Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001142-TA|BGIBMGA001142-PA|IPR006671|Cyclin, N-terminal,
IPR004367|Cyclin, C-terminal, IPR006670|Cyclin, IPR011028|Cyclin-like
(511 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB2B4.03 |cig2|cyc17|cyclin Cig2|Schizosaccharomyces pombe|ch... 160 5e-40
SPBC582.03 |cdc13||cyclin Cdc13|Schizosaccharomyces pombe|chr 2|... 156 6e-39
SPCC4E9.02 |cig1|SPCC645.01|cyclin Cig1|Schizosaccharomyces pomb... 130 4e-31
SPBC16E9.17c |rem1||meiosis-specific cyclin Rem1|Schizosaccharom... 105 1e-23
SPBC19F5.01c |puc1|SPBP8B7.32c|cyclin Puc1|Schizosaccharomyces p... 74 5e-14
SPAC9E9.08 |rad26||ATRIP|Schizosaccharomyces pombe|chr 1|||Manual 34 0.054
SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces ... 33 0.094
SPBC1706.03 |fzo1|SPBC839.01|mitochondrial fusion GTPase protein... 33 0.094
SPBC13E7.10c |brf1|SPBC30D10.20|transcription factor TFIIIB comp... 33 0.12
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 32 0.22
SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces po... 31 0.50
SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharo... 30 0.67
SPBC30D10.15 |||snoRNP assembly factor |Schizosaccharomyces pomb... 30 0.88
SPBC14F5.12c |cbh2||centromere binding protein Cbh2|Schizosaccha... 29 1.2
SPAC6B12.05c |||chromatin remodeling complex subunit |Schizosacc... 29 1.2
SPCC4B3.18 |||phosphopantothenate-cysteine ligase|Schizosaccharo... 29 1.2
SPAC110.02 |pds5||cohesin-associated protein Pds5|Schizosaccharo... 29 1.5
SPAC6B12.11 |drc1|sld1|DNA replication protein Drc1|Schizosaccha... 29 2.0
SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7 |S... 29 2.0
SPAC2C4.07c |||ribonuclease II |Schizosaccharomyces pombe|chr 1|... 28 2.7
SPBC577.07 |ubp10||ubiquitin C-terminal hydrolase Ubp10|Schizosa... 28 2.7
SPBC28F2.02 |mep33||mRNA export protein Mep33|Schizosaccharomyce... 28 2.7
SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyc... 28 3.5
SPBC577.15c |||NASP family histone binding protein|Schizosacchar... 28 3.5
SPAC23H4.12 |alp13||Clr6 histone deacetylase complex subunit Alp... 27 4.7
SPAC31G5.14 |gcv1|n313|glycine decarboxylase T subunit|Schizosac... 27 4.7
SPAP27G11.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 4.7
SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces p... 27 4.7
SPCC417.09c |||transcription factor |Schizosaccharomyces pombe|c... 27 4.7
SPAC959.03c |||U3 snoRNP-associated protein Utp7|Schizosaccharom... 27 4.7
SPAC1751.01c |gti1||gluconate transporter inducer Gti1|Schizosac... 27 6.2
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 27 6.2
SPAC4F8.04 |||Brix domain protein Rpf1|Schizosaccharomyces pombe... 27 6.2
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 27 6.2
SPAC144.14 |klp8||kinesin-like protein Klp8|Schizosaccharomyces ... 27 6.2
SPCC757.11c |||membrane transporter|Schizosaccharomyces pombe|ch... 27 8.2
SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyc... 27 8.2
SPCC285.10c |||SPRY domain protein|Schizosaccharomyces pombe|chr... 27 8.2
SPBC713.06 |adl1|lig3|DNA ligase |Schizosaccharomyces pombe|chr ... 27 8.2
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 27 8.2
>SPAPB2B4.03 |cig2|cyc17|cyclin Cig2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 411
Score = 160 bits (388), Expect = 5e-40
