Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001141-TA|BGIBMGA001141-PA|IPR001660|Sterile alpha motif
SAM, IPR011510|Sterile alpha motif homology 2,
IPR002195|Dihydroorotase, IPR010993|Sterile alpha motif homology
(391 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78546-3|CAB01771.3| 920|Caenorhabditis elegans Hypothetical pr... 125 6e-29
Z50794-6|CAA90660.1| 1139|Caenorhabditis elegans Hypothetical pr... 69 6e-12
AF170122-1|AAD47840.1| 1139|Caenorhabditis elegans liprin-alpha ... 69 6e-12
U61952-9|AAB03165.1| 1321|Caenorhabditis elegans Temporarily ass... 39 0.007
U61952-8|AAB03166.1| 1372|Caenorhabditis elegans Temporarily ass... 39 0.007
U40953-2|AAB52647.1| 483|Caenorhabditis elegans Hypothetical pr... 33 0.46
U13645-10|AAM15546.1| 418|Caenorhabditis elegans Hypothetical p... 32 0.80
U13645-9|AAM15545.1| 597|Caenorhabditis elegans Hypothetical pr... 32 0.80
U13645-8|AAM15544.1| 565|Caenorhabditis elegans Hypothetical pr... 32 0.80
U28740-4|AAA68319.2| 276|Caenorhabditis elegans Temporarily ass... 30 3.2
Z49936-5|CAE47467.1| 801|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z49936-3|CAD90174.1| 1000|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z49936-2|CAA90181.1| 586|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z49936-1|CAA90182.1| 930|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 29 4.3
AY834228-1|AAV91314.1| 589|Caenorhabditis elegans Toll and inte... 29 4.3
AY834227-1|AAV91313.1| 984|Caenorhabditis elegans Toll and inte... 29 4.3
AY834226-1|AAV91312.1| 931|Caenorhabditis elegans Toll and inte... 29 4.3
Z35719-2|CAA84799.2| 715|Caenorhabditis elegans Hypothetical pr... 29 7.5
>Z78546-3|CAB01771.3| 920|Caenorhabditis elegans Hypothetical
protein T21H8.1 protein.
Length = 920
Score = 125 bits (301), Expect = 6e-29
Identities = 98/329 (29%), Positives = 143/329 (43%), Gaps = 19/329 (5%)
Query: 31 SLREVRSRLGSGSVRLEGDEFSRSSLRASSTPRQKQQTMPWQTTDIR-------QWDCET 83
SLR + S+L + + + + F R S S++ + T T R W E
Sbjct: 559 SLRNIFSKLTRSTSQDQSNSFRRGSAARSTSTARLGSTNHLGTVSKRPPLSQFVDWRSEQ 618
Query: 84 TCGWLESIGMEQYAPAARAWLGAGDARGVLANASHSTIEKELAIKHPMHKKKILLAIMDL 143
W+ IG QY + +G R L N S + E L IK+P+H+K++ + L
Sbjct: 619 LADWIAEIGYPQYMNEVSRHVRSG--RHFL-NMSMNEYEGVLNIKNPVHRKRVAI----L 671
Query: 144 LGSHGDELLTAAGALSGAWVLRWLEDVGVCXXXXXXXXXXXXXXXXHRLTXXXXXXXXXX 203
L ++++ A LRWL+D+G+ LT
Sbjct: 672 LRRIEEDIMEPANKWDVHQTLRWLDDIGLPQYKDVFAENVVDGPLLLSLTANDAVEMKVV 731
Query: 204 XXXXXXXSIRRGIQVLRDNKFNPDTMIRRXXXXXXXXXXXXXXXXXXXXRWSSHRVMQWL 263
++ R IQ L+ F + M + RW+ +WL
Sbjct: 732 NAHHYA-TLARSIQFLKKADFRFNAMEK----LIDQNIVEKYPCPDVVVRWTHSATCEWL 786
Query: 264 KEIDLAEYAPNLRGAGVHGGLMLLEPRFTAELLAALLNIPANKTLLRRHLTQRFNDLLGR 323
++IDLAE+ NL AGV G LM+ EP FTAE LA +L +P +KTLLRRHLT FN LLG
Sbjct: 787 RKIDLAEFTQNLLFAGVPGALMIYEPSFTAESLAEILQMPPHKTLLRRHLTSHFNQLLGP 846
Query: 324 DVIQQKRNAEQTLGYQPLTATTKYKVPKK 352
+I KR+ Y ++ T + KV KK
Sbjct: 847 KIIADKRDFLAAGNYPQISPTGRVKVVKK 875
>Z50794-6|CAA90660.1| 1139|Caenorhabditis elegans Hypothetical protein
F59F5.6 protein.
