Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001144-TA|BGIBMGA001144-PA|undefined
(755 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1) 37 0.052
SB_52786| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.28
SB_7402| Best HMM Match : Extensin_2 (HMM E-Value=2) 33 0.64
SB_24597| Best HMM Match : RNA_pol_delta (HMM E-Value=0.71) 33 0.84
SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0) 33 0.84
SB_26064| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.84
SB_4922| Best HMM Match : CXC (HMM E-Value=0.013) 32 1.5
SB_28627| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.9
SB_14239| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.9
SB_49163| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.6
SB_6033| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=1.6e-37) 31 2.6
SB_19342| Best HMM Match : Keratin_B2 (HMM E-Value=0.41) 31 2.6
SB_49745| Best HMM Match : A2M_comp (HMM E-Value=0) 31 3.4
SB_27928| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.4
SB_33318| Best HMM Match : EGF (HMM E-Value=7.5e-05) 31 4.5
SB_29436| Best HMM Match : PAN (HMM E-Value=0.021) 30 6.0
SB_27925| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.0
SB_21585| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.0
SB_15815| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.0
SB_8440| Best HMM Match : RVT_1 (HMM E-Value=4.3e-18) 30 6.0
SB_43996| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.0
SB_34086| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.0
SB_21088| Best HMM Match : PLAT (HMM E-Value=1.7e-18) 30 6.0
SB_16949| Best HMM Match : DUF1174 (HMM E-Value=0.08) 30 6.0
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.0
SB_53540| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 7.9
SB_52076| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 7.9
SB_51336| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 7.9
SB_8854| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 7.9
SB_867| Best HMM Match : Leo1 (HMM E-Value=0) 30 7.9
>SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1)
Length = 231
Score = 37.1 bits (82), Expect = 0.052
Identities = 31/119 (26%), Positives = 46/119 (38%), Gaps = 3/119 (2%)
Query: 4 TYAPSTLYGTPAPMY-STTSYSYGIPYPGTTPEAWTPAVQPNDVNNNSPQSDVEILRDLN 62
+Y P+T Y TP P Y STTSY+ Y TT TP+ P +P
Sbjct: 79 SYTPTTSY-TPTPSYTSTTSYTPTTSYTSTTSYTPTPSYTPTPSYTPTPSYTSTTSYTPT 137
Query: 63 PSHELQLPKVTHPTEFRNSYGETITNINVLDISYPASATAAESTKVRTEVLPHGVTNMT 121