Identities = 98/293 (33%), Positives = 155/293 (52%), Gaps = 6/293 (2%)
Query: 108 TKETKKESNFFVNAAEN-VRALCAQVEKKSLEETKPDRSREEPPLRKALQEKKDAVESPM 166
T++TK +NF +N V + + V K + +E D + + ++ + + P+
Sbjct: 35 TEKTKLSTNFEINLPRRTVLSDVSNVGKNNADEK--DTKKAKRSFDESNLSTNEEADKPV 92
Query: 167 SVVDASILSMSISKNESQIIEDVDDEEITTAQTDREMF-FYVEEYRQDIYEYMREIEVKN 225
L + SKN +E + + ++ EEY +I+EY+R++++K
Sbjct: 93 ESKFVKKLKV-YSKNADPSVETLQKDRVSNVDDHLSSNPLMAEEYAPEIFEYIRKLDLKC 151
Query: 226 RANPRYMRKQPDITHVMRSILVDWLVEVCDEYQQQSETLHLAVSYVDRFLSYMSVVRTKL 285
NP+YM +Q ++T MR IL +WLVE+ + ETL+LAV+ +DRFLS S +K
Sbjct: 152 LPNPKYMDQQKELTWKMREILNEWLVEIHSNFCLMPETLYLAVNIIDRFLSRRSCSLSKF 211
Query: 286 QLVGTAATYIAAKYEEVYPPEVSEFVYITDDTYTKREVLRMEHLILKVLSFDLSTPTSLA 345
QL G A IA+KYEEV P + FVY+TD +T +V E +L VL+FDLS P+ L
Sbjct: 212 QLTGITALLIASKYEEVMCPSIQNFVYMTDGAFTVEDVCVAERYMLNVLNFDLSYPSPLN 271
Query: 346 FLSHYCISNGLSKKTFHLASYIAELCLLEADPYLQFKPSVIAASALATARHCL 398
FL + G +T L Y+ E+ L + D L++ S IAA+A+ +R L
Sbjct: 272 FLRKISQAEGYDAQTRTLGKYLTEIYLFDHD-LLRYPMSKIAAAAMYLSRRLL 323
>SPBC582.03 |cdc13||cyclin Cdc13|Schizosaccharomyces pombe|chr
2|||Manual
Length = 482
Score = 156 bits (379), Expect = 6e-39
Identities = 95/241 (39%), Positives = 135/241 (56%), Gaps = 8/241 (3%)
Query: 158 KKDAVESPMSVVDASILSMSISKNESQIIEDVDDEEITTAQTDREMFFYVEEYRQDIYEY 217
KKD E +S + S+ ESQ +D+D E+ D M V EY DI+EY
Sbjct: 158 KKDVDERVVSKDIPKLHRDSVESPESQDWDDLDAED----WADPLM---VSEYVVDIFEY 210
Query: 218 MREIEVKNRANPRYMRKQPDITHVMRSILVDWLVEVCDEYQQQSETLHLAVSYVDRFLSY 277
+ E+E++ +P YM +Q ++ MR IL DWL+EV ++ ETL LAV+ +DRFLS
Sbjct: 211 LNELEIETMPSPTYMDRQKELAWKMRGILTDWLIEVHSRFRLLPETLFLAVNIIDRFLSL 270
Query: 278 MSVVRTKLQLVGTAATYIAAKYEEVYPPEVSEFVYITDDTYTKREVLRMEHLILKVLSFD 337
KLQLVG AA +IA+KYEEV P V FVY+ D Y + E+L+ E IL+VL F+
Sbjct: 271 RVCSLNKLQLVGIAALFIASKYEEVMCPSVQNFVYMADGGYDEEEILQAERYILRVLEFN 330
Query: 338 LSTPTSLAFLSHYCISNGLSKKTFHLASYIAELCLLEADPYLQFKPSVIAASALATARHC 397
L+ P + FL ++ +T +A Y+ E+ LL+ L + PS A+A+ AR
Sbjct: 331 LAYPNPMNFLRRISKADFYDIQTRTVAKYLVEIGLLD-HKLLPYPPSQQCAAAMYLAREM 389
Query: 398 L 398
L
Sbjct: 390 L 390
>SPCC4E9.02 |cig1|SPCC645.01|cyclin Cig1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 415
Score = 130 bits (314), Expect = 4e-31
Identities = 72/193 (37%), Positives = 111/193 (57%), Gaps = 4/193 (2%)
Query: 198 QTDREMFFYVEEYRQDIYEYMREIEVKNRANPRYMRKQPDITHVMRSILVDWLVEVCDEY 257
+TD M V +Y +I+ YM+ +E K P YM Q +I V R +LVDW+V+V +
Sbjct: 154 ETDPSM---VPDYDPEIFHYMQSLERKLAPPPNYMSVQQEIDWVTRHMLVDWIVQVQIHF 210
Query: 258 QQQSETLHLAVSYVDRFLSYMSVVRTKLQLVGTAATYIAAKYEEVYPPEVSEFVYITDDT 317
+ ETL LAV+ +DRFLS V K+QLVG +A IA KYEE++PP + F ++
Sbjct: 211 RLLPETLFLAVNLIDRFLSIKVVSLQKVQLVGLSALLIACKYEEIHPPSIYNFAHVVQGI 270
Query: 318 YTKREVLRMEHLILKVLSFDLSTPTSLAFLSHYCISNGLSKKTFHLASYIAELCLLEADP 377
+T E++R E +L +L FD+S P ++FL ++ LA Y+ E+ L++ +
Sbjct: 271 FTVDEIIRAERYMLMLLDFDISWPGPMSFLRRISRADSYDHDIRMLAKYLQEVTLMD-EI 329
Query: 378 YLQFKPSVIAASA 390
++ S IAA+A
Sbjct: 330 FIGAHISFIAATA 342
>SPBC16E9.17c |rem1||meiosis-specific cyclin
Rem1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 402
Score = 105 bits (253), Expect = 1e-23
Identities = 65/237 (27%), Positives = 120/237 (50%), Gaps = 5/237 (2%)
Query: 162 VESPMSVVDASILSMSISKNESQIIEDVDDEEITTAQTDREMFFYVEEYRQDIYEYMREI 221
V+SP V S ++I ++ E+ ++EE+ + E EY ++I +M ++
Sbjct: 98 VQSPNCSV--SEFGIAIEESNDNCAEEDEEEELQMRYSADESVSV--EYAKEILSHMEKL 153