Length = 1139
Score = 68.9 bits (161), Expect = 6e-12
Identities = 60/257 (23%), Positives = 104/257 (40%), Gaps = 20/257 (7%)
Query: 74 TDIRQWDCETTCGWLES-IGMEQ-YAPAARAWLGAGDARGVLANASHSTIEKELAIKHPM 131
T W+ T WLE +GM Y A RA + +G +++ S I+KE+ I +P+
Sbjct: 862 TPFALWNGPTVVAWLELWVGMPAWYVAACRANVKSG---AIMSALSDQEIQKEIGISNPL 918
Query: 132 HKKKILLAIMDLLGSHGDE------LLTAAGALSGAWVLR-WLEDVGVCXXXXXXXXXXX 184
H+ K+ LAI +++ L A G ++ ++ WL +G+
Sbjct: 919 HRLKLRLAIQEMVSLTSPSAPRTARLTLAFGDMNHEYIGNDWLPCLGLAQYRSAFMECLL 978
Query: 185 XXXXXHRLTXXXXXXXXXXXXXXXXXSIRRGIQVLRDNKFNPDTMIRRXXXXXXXXXXXX 244
L+ S++ GI L+ ++ + R
Sbjct: 979 DARMLEHLSKRDLRTHLRMVDTFHRTSLQYGIMCLKKVNYDKKVLADRRKACDNINTDLL 1038
Query: 245 XXXXXXXXRWSSHRVMQWLKEIDLAEYAPNLRGAGVHGGLMLLEPRFTAELLAALLNIPA 304
WS+ RV +W++EI L ++ NL +G+HG L+ L+ F A A L I +
Sbjct: 1039 V--------WSNERVQRWVEEIGLGVFSRNLVDSGIHGALIALDETFDASAFAYALQIGS 1090
Query: 305 NKTLLRRHLTQRFNDLL 321
R+ L ++F L+
Sbjct: 1091 QDVPNRQLLEKKFIGLV 1107
>AF170122-1|AAD47840.1| 1139|Caenorhabditis elegans liprin-alpha
homolog SYD-2 protein.
Length = 1139
Score = 68.9 bits (161), Expect = 6e-12
Identities = 60/257 (23%), Positives = 104/257 (40%), Gaps = 20/257 (7%)
Query: 74 TDIRQWDCETTCGWLES-IGMEQ-YAPAARAWLGAGDARGVLANASHSTIEKELAIKHPM 131
T W+ T WLE +GM Y A RA + +G +++ S I+KE+ I +P+
Sbjct: 862 TPFALWNGPTVVAWLELWVGMPAWYVAACRANVKSG---AIMSALSDQEIQKEIGISNPL 918
Query: 132 HKKKILLAIMDLLGSHGDE------LLTAAGALSGAWVLR-WLEDVGVCXXXXXXXXXXX 184
H+ K+ LAI +++ L A G ++ ++ WL +G+
Sbjct: 919 HRLKLRLAIQEMVSLTSPSAPRTARLTLAFGDMNHEYIGNDWLPCLGLAQYRSAFMECLL 978
Query: 185 XXXXXHRLTXXXXXXXXXXXXXXXXXSIRRGIQVLRDNKFNPDTMIRRXXXXXXXXXXXX 244
L+ S++ GI L+ ++ + R
Sbjct: 979 DARMLEHLSKRDLRTHLRMVDTFHRTSLQYGIMCLKKVNYDKKVLADRRKACDNINTDLL 1038
Query: 245 XXXXXXXXRWSSHRVMQWLKEIDLAEYAPNLRGAGVHGGLMLLEPRFTAELLAALLNIPA 304
WS+ RV +W++EI L ++ NL +G+HG L+ L+ F A A L I +
Sbjct: 1039 V--------WSNERVQRWVEEIGLGVFSRNLVDSGIHGALIALDETFDASAFAYALQIGS 1090
Query: 305 NKTLLRRHLTQRFNDLL 321
R+ L ++F L+
Sbjct: 1091 QDVPNRQLLEKKFIGLV 1107
>U61952-9|AAB03165.1| 1321|Caenorhabditis elegans Temporarily assigned
gene nameprotein 137, isoform b protein.