S+ P T T + ++ T T SY ++ + +T + T+ T
Sbjct: 138 TSY-TPTPSYTSTTSYTSTTSYTSTTSYTSTPSYTSTTSYTSTTSYTSTTSYTSTTSYT 195
Score = 33.9 bits (74), Expect = 0.48
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 2 SSTYAPSTLYGTPAPMY-STTSYSYGIPYPGTTPEAWTPA 40
+++Y P+T Y TP P Y STTSY+ Y TT TP+
Sbjct: 131 TTSYTPTTSY-TPTPSYTSTTSYTSTTSYTSTTSYTSTPS 169
Score = 32.3 bits (70), Expect = 1.5
Identities = 27/106 (25%), Positives = 44/106 (41%), Gaps = 9/106 (8%)
Query: 2 SSTYAPSTLYGTPAPMYS-TTSYSYGIPYPGTTPEAWTPAVQPNDVNNNSPQSDVEILRD 60
+++Y P+T Y TP P Y+ TTSY+ Y TT ++TP + +P
Sbjct: 65 TTSYTPTTSY-TPTPSYTPTTSYTPTPSYTSTT--SYTPTTSYTSTTSYTPTPSYTPTPS 121
Query: 61 LNPSHELQLPKVTHPTEFRNSYGETITNINVLDISYPASATAAEST 106
P+ P T T + + T T SY ++ + +T
Sbjct: 122 YTPT-----PSYTSTTSYTPTTSYTPTPSYTSTTSYTSTTSYTSTT 162
Score = 31.1 bits (67), Expect = 3.4
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 2 SSTYAPSTLYGTPAPMYS-TTSYSYGIPYPGTTPEAWTPAVQPNDVNNNSP 51
+++Y P+ Y TP P Y+ TTSY+ Y TT TP+ P +P
Sbjct: 41 TTSYTPTPSY-TPTPSYTPTTSYTPTTSYTPTTSYTPTPSYTPTTSYTPTP 90
Score = 30.3 bits (65), Expect = 6.0
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 4 TYAPSTLYGTPAPMYS-TTSYSYGIPYPGTTPEAWTPAVQP 43
+Y P+T Y TP P Y+ TTSY+ Y T TP+ P
Sbjct: 19 SYTPTTSY-TPTPSYTPTTSYTCTTSYTPTPSYTPTPSYTP 58
>SB_52786| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 392
Score = 34.7 bits (76), Expect = 0.28
Identities = 26/99 (26%), Positives = 36/99 (36%), Gaps = 1/99 (1%)
Query: 44 NDVNNNSPQSDVEI-LRDLNPSHELQLPKVTHPTEFRNSYGETITNINVLDISYPASATA 102
N+ N VE+ R P + LP P F Y T L + PA T
Sbjct: 105 NNTENTRNHEGVELEKRSFLPFTQRPLPSAIIPPSFHTRYPHTSEIPTFLPLPPPAGLTM 164
Query: 103 AESTKVRTEVLPHGVTNMTYPKHSLALANPAPFTLNRGR 141
AE +VR+ +P + NP P ++ GR
Sbjct: 165 AEYLEVRSTFHTPRPMIPVFPPPQMKHINPPPVLIHYGR 203
>SB_7402| Best HMM Match : Extensin_2 (HMM E-Value=2)
Length = 267
Score = 33.5 bits (73), Expect = 0.64
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 2 SSTYAPSTLYGTPAPMY-STTSYSYGIPYPGTTPEAWTPA 40
+++Y P+T Y TP P Y STTSY+ Y TT TP+
Sbjct: 152 TTSYTPTTSY-TPTPSYTSTTSYTSTTSYTSTTSYTPTPS 190
>SB_24597| Best HMM Match : RNA_pol_delta (HMM E-Value=0.71)
Length = 1139
Score = 33.1 bits (72), Expect = 0.84
Identities = 16/44 (36%), Positives = 22/44 (50%)
Query: 560 DHESASSIQHIVHSTDKINSTLTPPRKEYNMIERTKTKHIDNKN 603
DH S SS+ H+ + D NS T K N IER +++ N
Sbjct: 631 DHPSTSSVPHVGSNDDPDNSYSTSQTKRSNKIERVRSQDSPENN 674
>SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0)
Length = 1467