Query: 222 EVKNRANPRYMRKQPDITHVMRSILVDWLVEVCDEYQQQSETLHLAVSYVDRFLSYMSVV 281
E++ + R+M QP MR+ +++W+V V E+L L+++ +DRFLS +V
Sbjct: 154 EIRFMPDYRHMSAQPYYVTEMRASVINWIVGVHTCINLLPESLFLSINVLDRFLSLQNVP 213
Query: 282 RTKLQLVGTAATYIAAKYEEVYPPEVSEFVYITDDTYTKREVLRMEHLILKVLSFDLSTP 341
+K++L G A +IA KYEE++PP V + + + + ++ ME +L VL + L P
Sbjct: 214 ASKMKLCGATALFIACKYEEIHPPTVKDLEIVLEGEWIGEDICGMEKYMLMVLQYQLGWP 273
Query: 342 TSLAFLSHYCISNGLSKKTFHLASYIAELCLLEADPYLQFKPSVIAASALATARHCL 398
++FL I N + + Y E+ L+E + + S + A+ T + L
Sbjct: 274 GPVSFLRLLTIVNKWESQLRIMIKYFLEVSLVE-QRFSSLRASQLVATCAYTGQSIL 329
>SPBC19F5.01c |puc1|SPBP8B7.32c|cyclin Puc1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 359
Score = 73.7 bits (173), Expect = 5e-14
Identities = 44/151 (29%), Positives = 77/151 (50%), Gaps = 2/151 (1%)
Query: 199 TDREMFFYVEEYRQDIYEYMREIEVKNRANPRYMRKQPDITHVMRSILVDWLVEVCDEYQ 258
T M Y+ EY++DI ++ E N +QP++ MR LV+++VE+ + +
Sbjct: 85 TGLSMNGYLGEYQEDIIHHLITREKNFLLNVHLSNQQPELRWSMRPALVNFIVEIHNGFD 144
Query: 259 QQSETLHLAVSYVDRFLSYMSVVRTKLQLVGTAATYIAAKYEEVYP--PEVSEFVYITDD 316
+TL L++S +D ++S V +QLV +IA+K+ E P + E +
Sbjct: 145 LSIDTLPLSISLMDSYVSRRVVYCKHIQLVACVCLWIASKFHETEDRVPLLQELKLACKN 204
Query: 317 TYTKREVLRMEHLILKVLSFDLSTPTSLAFL 347
Y + +RME IL L +D+S PT +++
Sbjct: 205 IYAEDLFIRMERHILDTLDWDISIPTPASYI 235
>SPAC9E9.08 |rad26||ATRIP|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 33.9 bits (74), Expect = 0.054
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 9/139 (6%)
Query: 45 NTKLTGLTNGTCKVQDE-NRTVRQIKNEKNIVLPLSQFRAFSVYEDKPTEVEVKKRETTY 103
N L L N + QDE R + ++K E S F +D ++ KR+
Sbjct: 107 NAALESLNNSIKQKQDEYQRKLEELKKEIEYAKTKSLFHEREA-QDAIETMKKMKRDVKN 165
Query: 104 KPFATKETKKES-NFFVNAAENVRALCAQVEKKSLEETKPDRSREEPPLRKALQEKKDAV 162
P K +++ N +++++ + K S P + + + + A D+V
Sbjct: 166 SPIMKKSHEEDGDNKLLSSSDQLAKSTKHAAKNS-----PSKKKRKTSVATAEDASTDSV 220
Query: 163 ESPMSVVDASILSMSISKN 181
S +++ DAS LS+S+ K+
Sbjct: 221 SSSIAISDAS-LSLSLMKD 238
>SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 599
Score = 33.1 bits (72), Expect = 0.094
Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 13/155 (8%)
Query: 60 DENRTVRQIKNEKNIVLPLSQFRAFSVYEDKPTEV------EVKKRETTYKPFATKETKK 113
+ N +R IKNE++ +P +++ ++ + +KK + T F K +
Sbjct: 47 ESNINIRNIKNEESYDIP-NEYLVGEIFPTNSKVIVESFSSPLKKLDGTMINFKEKNIQH 105
Query: 114 ESNFFVNAAENVRALCAQVEKKSLEETKPDRSREEPPL-RKALQEKKDA-----VESPMS 167
+ + N V++ V + + T PD S L +K E DA V P S
Sbjct: 106 DLDGVENDFATVQSASNGVHAINGKRTHPDESENPRKLPKKNFVEAIDANSPGFVYRPTS 165
Query: 168 VVDASILSMSISKNESQIIEDVDDEEITTAQTDRE 202
+ D + S NES + E + +EI + DR+
Sbjct: 166 IRDRAYSISSNHDNESTLTEGIALKEIESPDKDRK 200
>SPBC1706.03 |fzo1|SPBC839.01|mitochondrial fusion GTPase
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 758
Score = 33.1 bits (72), Expect = 0.094
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 149 PPLRKALQEKKDAVESPMSVVDASILSMSISKNESQIIEDVDDEEITTAQTDREMFFYVE 208
P RK E++ + S+V+A++ SIS++ +ED D + A FF+
Sbjct: 444 PKFRKVKHEQQFTYQKNESLVEATV--QSISQHTHSELEDAIDSLGSFASVKYSGFFFAY 501
Query: 209 EYRQDIYEYMRE-IEVKNRANPRYMRKQPD 237
+Y + + M++ +E K + Y RK+ +
Sbjct: 502 QYAISVRDAMQQYLEEKLLESEDYARKRTE 531
>SPBC13E7.10c |brf1|SPBC30D10.20|transcription factor TFIIIB complex
subunit Brf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 500
Score = 32.7 bits (71), Expect = 0.12
Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Query: 131 QVEKKSLEETKPDRSREEPPLRKALQE--KKDAVESPMSVVDASI-LSMSISKNESQI-I 186
+V+ + L +T S+E P KA + +K+ E+ I L +++ +E ++ +
Sbjct: 335 EVKSEELSQTVKVESQETPVHLKADEREIRKEVTETLKGDELRKISLQVNVKFSEEEVTL 394
Query: 187 EDVDDEEITTAQTDR-EMFFYVEEYRQDIYEYMREIEVKN 225
EDVDD+EI D+ E+ + + + +Y+ E E KN
Sbjct: 395 EDVDDDEIEDILLDKDEILTKTQVWMELNKDYLAEEEAKN 434
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 31.9 bits (69), Expect = 0.22
Identities = 26/114 (22%), Positives = 50/114 (43%), Gaps = 2/114 (1%)
Query: 89 DKPTEVEVKKRETTYKPFATKETKKESNFFVNAAENVRALCAQVEKKSLEETKPDRSREE 148
+KP++ + +E K A + +K + + + E RA + KKS+++ K + +EE
Sbjct: 24 EKPSKSKKITKEAA-KEIAKQSSKTDVSPKKSKKEAKRASSPEPSKKSVKKQKKSKKKEE 82
Query: 149 PPLRKALQEKKDAVESPMSVVDASILSMSISKNESQIIEDVDDEEITTAQTDRE 202
+ ES S ++S S +ES E ++E I + +E
Sbjct: 83 SSSESESESSSSESESSSSESESSSSESESSSSESSSSES-EEEVIVKTEEKKE 135
Score = 27.9 bits (59), Expect = 3.5
Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 1/102 (0%)
Query: 88 EDKPTEVEVKKRETTYKPFATKETKKESNFFVNAAENVRALCAQVEKKSLEETKPDRSRE 147
E +E E E+ ++ + ES+ + E V + ++ S E + S E
Sbjct: 90 ESSSSESESSSSESESSSSESESSSSESSSS-ESEEEVIVKTEEKKESSSESSSSSESEE 148
Query: 148 EPPLRKALQEKKDAVESPMSVVDASILSMSISKNESQIIEDV 189
E ++EKK++ S +S S +ES+ E+V
Sbjct: 149 EEEAVVKIEEKKESSSDSSSESSSSESESESSSSESEEEEEV 190
>SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1076
Score = 30.7 bits (66), Expect = 0.50
Identities = 35/177 (19%), Positives = 77/177 (43%), Gaps = 12/177 (6%)
Query: 151 LRKALQEKKDAVESPMSVVDASILSMSISKNESQIIEDVDDEEITTAQTDR---EMFFYV 207
LR L E K A E + S++S ++++N +I+E V ++ + A + + +
Sbjct: 747 LRSQLLEYKAANEKHTEAI-LSVVSSTLTENTGKILESVVEKSMQVALKEEIANSVRNAL 805
Query: 208 EEYRQDIYEYMRE--IEVKNRANPRYMRKQPDITHVMRSI--LVDWLVEVCDEYQQQSET 263
+ + I ++ E++N + ++ + + SI + E +Y + +E
Sbjct: 806 KNNLEKIESFLENSIAELQNSVREDFDKQTSSLAQLRYSIQNVAHAQKESEVKYNELNEQ 865
Query: 264 LHLAVSYVDRFLSYMSVVRTKLQLVGTAATYIAAKYEEVYPPEVSEFVYITDDTYTK 320
+ YV+ L + ++ + ++ TA + + Y PP V ++ DT TK
Sbjct: 866 VKTLEGYVETVLEKFNDLKIENKVPETAPDVVPSSY----PPAAESNVSVSSDTSTK 918
>SPAC3G6.01 |hrp3||ATP-dependent DNA helicase
Hrp3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1388
Score = 30.3 bits (65), Expect = 0.67
Identities = 31/130 (23%), Positives = 56/130 (43%), Gaps = 9/130 (6%)
Query: 94 VEVKKRETTYKPFATKETKKESNFFVNAAENVRALCAQVEKKSLEETKPDRSREEPPLRK 153
V+ +E + K T+ S+F + +R L + E + EE++ D S +K
Sbjct: 75 VDTDDQEDVFPSKHRKGTRNGSSF--SRHRTIRDLDDEAESVTSEESESDDSSYGGTPKK 132
Query: 154 ALQEKKDAVESPMSVVDASILSMSISKNESQIIEDVDDEEITTAQTDREMFFYVEEYRQD 213
++KK + +S S ++ NE E ++EE + EM+ Y E ++
Sbjct: 133 RSRQKKSNTYVQDEIRFSSRNSKGVNYNEDAYFESFEEEE------EEEMYEYATEVSEE 186
Query: 214 IYEYMREIEV 223
E R I+V
Sbjct: 187 -PEDTRAIDV 195
>SPBC30D10.15 |||snoRNP assembly factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 29.9 bits (64), Expect = 0.88
Identities = 19/88 (21%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 107 ATKETKKESNFFVNAAENVRALCAQVEKKSLEETKPDRSREEPPLRKALQEKKDAVESPM 166
++ +++ ++F E +A + + +S+ + P ++ E P + + EK + V P
Sbjct: 191 SSSDSESNTSFSETDVEEEKAE-EKSDAESMAPSTPPKTVNELP--EQIYEKPEIVLQPN 247
Query: 167 SVVDASILSMSISKNESQIIEDVDDEEI 194
S+++ + + K E + D+DDE+I
Sbjct: 248 SLIEPLGKIIQVLKREVVVKSDIDDEKI 275
>SPBC14F5.12c |cbh2||centromere binding protein