Length = 1321
Score = 38.7 bits (86), Expect = 0.007
Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 6/92 (6%)
Query: 53 RSSLRASSTPRQKQQTMPWQTTDIRQWDCETTCGWLESIGMEQYAPAARAWLGAGDARG- 111
RS A R ++ P+ +I W E C WL SIGM +Y R D +G
Sbjct: 1146 RSRFTAWFHKRFGTRSAPFAFANIPYWTSEEVCAWLSSIGMSEYGSTFR----KNDIQGS 1201
Query: 112 VLANASHSTIEKELAIKHPMHKKKILLAIMDL 143
L + S I ++ I H K++ AI+DL
Sbjct: 1202 ELMHLERSDI-MDIGITKIGHVKRLQSAIVDL 1232
Score = 29.5 bits (63), Expect = 4.3
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 254 WSSHRVMQWLKEIDLAEYAPNLRGAGVHGG-LMLLE 288
W+S V WL I ++EY R + G LM LE
Sbjct: 1172 WTSEEVCAWLSSIGMSEYGSTFRKNDIQGSELMHLE 1207
>U61952-8|AAB03166.1| 1372|Caenorhabditis elegans Temporarily assigned
gene nameprotein 137, isoform a protein.
Length = 1372
Score = 38.7 bits (86), Expect = 0.007
Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 6/92 (6%)
Query: 53 RSSLRASSTPRQKQQTMPWQTTDIRQWDCETTCGWLESIGMEQYAPAARAWLGAGDARG- 111
RS A R ++ P+ +I W E C WL SIGM +Y R D +G
Sbjct: 1197 RSRFTAWFHKRFGTRSAPFAFANIPYWTSEEVCAWLSSIGMSEYGSTFR----KNDIQGS 1252
Query: 112 VLANASHSTIEKELAIKHPMHKKKILLAIMDL 143
L + S I ++ I H K++ AI+DL
Sbjct: 1253 ELMHLERSDI-MDIGITKIGHVKRLQSAIVDL 1283
Score = 29.5 bits (63), Expect = 4.3
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 254 WSSHRVMQWLKEIDLAEYAPNLRGAGVHGG-LMLLE 288
W+S V WL I ++EY R + G LM LE
Sbjct: 1223 WTSEEVCAWLSSIGMSEYGSTFRKNDIQGSELMHLE 1258
>U40953-2|AAB52647.1| 483|Caenorhabditis elegans Hypothetical
protein F53B1.2 protein.
Length = 483
Score = 32.7 bits (71), Expect = 0.46
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 75 DIRQWDCETTCGWLESIGMEQYAPAARAWLGAGDARGVLANASHSTIEKELAIKHPMHKK 134
D +W CE WL+ IGM +YA A D + +LA + ++I K
Sbjct: 10 DPNEWRCEDVGNWLKKIGMAKYADLI-AMKHKVDGKCLLALTDTDLKDPPVSINCLGDIK 68
Query: 135 KILLAI 140
KIL AI
Sbjct: 69 KILFAI 74
>U13645-10|AAM15546.1| 418|Caenorhabditis elegans Hypothetical
protein C05D10.4c protein.
Length = 418
Score = 31.9 bits (69), Expect = 0.80
Identities = 23/96 (23%), Positives = 42/96 (43%), Gaps = 6/96 (6%)
Query: 43 SVRLEGDEFSRSSLRASSTPRQKQQTMPWQTTDIRQWDCETTCGWLESIGMEQYAPAARA 102
S + E R S + + ++K W+ +++W + WL+S M+ A
Sbjct: 187 STAMSNMEQHRVSKKRTRRAKEKMSQAAWKRKTVKEWSLDDVLLWLQSAQMDDVA----G 242
Query: 103 WLGAGDARGV-LANASHSTIEKELAIKHPMHKKKIL 137
L D RG L + T+ +L + +P +KK+L
Sbjct: 243 LLIGYDLRGEDLLQWNDQTL-AQLGVSNPEIRKKLL 277
>U13645-9|AAM15545.1| 597|Caenorhabditis elegans Hypothetical
protein C05D10.4b protein.