Score = 33.1 bits (72), Expect = 0.84
Identities = 46/173 (26%), Positives = 71/173 (41%), Gaps = 13/173 (7%)
Query: 3 STYAPSTLYGTPAPMYSTTSYSYGIPYPGTTPEAWTPAVQPNDVNNNSPQSDVEILRDLN 62
S +PS+ Y +P YS TS SY P +P +P+ P + SP S +
Sbjct: 441 SPSSPSSGYSPASPSYSPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTS--PSYSPTS 495
Query: 63 PSHELQLPKVTHPTEFRNSYGETITNINVLDISY-PASATAAESTKVRTEVLP-HGVTNM 120
PS+ P + PT SY T + + SY P S + + ++ + P + T+
Sbjct: 496 PSYSPTSPSYS-PTS--PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 552
Query: 121 TYPKHSLALANPAPFTLNRGRNIHTLQPVALPNL-SVSPLPPIF--NARPFSP 170
+Y S + + +P + P P+ S SP P F N RP P
Sbjct: 553 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSFHHNLRPTPP 605
>SB_26064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 496
Score = 33.1 bits (72), Expect = 0.84
Identities = 26/114 (22%), Positives = 46/114 (40%), Gaps = 2/114 (1%)
Query: 324 NIDSPLLYLKPSAPHKNHGDFILSLSTPRAENEYEIYDDAPSTTIAPKPPTLTSWDESRT 383
N ++ L P+ I++ ++P+ E EY + D P TTIAP + E
Sbjct: 197 NKTEAVMILGPTTQELYVMGLIVNSTSPKVEYEYWLPKDRPPTTIAPITEPVEPVTEDLK 256
Query: 384 DYSHSLSPPAEE--PVKSNKPKFVQIIVPYTTLRKEVDNDYSQGTKEWSIISEK 435
+ + P E+ PV + + P T + V D T+ ++E+
Sbjct: 257 PVTEPVEPVTEDLKPVTEPDEPVTEDVKPVTEPIEPVTEDLKPVTEPVEPVTEE 310
>SB_4922| Best HMM Match : CXC (HMM E-Value=0.013)
Length = 600
Score = 32.3 bits (70), Expect = 1.5
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 41 VQPNDVNNNSPQSDVEILRDLNPSHELQLPKVTHPTEFRNSYGETITNINVLDISYPASA 100
V N N + PQ++ ++ +P H L LPKVT P + +TN V S A +
Sbjct: 177 VPDNRANTSVPQANPSLVLT-HPLHSL-LPKVTFPVAISTQALQLMTNTAVTHTSVEALS 234
Query: 101 TA-AEST 106
TA EST
Sbjct: 235 TAIVEST 241
>SB_28627| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 745
Score = 31.9 bits (69), Expect = 1.9
Identities = 45/171 (26%), Positives = 68/171 (39%), Gaps = 16/171 (9%)
Query: 67 LQLPKVTHPTEFRNSYGETITNINVLDISYPASA--TAAESTK-VRTEVLPHGVTNMTYP 123
LQ + T R + T + + + S+ S + A++TK V T+ + ++ +P
Sbjct: 156 LQTSVIYQATVTRKDNNTSETYVGLTENSFKTSRFLSEAQTTKPVSTDPIQSCLSPFNFP 215
Query: 124 --KHSLALANPA-PFTLNRGRNIHTLQ-PVALPNLSVSPL-PPI-----FNARPFSPITA 173
+ SL P P T N T Q P P +S S PP N + F+P ++
Sbjct: 216 NTQSSLVYTKPQRPLTANTFVTFQTTQVPDNRPIISQSQTNPPSTLTAWHNTQEFTPKSS 275
Query: 174 FPNNVVQGINQMQQTLNNYNVAQSIPLVEYTHSVDYPATFVESPVIDIDAV 224
V QGI Q N NV S P Y + T P + D+V
Sbjct: 276 ---TVYQGIQNAQPMSQNQNVQSSDPSRHYNGIPNQNVTQSYQPPLQTDSV 323
>SB_14239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 31.9 bits (69), Expect = 1.9