Cbh2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 514
Score = 29.5 bits (63), Expect = 1.2
Identities = 18/77 (23%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Query: 244 SILVDWLVEVCDEYQQQSETLHLAVSYVDRFLSYMSVVRTKLQLVGTAATYIAAKYEEVY 303
SI+ +WL D+ + + L + +V + ++ ++ +LV T ++ E+Y
Sbjct: 263 SIMEEWL-RWFDDLMKGRKVLLILDKFVAHECALENIRNSERKLVNTTVVFLPVNSTEIY 321
Query: 304 PPEVSEFVYITDDTYTK 320
P E VY Y K
Sbjct: 322 HPCGQEIVYAFKSYYRK 338
>SPAC6B12.05c |||chromatin remodeling complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 295
Score = 29.5 bits (63), Expect = 1.2
Identities = 21/85 (24%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 134 KKSLEETKPDRSREEPP-----LRKALQEKKDAVESPMSVVDASILSMSISKNESQIIED 188
+++L ET D + ++ ++ L + A E SV+D + ++ ++++ ED
Sbjct: 8 RRALVETPSDLNAQDSDSLSVSTKEELGDDALAAEEGQSVLDEQEIEEALEEDDTNYEED 67
Query: 189 VDDEEITTAQTDREMFFYVEEYRQD 213
+ D+E +AQ D E EE +D
Sbjct: 68 IIDDE-ESAQVDEEELEEEEEEEED 91
>SPCC4B3.18 |||phosphopantothenate-cysteine
ligase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 316
Score = 29.5 bits (63), Expect = 1.2
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Query: 255 DEYQQQSETLHLAVSYVDRFLSYMSVVRTKLQLVGTAAT-YIAAKYEEVY--PPEVSEFV 311
D Y + + + + + +L Y+ + +LQ++ + A Y+AA + + P E+SE
Sbjct: 136 DTYTKHHRLIMIPYTTLTEYLWYLKAIAERLQIIASRALFYLAAAVSDFHIPPKELSEHK 195
Query: 312 YITDDTYTKREVLRMEHLILKVLSFDLST 340
+ K EV +M H + K L F + T
Sbjct: 196 IQSGSGSNKLEV-KM-HPVPKFLRFLVDT 222
>SPAC110.02 |pds5||cohesin-associated protein
Pds5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1205
Score = 29.1 bits (62), Expect = 1.5
Identities = 15/45 (33%), Positives = 22/45 (48%)
Query: 304 PPEVSEFVYITDDTYTKREVLRMEHLILKVLSFDLSTPTSLAFLS 348
P + E Y+ D+T + M L+L+ LS D T + FLS
Sbjct: 445 PSSLLEVFYVNDETTNAAVEICMAELVLQYLSSDTQTRLNRLFLS 489
>SPAC6B12.11 |drc1|sld1|DNA replication protein
Drc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 337
Score = 28.7 bits (61), Expect = 2.0
Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Query: 136 SLEETKPDRSREEPPLRKALQEKKDAVESPMSVVDASILSMSISKNESQIIEDVDDEEIT 195
S E+ DR +P ++K ++ + V+ P S+ + + + + +DD E T
Sbjct: 228 SSSESLVDRDISQP-MKKKIKRQNRLVKLPPSMNLSKSHLEGLPEIDEDAENGIDDNEDT 286
Query: 196 TAQTDREMFFYVEEYRQD 213
TA D F ++ RQ+
Sbjct: 287 TASKDSSPFLDLQSERQN 304
>SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 272
Score = 28.7 bits (61), Expect = 2.0
Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 7/112 (6%)
Query: 63 RTVRQIKNEKNIVLPLSQFRAFSVYEDKPTEVEVKKRETTYKPFATKETKKESNFFVNAA 122
+ + ++K + L SQ E KP E EV K+ET + KE KKES + +
Sbjct: 124 KDILKVKEKSEKPLETSQKVEIETVETKPGEPEV-KQETNLQ----KE-KKESKVKLESK 177
Query: 123 ENVRALCAQVEKKSLEE-TKPDRSREEPPLRKALQEKKDAVESPMSVVDASI 173
E + + +S+ T+ +S + P+ +EK + ES M++ S+
Sbjct: 178 EEKISRNLRSSSRSISPVTEQPQSPKIQPVIPEKKEKSEKKESSMTLRKRSV 229
>SPAC2C4.07c |||ribonuclease II |Schizosaccharomyces pombe|chr
1|||Manual
Length = 927
Score = 28.3 bits (60), Expect = 2.7
Identities = 23/99 (23%), Positives = 45/99 (45%), Gaps = 2/99 (2%)
Query: 133 EKKSLEETKPDRSREEPPLRKALQEKKDAVESPMSVVDASILSMSISKNESQIIEDVDDE 192
+K SL ETK ++++ +P +K ++K + S + S+SK S+ +E ++
Sbjct: 83 KKASLTETKTEKAKVKPKAKKKNSKEKISKSSKQDEHKTDVHKESVSK-LSKNLESRNNR 141
Query: 193 EITTAQTDREMFFYVEEYRQDIYEYMREIEVKNRANPRY 231
+ +A+ ++ VE + E M K P Y
