSIDRLSSPNA 119
Query: 340 NHGDFILS 347
GD + S
Sbjct: 120 KAGDILAS 127
>SPAP8A3.05 |||ski complex subunit Ski7 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 695
Score = 27.9 bits (59), Expect = 5.5
Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 5/83 (6%)
Query: 500 KLQHTIDDWTEQEYSKEYKNQEKTRSSEKLAKQIPDDFF-----TTTVPTNYDSETNSYH 554
K H+ T+Q+ K K +EK K K + +DF + DSE S H
Sbjct: 81 KKLHSSFPSTQQQPPKTEKEKEKEPIQAKHKKNVENDFLLQRFRKVRIAEKKDSEQPSSH 140
Query: 555 NYDFYDHESASSIQHIVHSTDKI 577
D + +++Q + +D++
Sbjct: 141 EIHLTDDDDKTTLQKQMVESDQL 163
>SPAC631.02 |||bromodomain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 727
Score = 27.9 bits (59), Expect = 5.5
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 226 NTNQSKSYRNIPSSYVIDEIKDISPQASEDHISATKTSDAS 266
+T+ K RN S + +SP + +D S T T+DAS
Sbjct: 139 HTHPPKRVRNEDDSLTFSKTSPVSPSSLKDGASNTVTNDAS 179
>SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase
kinase Win1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1436
Score = 27.9 bits (59), Expect = 5.5
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Query: 666 NISNSWYANEKFETKKTKVDSIQNASDEIPLKSATFVNR 704
NI SW NE+ + K +SI N S + + FV R
Sbjct: 465 NIIRSWVGNEEMDITKNTTNSINNVSQ---ISNGPFVER 500
>SPAC23D3.06c |nup146||nucleoporin Nup146|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1325
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 670 SWYANEKFETKKTKVDSIQNASDEIPLKSATFV 702
SW N +F + + S+ N SDE P +S FV
Sbjct: 254 SWIENREFVVFYSPLTSLSNESDEPPHESECFV 286
>SPCC970.08 |||inositol polyphosphate kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 967
Score = 27.5 bits (58), Expect = 7.3
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 8/74 (10%)
Query: 201 VEYTHSVDYPATFVESPVIDIDA--VQNTNQSKSYRNIPSSYVIDEIKDISPQASE-DHI 257
VE H + A E+ +D + V + NQ KSYR S V +E P+++E +
Sbjct: 547 VEDKHYDLHSAVAEENEEVDEELLNVPSNNQGKSYRRFSSDAVWEE-----PESNEFPRV 601
Query: 258 SATKTSDASFESTG 271
S T S ESTG
Sbjct: 602 SGTMEDYDSRESTG 615
>SPCC4G3.04c |coq5||C-methytransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 305
Score = 27.5 bits (58), Expect = 7.3
Identities = 17/57 (29%), Positives = 26/57 (45%)
Query: 492 RETPFDIIKLQHTIDDWTEQEYSKEYKNQEKTRSSEKLAKQIPDDFFTTTVPTNYDS 548
R+ F I+ L TI Q Y ++ E+ ++ AK I D FT T Y++
Sbjct: 235 RQYSFKILPLLGTIIAGDSQSYEYLVESIERFPDAKTFAKMIEDAGFTLAGETGYET 291
>SPBC106.13 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 404
Score = 27.1 bits (57), Expect = 9.6
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 567 IQHIVHSTDKINSTLTPPRKEYNMIERTKTKHIDNKNGSLSEINK 611
++H+ H + INSTLT + N K + ID+ +S + K
Sbjct: 31 LRHLEHESHVINSTLTTLISQENASMDEKIEKIDSLLSRVSTVKK 75
>SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1190
Score = 27.1 bits (57), Expect = 9.6
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 506 DDWTEQEYSKEYKNQEKTRSSEKLAKQIPDDF 537
+DW E+E+ + K + TRS+E ++ + F
Sbjct: 58 EDWEEEEHKPKAKRRYNTRSNESFSEGDDEPF 89
>SPCC794.04c |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 547
Score = 27.1 bits (57), Expect = 9.6
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 674 NEKFETKKTKVDSIQNASDEIPLKSATFVNRPSFGFTSGGKIESGRSDTYE 724
N F ++ KV+S N+SDE L S T R S TS + +SG D+Y+
Sbjct: 39 NLPFHREREKVESNPNSSDEEDLTS-TNNTRSSDNTTSDTEDDSG-EDSYQ 87
>SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 component
of oxoglutarate dehydrogenase complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 452
Score = 27.1 bits (57), Expect = 9.6
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 8/58 (13%)
Query: 361 DDAPSTTIAPKPPTLTSWDESRTDYSHSLSPPAE-EPVKSNKPKFVQIIVPYTTLRKE 417
+ APS+T P P D ++S PA+ EPVK +KPK + P + R E
Sbjct: 170 ESAPSST-KPAP------DAKEPEFSSPKPKPAKSEPVKQSKPKATETARPSSFSRNE 220
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.310 0.128 0.370
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,869,101
Number of Sequences: 5004
Number of extensions: 187287
Number of successful extensions: 526
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 481
Number of HSP's gapped (non-prelim): 49
length of query: 755
length of database: 2,362,478
effective HSP length: 78
effective length of query: 677
effective length of database: 1,972,166
effective search space: 1335156382
effective search space used: 1335156382
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 57 (27.1 bits)
- SilkBase 1999-2023 -