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 369 APKPPTLTSWDESRTDYSHSLSPPAEEPVKSNKPKFVQIIVPYTTLRKEVDNDYSQGTKE 428
A K PT TS D+SR + + PP EEP KP ++ Y L K ++ +E
Sbjct: 639 ATKLPTTTSGDKSRQENASHAGPPTEEP-SPLKPFAGKLQDIYENLNKLIETSVHWKNRE 697
Query: 429 WSI 431
++
Sbjct: 698 HAL 700
>SB_49163| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 207
Score = 31.5 bits (68), Expect = 2.6
Identities = 22/77 (28%), Positives = 31/77 (40%), Gaps = 3/77 (3%)
Query: 320 NNLQNIDSPLLYLKPSAPHKNHGDFILSLSTPRAENEYEIYDDAPSTTIAPKPPTLTSWD 379
N L+ D+P Y P +NH L TP AE E D P + P + +
Sbjct: 69 NTLEEPDNPNQYYAPKGSTENHVYKSLEPDTPHAEMVNE--PDTPHAEMV-NEPVYNTLE 125
Query: 380 ESRTDYSHSLSPPAEEP 396
ES DY + ++P
Sbjct: 126 ESDRDYDNVSDEEDQDP 142
>SB_6033| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=1.6e-37)
Length = 1052
Score = 31.5 bits (68), Expect = 2.6
Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 7/117 (5%)
Query: 2 SSTYAP-STLYGTPAPMYSTTSYSYGIPYPGTTPEA--WTPAVQPNDVNNNSPQSDVEIL 58
S +Y+P S Y +P Y++ S SY P +P + ++PA+ N + S
Sbjct: 686 SPSYSPTSPSYSPASPSYTSASPSYSPASPSYSPTSPSYSPAIPSNSPASPSYSPASPSY 745
Query: 59 RDLNPSHELQLPKVTHPTEFRNSYGETITNINVLDISY-PASATAAESTKVRTEVLP 114
+PS+ P T + SY TI + + SY P S + + ++ T P
Sbjct: 746 TPASPSYTPASPSYTPASP---SYTPTIPSYSPTSPSYSPTSPSYSPASPSYTSASP 799
Score = 29.9 bits (64), Expect = 7.9
Identities = 33/137 (24%), Positives = 57/137 (41%), Gaps = 6/137 (4%)
Query: 2 SSTYAPSTLYGTPA-PMYSTTSYSYGIPYPGTTPEAWTPAVQPNDVNNNSPQ-SDVEILR 59
S +Y+P++ TPA P Y+ TS SY P +P +P+ P + S S
Sbjct: 658 SPSYSPASPSYTPASPSYTPTSPSYSPASPSYSPT--SPSYSPASPSYTSASPSYSPASP 715
Query: 60 DLNPSHELQLPKVTHPTEFRNSYGETITNINVLDISY-PASATAAESTKVRTEVLP-HGV 117
+P+ P + + SY + SY PAS + ++ T +P +
Sbjct: 716 SYSPTSPSYSPAIPSNSPASPSYSPASPSYTPASPSYTPASPSYTPASPSYTPTIPSYSP 775
Query: 118 TNMTYPKHSLALANPAP 134
T+ +Y S + + +P
Sbjct: 776 TSPSYSPTSPSYSPASP 792
>SB_19342| Best HMM Match : Keratin_B2 (HMM E-Value=0.41)
Length = 1093
Score = 31.5 bits (68), Expect = 2.6
Identities = 43/218 (19%), Positives = 77/218 (35%), Gaps = 9/218 (4%)
Query: 85 TITNINVLDISYPASATAAESTKVRTEVLPHGVTNMTYPKHSLALANPAPFTLNRGRNIH 144
T+T S PA T T P +++T PK + + PA + R
Sbjct: 227 TVTRCTDTKCSKPALVTPNIPRSSDTPSSPPATSSITIPKATDTQSRPATLRASISRTKD 286
Query: 145 TLQPVALPNLSVSPLPPIFNARPFSPITAFPNNVVQGINQMQQTLNNYNVAQSIPLVEYT 204
T P ++ P ++P P P + ++++ + +A+S + +
Sbjct: 287 THTPKTSTPTAIIPKSTDRQSQPTPPPATIPRSTDTQVSELSS--STATIARSSDTMA-S 343