Sbjct: 142 DENSAKREKNNSHQVEADTNNATE-MVSSNAKKSVYPLY 179
>SPBC577.07 |ubp10||ubiquitin C-terminal hydrolase
Ubp10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 502
Score = 28.3 bits (60), Expect = 2.7
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 290 TAATYIAAKYEEVYPPEVSEFVYITDDTYTKREVLRMEHLILKVLSFDL 338
T Y+ + +V + + Y+ T+TK EV R++H LS+DL
Sbjct: 122 TLKFYVLPESYQVESSALQDIAYVMRPTFTKLEVQRLDH--TPQLSYDL 168
>SPBC28F2.02 |mep33||mRNA export protein Mep33|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 292
Score = 28.3 bits (60), Expect = 2.7
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 120 NAAENVRALCAQVEKKSLEETKPDRSREEPPLRKALQEKKDAVESPMSVVDA 171
N + V+A Q+E+ + D R+E LRK +E+K A E+ + V A
Sbjct: 36 NRSTKVQAKIRQIEQNAAASGSKDAKRQE-ALRKRREEEKRAAEAAKAEVAA 86
>SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 358
Score = 27.9 bits (59), Expect = 3.5
Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Query: 42 HNRNTKLTGLTNGTCKVQDENRTVRQIKNEKNIVLPLSQFRAFSVYEDKPTEVEVKKRET 101
+ +N + N KV +++ + +E + L +A + YE +P EV RE
Sbjct: 12 NTKNKNAEEMFNELNKVPFFMQSLEDVGDESENNVQLDALKALA-YEGEPHEVAQNFREH 70
Query: 102 TYKPFATKETKKESNFFVNA 121
+ FA+K K F+ A
Sbjct: 71 GNECFASKRYKDAEEFYTKA 90
>SPBC577.15c |||NASP family histone binding
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 396
Score = 27.9 bits (59), Expect = 3.5
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 8/84 (9%)
Query: 97 KKRETTYKPFATKETKKESNFFVNAAENVRALCAQVEKKSLEETKPDRSREEPPLRKALQ 156
++ E T K K+ +ES + EN+R + +++E+K+L D P L +A+
Sbjct: 284 RENEVTDKKGKGKQKAEESTL-TSDLENLREMLSELEQKTL-----DLKHGAPSLEEAVM 337
Query: 157 EKKDAVESPMSVVDASILSMSISK 180
K ES + D+S L+ ++++
Sbjct: 338 SKMH--ESSLLSKDSSSLAQAVAE 359
>SPAC23H4.12 |alp13||Clr6 histone deacetylase complex subunit
Alp13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 337
Score = 27.5 bits (58), Expect = 4.7
Identities = 23/112 (20%), Positives = 51/112 (45%), Gaps = 5/112 (4%)
Query: 169 VDASILSMSISKNESQIIEDVDDEEITTAQTDREMFFYVEEYRQDIYEYMRE--IEVKNR 226
V A+I + SK S + ++D + A ++F +Y + R+ +E++ +
Sbjct: 204 VRAAIAAFRESKI-SHLNNEIDVDVFEQAMAGLVIYFNKCLGNMLLYRFERQQYLEIRQQ 262
Query: 227 ANPRYMRKQPDITHVMRSILVDWLVEVCDEYQQQSETLHLAVSYVDRFLSYM 278
M + H++R + L E+ D S+++ ++Y++ FL Y+
Sbjct: 263 YPDTEMCDLYGVEHLIRLFVS--LPELIDRTNMDSQSIECLLNYIEEFLKYL 312
>SPAC31G5.14 |gcv1|n313|glycine decarboxylase T
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 387
Score = 27.5 bits (58), Expect = 4.7
Identities = 15/48 (31%), Positives = 22/48 (45%)
Query: 51 LTNGTCKVQDENRTVRQIKNEKNIVLPLSQFRAFSVYEDKPTEVEVKK 98
+TN C +DE + I+N K + L Q RA + T V+K
Sbjct: 133 VTNAACSEKDEANLKKHIENWKGVELERVQGRALIAIQGPETASVVQK 180
>SPAP27G11.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 689
Score = 27.5 bits (58), Expect = 4.7
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 307 VSEFVYITDDTYTKREVLRMEHLILKVLSFDLSTPT-SLAFLSHYCIS----NGLSKKTF 361
+SEFV+ + T ++ + ++ LILK + + +F SH+ IS N + +
Sbjct: 509 LSEFVHQRQKSLTPKQRIAIQELILKFMQRNFENSLYHQSFSSHWFISRLLINPIRMLCW 568
Query: 362 HLASYIAELCLLEADPYLQFK----PSVIAASAL 391
H+ L L EA+ L++ P +I S+L
Sbjct: 569 HITDVGKTLDLGEAEKLLKYNHKQCPYIIYPSSL 602
>SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 555
Score = 27.5 bits (58), Expect = 4.7
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 114 ESNFFVNAAENVRA-LCAQVEKKSLEETKPDRSREEPPLRKALQEKKDAVESPMSVVDA 171