Query: 205 HSVDYPATFVESPVIDIDAVQNTNQSKSYRNIPSSYVIDEIKDISPQASEDHISATKTSD 264
+ AT E + Q + Q IP S + S A+ + T+ S+
Sbjct: 344 RTASSTATLPE-----VTDTQASKQVTPTEKIPRSADKQASRTSSSTATIQGATGTQASN 398
Query: 265 ASFESTGVDVGNDI-NYDTGIPLEMNKNSFHNSDNKPS 301
A+ + DI N ++ P E S KP+
Sbjct: 399 ATTPTATFSRSEDIENVESSTPSEAASISVDTQTTKPA 436
>SB_49745| Best HMM Match : A2M_comp (HMM E-Value=0)
Length = 1079
Score = 31.1 bits (67), Expect = 3.4
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 356 EYEIYDDAPSTTIAPKPPTLTSWDESRTDYSHSLSPPAEEP--VKSNKPKFVQIIVPYTT 413
E +I D S A P T+T+W S+S +P +K+ K FV + +PY+
Sbjct: 267 EEQIGADRQSRVFATIPDTITTWVVQAVAVSNSTGLGIAKPLHLKAFKSLFVHLTLPYSV 326
Query: 414 LRKE 417
R E
Sbjct: 327 QRGE 330
>SB_27928| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 31.1 bits (67), Expect = 3.4
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 2 SSTYAPSTLYGTPAPMYS-TTSYSYGIPYPGTTPEAWTPAVQP 43
+++Y +T Y TP P Y+ TTSY+ Y TT TP+ P
Sbjct: 23 TTSYTSTTSY-TPTPSYTPTTSYTSTTSYTSTTSYTPTPSYTP 64
Score = 30.7 bits (66), Expect = 4.5
Identities = 25/117 (21%), Positives = 42/117 (35%), Gaps = 1/117 (0%)
Query: 5 YAPSTLYGTPAPMYSTTSYSYGIPYPGTTPEAWTPAVQPNDVNNNSPQSDVEILRDLNPS 64
Y P+T Y + +TTSY+ Y TT TP+ P ++ PS
Sbjct: 2 YTPTTSYTSTTSYTTTTSYTSTTSYTSTTSYTPTPSYTPTTSYTSTTSYTSTTSYTPTPS 61
Query: 65 HELQLPKVTHPTEFRNSYGETITNINVLDISYPASATAAESTKVRTEVLPHGVTNMT 121
+ T T + ++ T T SY ++ + +T + T+ T
Sbjct: 62 Y-TPTTSYTTTTSYTSTTSYTTTTSYTPTTSYTSTTSYTSTTSYTSTTSYTSTTSYT 117
>SB_33318| Best HMM Match : EGF (HMM E-Value=7.5e-05)
Length = 220
Score = 30.7 bits (66), Expect = 4.5
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Query: 533 IPDDFFTTTVPTNYDSETNSYHNYDFYDHESASSIQHI----VHSTDKINSTLTPPRKEY 588
IP + T T P Y + Y + ES +I I ++ ++K+ ST TPP Y
Sbjct: 80 IPSETLTCTCPRKYGQHLHHLQPYIVHVRESMVNIYTIRNLVLYMSEKVWSTSTPPATLY 139
Query: 589 NMIERTKTKHI 599
R +H+
Sbjct: 140 CTCPRKYGQHL 150
>SB_29436| Best HMM Match : PAN (HMM E-Value=0.021)
Length = 419
Score = 30.3 bits (65), Expect = 6.0
Identities = 32/150 (21%), Positives = 49/150 (32%), Gaps = 1/150 (0%)
Query: 2 SSTYAPSTLYGTPAPMYSTTSYSYGIPYPGTTPEAWTPAVQPNDVNNNSPQSDVEILRDL 61
S+T P T T P + + + TTPE + + VNNN + V
Sbjct: 141 STTETPETQSTTDTPETQSPTQTPETQSTTTTPETQSTTDTRDPVNNNDTRDPVNNNDTR 200
Query: 62 NPSHELQLPKVTHPTEFRNSYGETITNINVLDISYPASATAAESTKVRTEVLPHGVTNMT 121
+P + + T+ R+ T T V + +T T P +
Sbjct: 201 DPVNNRDTRDPVNNTDTRDPVNNTDTRDPVNNTDTETQSTTTTPETQSTTTTPETQSTTE 260
Query: 122 YPKHSLALANPAPFTLNR-GRNIHTLQPVA 150
P+ P P R R + L P A
Sbjct: 261 IPETQSTTTTPRPSQQQRHPRPRYVLPPPA 290
>SB_27925| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 430
Score = 30.3 bits (65), Expect = 6.0
Identities = 17/79 (21%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Query: 74 HPTEFRNSYGETITNINVLDISYPASATAAESTKVRTEVLPHGVTNMTYPKHSLALANPA 133
+ +E + Y + V+ S+ S+T + S ++++ + H +++P+ +A+P
Sbjct: 121 YSSEEGDEYMSVEAEVRVITESHTVSSTKSPSGQIQSRIA-HPADLISHPEGQSQVAHPR 179
Query: 134 PFTLNRGRNIHTLQPVALP 152
R H +QP LP
Sbjct: 180 NVPFRPVRQGHVVQPADLP 198
>SB_21585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 479
Score = 30.3 bits (65), Expect = 6.0
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 344 FILSLSTPRAENEYEIYDDAPSTTIAPKPP---TLTSWDESRTDYS 386
++ +++TPR E+ YE A S ++ KPP L S ES D+S
Sbjct: 90 YLANMNTPRPESYYEDVHTAQSLPVSRKPPLFQDLASAAESGWDFS 135
>SB_15815| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 807
Score = 30.3 bits (65), Expect = 6.0
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 253 SEDHISATKTSDASFESTGVDVGND--INYDTGIPLEMNKNSFHNSDNKPSFADLRGVKD 310
S H S + + + E T + N + D G P N+++ HNSD+ + ++ R +K+
Sbjct: 701 SNSHNSDSCLHNCTIEDTTLHTNNSSLVLEDQGQPSRRNRSNSHNSDSSDNASEQRTIKE 760
>SB_8440| Best HMM Match : RVT_1 (HMM E-Value=4.3e-18)
Length = 878
Score = 30.3 bits (65), Expect = 6.0
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 399 SNKPKFVQIIVPYTTLRKEVDNDYSQGTKEWSIIS 433
S+K K II PY T+R E++N G++ SI++
Sbjct: 494 SHKRKVKPIIAPYWTIRDELNNPADLGSRGGSIVN 528
>SB_43996| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1056
Score = 30.3 bits (65), Expect = 6.0
Identities = 44/162 (27%), Positives = 67/162 (41%), Gaps = 19/162 (11%)
Query: 7 PSTLYGTPAPMYSTTSYSYGIPYPGTTPEAWTPAVQPNDVNNNSPQSDVE--ILRDLNPS 64
PS + P+P +S S + +P P + + Q DV + S QS +L+ +
Sbjct: 807 PSPEHSQPSPEHSLPSQEHSLPSPTS-----SLGEQVCDVQSTSAQSYTSDLVLQTPGGA 861
Query: 65 HELQLPKVTHPTEFRNSYGETITNINVLDISYPASATAAESTKVRTEVLPHGVTNMTYPK 124
E L + P E T ++ + + P S T T + P + P
Sbjct: 862 VEHSLASASKPVE--QHLVLTTPKLDTKEHNLP-SLTFKFGTSEHNQ--PQTLFKFRAPV 916
Query: 125 HSLALANPAPFTLNRGRNIHTLQPVALPN-LSVSP-LPPIFN 164
H+ +P+ T N G +TL P LP+ LS SP PP FN
Sbjct: 917 HN----SPSSIT-NPGTQKNTLTPTNLPSVLSSSPENPPTFN 953
>SB_34086| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 890
Score = 30.3 bits (65), Expect = 6.0
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Query: 252 ASEDHISATKTSDASFESTGVDVGNDINYDTGIPLEMNKNSFHNSDNKPSFADLRGVKDE 311