ES +V E+ R + EK+ E++K R +EE + A ++ D+ S SVV A
Sbjct: 475 ESYKYVREIESHRIHFSKEEEKREREKSKGIRGQEEEFIENADEDNNDSSSSSGSVVSA 533
>SPCC417.09c |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 767
Score = 27.5 bits (58), Expect = 4.7
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 109 KETKKESNFFVNAAE-NVRALCAQVEKKSLEETKPDRSREE--PP---LRKALQEKKDAV 162
+E ++ N V ++ N A A+ KKS +KP R R E PP +RKA+
Sbjct: 29 EEEERGGNVVVGSSSANANASTAETGKKSAGGSKPKRRRGERIPPSKRIRKAIAYVNKYA 88
Query: 163 ESPMSVVDASIL-SMSISKNESQIIED 188
V+ ++ + SIS++ +Q + D
Sbjct: 89 SGCFGRVERRLVCTRSISRHSNQKLLD 115
>SPAC959.03c |||U3 snoRNP-associated protein
Utp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 520
Score = 27.5 bits (58), Expect = 4.7
Identities = 18/81 (22%), Positives = 33/81 (40%)
Query: 69 KNEKNIVLPLSQFRAFSVYEDKPTEVEVKKRETTYKPFATKETKKESNFFVNAAENVRAL 128
K ++I++P S + YE+ P +++ET + K + + + NV
Sbjct: 371 KGFESIIVPGSGEPNYDSYENDPFASRKQRQETEVRQLLEKLRPEMISLNADFIGNVDRA 430
Query: 129 CAQVEKKSLEETKPDRSREEP 149
+ K EE KP + P
Sbjct: 431 APSLRKAEAEEEKPPEEKWVP 451
>SPAC1751.01c |gti1||gluconate transporter inducer
Gti1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 27.1 bits (57), Expect = 6.2
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 164 SPMSVVDASILSMSISKNESQIIEDVDDEEITTAQT 199
SP+S V++S LS +IS+N+S + ++ + Q+
Sbjct: 392 SPISGVESSSLSSAISRNQSNLSSFQQQQQFSALQS 427
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 27.1 bits (57), Expect = 6.2
Identities = 42/183 (22%), Positives = 75/183 (40%), Gaps = 19/183 (10%)
Query: 57 KVQDENRTVRQIKNEKNIVLPLSQFRAFSVYEDK--PTEVEVKKRET---TYKPFATKE- 110
K+ NR V +K EKN + S+ F Y DK E+E +K +T ++K T E
Sbjct: 259 KLSSNNRNVEILKEEKNDL--ESKLYRFEEYRDKVATLELENEKIQTELNSWKSLITNEL 316
Query: 111 --TKKESNFFV-------NAAENVRALCAQVEKKSLEETKPDRSREEPPLRKALQEKKDA 161
+ SN V N E V +L +Q+ K + ++ + + + K+
Sbjct: 317 PTPEAVSNKLVFLQNTNANLGERVSSLESQLSNKPANQPLGANEKDAAHITELETKLKEL 376
Query: 162 VESPMSVVDASILSMSISKNESQIIEDVDDEE--ITTAQTDREMFFYVEEYRQDIYEYMR 219
E + L+ + ++ DDEE ++ TD + +E + + EY
Sbjct: 377 HEQNRRLQRQKSLATQEIDLLRENLKSYDDEEAILSEKNTDMKKLERIEGLVKLVDEYKL 436
Query: 220 EIE 222
++E
Sbjct: 437 KLE 439
>SPAC4F8.04 |||Brix domain protein Rpf1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 306
Score = 27.1 bits (57), Expect = 6.2
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 14/102 (13%)
Query: 113 KESNFFVNAAENVRALCAQVEKKSLEETKPDRSREEP--PLRKALQEKKDAVESPMSVVD 170
K N V + ++AL Q K LE K +R++EE P +K L+ ++ +
Sbjct: 3 KIKNKIVRQQQYMKAL-HQKNKDKLERRK-ERAKEEEKDPEKKRLRLSEN--------IP 52
Query: 171 ASILSMSISKNESQIIEDVDDEEITTAQTDREMFFYVEEYRQ 212
A+I S + + IIED DEE+ D E Y E R+
Sbjct: 53 ATIESKRVY--DETIIEDKPDEELQAELKDDEFSAYFSEERK 92
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 27.1 bits (57), Expect = 6.2
Identities = 25/116 (21%), Positives = 51/116 (43%), Gaps = 5/116 (4%)
Query: 99 RETTYKPFATKETKKESNFFVNAAENVRALCAQVEKKSLEETKPDRSREEPPLRKALQEK 158
+E ++ P + K+ F E++R A + K L+ + + + + +
Sbjct: 157 QEESFWPLSEPANLKKR--FDEIFESLRYAKALDQIKGLKRDQETQVKVDQATLTHYRSD 214
Query: 159 KDAVESPMSVVDASILSMSISKNESQIIEDVDDEEITTAQTDREMFFYVEEYRQDI 214
K+ E V S+ +S +++ +E++D E TA+ E+F EEY Q +
Sbjct: 215 KERAEKIELRVHESLKRISCIRSK---VEELDQEITETARLQDELFKSTEEYEQQM 267
>SPAC144.14 |klp8||kinesin-like protein Klp8|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 511