A +H++AT +D FE G + + P EM+++S + D K D+RG
Sbjct: 529 AESNHVTATTLNDVQFED-GRGIFYISEHSDQTPGEMHESS--SEDTKSEMQDVRGHSTS 585
Query: 312 DVD 314
D D
Sbjct: 586 DED 588
>SB_21088| Best HMM Match : PLAT (HMM E-Value=1.7e-18)
Length = 240
Score = 30.3 bits (65), Expect = 6.0
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 639 GKIQTSISPLTKEKVYVVTSRPWRDIGNISNSWYAN 674
G + T + PL K ++ R W D+ +SWY N
Sbjct: 62 GAVNTFVVPLNKSLGPLLYIRIWHDMSGYDSSWYLN 97
>SB_16949| Best HMM Match : DUF1174 (HMM E-Value=0.08)
Length = 349
Score = 30.3 bits (65), Expect = 6.0
Identities = 46/171 (26%), Positives = 72/171 (42%), Gaps = 20/171 (11%)
Query: 19 STTSYSYGIPYPGTTPEAWTPAVQPNDVNNNS-----PQSD-VEILRDLNPSHELQLP-K 71
STTS S I +PG P + N S P +D + +PS++
Sbjct: 121 STTSIS--ITHPGNDRTTSISITHPGNDNTCSISITHPGNDRTTSISITHPSNDRTTSIS 178
Query: 72 VTHPTEFRNSYGETI--TNINVLDISYPASATAAESTKVRTEVLPHGVT---NMTYPKH- 125
+THP+ R + I +N + IS S +T + T + T ++T+P +
Sbjct: 179 ITHPSNDRTNSTNIIHPSNDSTTSISITHSGND-RTTSISTSHPGNDRTTSISITHPSND 237
Query: 126 -SLALANPAPFTLNRGRNIHTLQPVALPNLSVSPLPPIFNARPF--SPITA 173
+ ++A+P P T R + + P LS SP+P RP SPI A
Sbjct: 238 RTTSIASPIPATTGRPLSASPIPATIGPALSASPIPAT-TGRPLSASPILA 287
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 30.3 bits (65), Expect = 6.0
Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 1 MSSTYAP--STLYGTPAPMYSTTSYSYGIPYPGTTPEAWT-PAVQPNDVNNNSPQSDVEI 57
MSST+ +T + +P+P Y TTS++ P TT +W+ P Q + +SP +
Sbjct: 66 MSSTFPQHKTTSWTSPSPQYKTTSWTSPSPQYKTT--SWSLPLPQHKTTSWSSPSPKYKT 123
Query: 58 LRDLNPSHELQLPKVTHPTEFRNSYGETITNI 89
+PS + + + P + ++ ++ +I
Sbjct: 124 TSWTSPSPQYKTTSWSSPLPQQTTFLSSLYHI 155
>SB_53540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 254
Score = 29.9 bits (64), Expect = 7.9
Identities = 39/154 (25%), Positives = 61/154 (39%), Gaps = 6/154 (3%)
Query: 284 IPLEMNKNSFHNSDNKPSFADLRGVKDEDVDKYRTENNLQNIDSPLLYLKPSAPHKNHGD 343
+P+++N+ S S ++ G DE+V TE N I +P A H N G
Sbjct: 87 VPVQINRVSETTSRDRGQHFGQHGFGDENVQSQETEEN-DEIPG-YTSERPYARHGNAGT 144
Query: 344 FILSLSTPRAENEYEI-YDDAPSTTIAPKPPTLTSWDESRTDYS--HSLSPPAEEPVKSN 400
S A ++ EI + + PP+ D D + + S + S
Sbjct: 145 SSDHASADSANDDCEINCVSGEAVRLEVDPPSGVESDRMSGDTARRNYTSADGDGVSSSG 204
Query: 401 KP-KFVQIIVPYTTLRKEVDNDYSQGTKEWSIIS 433
+P ++ VP R+E SQ T E SI+S
Sbjct: 205 EPMTLLEETVPTWIRREETGQVCSQVTCEPSIVS 238
>SB_52076| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 428
Score = 29.9 bits (64), Expect = 7.9
Identities = 45/193 (23%), Positives = 72/193 (37%), Gaps = 24/193 (12%)