Score = 27.1 bits (57), Expect = 6.2
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 191 DEEITTAQTDREMFFYVEEYRQDIYEYMREI 221
D+ +TT ++DRE EE+ Q + +++ EI
Sbjct: 377 DDILTTLESDREQLRRHEEHSQKLLKFIEEI 407
>SPCC757.11c |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 471
Score = 26.6 bits (56), Expect = 8.2
Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Query: 334 LSFDLSTPTSLAFLSHYCISNGLSKKTFHLASYIAELCLLEADPYLQFK-PSVIAASALA 392
+SF + PTS F+ H NGLS L + I L LL P L+F P +
Sbjct: 63 ISFTIVVPTSERFVQHLGGGNGLSGVIIGLPT-ITALVLLY--PMLRFSTPKAAKGYTIY 119
Query: 393 TARHCLLCEQC 403
+ + C C
Sbjct: 120 RRPYTMSCISC 130
>SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 442
Score = 26.6 bits (56), Expect = 8.2
Identities = 26/118 (22%), Positives = 53/118 (44%), Gaps = 11/118 (9%)
Query: 98 KRETTYKPFATKETKKESNFFVNAAENV--RALCAQVEKKSLEETKPDRSREEPPLRKAL 155
+RE + A KK+ AAE +A A KK+ E+ K + R++ ++ AL
Sbjct: 302 EREAGAREAAAAAQKKKEEEERRAAEEAAAKASAAAANKKAKEDKKKAQKRDKKVVKNAL 361
Query: 156 QEKK--DAVESPMS------VVDASILSMSISKNE-SQIIEDVDDEEITTAQTDREMF 204
++ A + P + + D ++ + + E Q+ D++ E+ A + + +F
Sbjct: 362 KDFNYFSATDVPSAEHVDSVLKDVDVIMSKLGEGELGQLAADINAEKAAGAASVQAVF 419
>SPCC285.10c |||SPRY domain protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 382
Score = 26.6 bits (56), Expect = 8.2
Identities = 15/63 (23%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Query: 188 DVDDEEITTAQTDREMFFYVEEYRQDIYEYMREIEVKN-RANPRYMRKQPDITHVMRSIL 246
++DDE + D E F +++ ++ Y RE E+ + ++N K D V +
Sbjct: 64 ELDDEALENEHIDEEGFSLLDDMGKERYLQAREFELNSMKSNVNTDAKLLDFLQVQEKGV 123
Query: 247 VDW 249
+ W
Sbjct: 124 LAW 126
>SPBC713.06 |adl1|lig3|DNA ligase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 774
Score = 26.6 bits (56), Expect = 8.2
Identities = 24/108 (22%), Positives = 46/108 (42%), Gaps = 6/108 (5%)
Query: 22 DLFSTNQRRALGDLSHFACNHNRNTKLTGLTNGTCKVQD-ENRTVRQIKNEKNIVLPLSQ 80
DLFS + + + +H+++ ++ D EN+ K K++++P +
Sbjct: 31 DLFSKREAQLTDTPNKLLTDHDQSASDYAYALKLQQLFDSENQATAPEKLPKDVIIPEEE 90
Query: 81 FRA--FSVYE---DKPTEVEVKKRETTYKPFATKETKKESNFFVNAAE 123
+ F+V + DKP E V E F+T K+S +A +
Sbjct: 91 YHTDTFNVVKESNDKPKENLVTSEECKASFFSTDSVNKDSTIDYDALQ 138
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 26.6 bits (56), Expect = 8.2
Identities = 24/103 (23%), Positives = 42/103 (40%), Gaps = 4/103 (3%)
Query: 92 TEVEVKKRETTYKPFATKETKKESNFFVNAAENVRALCAQVEKKSLEETKPDRSREEPPL 151
TE +VK +ET K+ K +S + E + A V+ K + + D E+
Sbjct: 454 TETDVKAKETDSIEANDKDEKTDSKETEDKVEETESKEADVKAKETDSIEVDDKEEKTDS 513
Query: 152 RKALQEKKDAVESPMSVVDASILSMSISKNESQIIEDVDDEEI 194
+ E D VE S + +K ++ E VD +++
Sbjct: 514 K----ETADKVEQTDSKDTNEKPAKDDNKEANEKAEKVDSKDV 552
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.130 0.374
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,290,141
Number of Sequences: 5004
Number of extensions: 96507
Number of successful extensions: 390
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 365
Number of HSP's gapped (non-prelim): 51
length of query: 511
length of database: 2,362,478
effective HSP length: 76
effective length of query: 435
effective length of database: 1,982,174
effective search space: 862245690
effective search space used: 862245690
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 56 (26.6 bits)
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