Query: 13 TPA-PMYSTTSYSYGIPYPGTTPEAWTPAVQPNDVNNNSPQSDVEILRDLNPSHELQLPK 71
TP+ MY T+ S + YP TTP A+ PN + + + + P+ L
Sbjct: 246 TPSLAMYPNTTQSLAM-YPNTTPSL---AMYPNTTQSLAMYPNTTQSLAMYPNTTPSLAM 301
Query: 72 VTHPTEFRNSYGETITNINVLDISYPASATAAESTKVRTEVLPHGVTNMTYPKHSLALAN 131
+ T N Y T ++ + + P+ A +T + YP + LA
Sbjct: 302 YPNITPSLNMYANTTQSLAMYPNTTPSLAMYPNTTP----------SLAMYPNTTQPLAM 351
Query: 132 PAPFTLNRGRNIHTLQPVALPNLSVSPLPPIFNARPFSPITAFPNNVVQGINQMQQTLNN 191
T + N +T QP+A+ + PL N P ++ N Q N
Sbjct: 352 YPNTTPSFAMNPNTTQPLAMYPNTTQPLAMYPNTTP---------SLAMNPNTTQPLSMN 402
Query: 192 YNVAQSIPLVEYT 204
N QS+ + YT
Sbjct: 403 PNTTQSLAMYPYT 415
>SB_51336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 257
Score = 29.9 bits (64), Expect = 7.9
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 47 NNNSPQSDVEILRDLNPSHELQLPKVTHPT-EFRNSYGETITNI 89
NNNS + E +D SH + L ++T+P+ E ++S+ + + NI
Sbjct: 17 NNNSRLTSPESKQDEKGSHSVLLREITYPSMENKSSWSQNMLNI 60
>SB_8854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 339
Score = 29.9 bits (64), Expect = 7.9
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 389 LSPPAEEPVKSNKPKFVQIIVPYTTLRKEVDNDYSQGTKEWSIISEKEFQ 438
L+P +P++ P +IVP+T L KE +S TK S + EF+
Sbjct: 72 LAPEVMQPIRVKNPPEPMVIVPHTKLEKE-RITHSWNTKAASRSATPEFE 120
>SB_867| Best HMM Match : Leo1 (HMM E-Value=0)
Length = 591
Score = 29.9 bits (64), Expect = 7.9
Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 11/118 (9%)
Query: 220 DIDAVQNTNQSKSYRNIPSSYVIDEIKDISPQASEDHISATKTSDA---SFESTGVDV-- 274
D+D ++ +++KS R ++E+ SP ED K S++ S E +G +
Sbjct: 175 DLDDSEDEDRAKSARETDEKARMNELFGDSPSEGEDEDKELKDSESRGRSDEDSGDEKES 234
Query: 275 -GNDINY----DTGIPLEMNKNSFHNSDNKPSFADLRGVKDEDVDKYRTENNLQNIDS 327
N+ +Y D+ +M+++S +S K S ADL G +E E+N + ++S
Sbjct: 235 GKNEGSYKGQGDSENDQDMDQDS-TSSKQKVSHADLFGEDEELSSDEEKEDNAREVES 291
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.310 0.128 0.370
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,712,776
Number of Sequences: 59808
Number of extensions: 1239932
Number of successful extensions: 3071
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 2985
Number of HSP's gapped (non-prelim): 89
length of query: 755
length of database: 16,821,457
effective HSP length: 88
effective length of query: 667
effective length of database: 11,558,353
effective search space: 7709421451
effective search space used: 7709421451
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 64 (29.9 bits)
- SilkBase 1999-2023 -