Length = 597
Score = 31.9 bits (69), Expect = 0.80
Identities = 23/96 (23%), Positives = 42/96 (43%), Gaps = 6/96 (6%)
Query: 43 SVRLEGDEFSRSSLRASSTPRQKQQTMPWQTTDIRQWDCETTCGWLESIGMEQYAPAARA 102
S + E R S + + ++K W+ +++W + WL+S M+ A
Sbjct: 366 STAMSNMEQHRVSKKRTRRAKEKMSQAAWKRKTVKEWSLDDVLLWLQSAQMDDVA----G 421
Query: 103 WLGAGDARGV-LANASHSTIEKELAIKHPMHKKKIL 137
L D RG L + T+ +L + +P +KK+L
Sbjct: 422 LLIGYDLRGEDLLQWNDQTL-AQLGVSNPEIRKKLL 456
>U13645-8|AAM15544.1| 565|Caenorhabditis elegans Hypothetical
protein C05D10.4a protein.
Length = 565
Score = 31.9 bits (69), Expect = 0.80
Identities = 23/96 (23%), Positives = 42/96 (43%), Gaps = 6/96 (6%)
Query: 43 SVRLEGDEFSRSSLRASSTPRQKQQTMPWQTTDIRQWDCETTCGWLESIGMEQYAPAARA 102
S + E R S + + ++K W+ +++W + WL+S M+ A
Sbjct: 334 STAMSNMEQHRVSKKRTRRAKEKMSQAAWKRKTVKEWSLDDVLLWLQSAQMDDVA----G 389
Query: 103 WLGAGDARGV-LANASHSTIEKELAIKHPMHKKKIL 137
L D RG L + T+ +L + +P +KK+L
Sbjct: 390 LLIGYDLRGEDLLQWNDQTL-AQLGVSNPEIRKKLL 424
>U28740-4|AAA68319.2| 276|Caenorhabditis elegans Temporarily
assigned gene nameprotein 132 protein.
Length = 276
Score = 29.9 bits (64), Expect = 3.2
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 283 GLMLLEPRFTAELLAALLNIPANKTLLRRHLTQRFNDLLG 322
G++ + FT + AA+ NIP + LL++H F +LLG
Sbjct: 79 GIVGFQLLFTIGICAAIYNIPNSNQLLQKHAWIVFPNLLG 118
>Z49936-5|CAE47467.1| 801|Caenorhabditis elegans Hypothetical
protein F13B10.1e protein.
Length = 801
Score = 29.5 bits (63), Expect = 4.3
Identities = 14/65 (21%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Query: 79 WDCETTCGWLESIGMEQYAPAARAWLGAGDARGVLANASHSTIEKELAIKHPMHKKKILL 138
W C W++ IG E+Y + GD +L + + ++ ++ + +H+K+ L
Sbjct: 431 WTCADVQYWVKKIGFEEYVEKFAKQMVDGD---LLLQLTENDLKHDVGMISGLHRKRFLR 487
Query: 139 AIMDL 143
+ L
Sbjct: 488 ELQTL 492
>Z49936-3|CAD90174.1| 1000|Caenorhabditis elegans Hypothetical
protein F13B10.1c protein.
Length = 1000
Score = 29.5 bits (63), Expect = 4.3
Identities = 14/65 (21%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Query: 79 WDCETTCGWLESIGMEQYAPAARAWLGAGDARGVLANASHSTIEKELAIKHPMHKKKILL 138
W C W++ IG E+Y + GD +L + + ++ ++ + +H+K+ L
Sbjct: 614 WTCADVQYWVKKIGFEEYVEKFAKQMVDGD---LLLQLTENDLKHDVGMISGLHRKRFLR 670
Query: 139 AIMDL 143
+ L
Sbjct: 671 ELQTL 675
>Z49936-2|CAA90181.1| 586|Caenorhabditis elegans Hypothetical
protein F13B10.1b protein.
Length = 586
Score = 29.5 bits (63), Expect = 4.3
Identities = 14/65 (21%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Query: 79 WDCETTCGWLESIGMEQYAPAARAWLGAGDARGVLANASHSTIEKELAIKHPMHKKKILL 138
W C W++ IG E+Y + GD +L + + ++ ++ + +H+K+ L
Sbjct: 219 WTCADVQYWVKKIGFEEYVEKFAKQMVDGD---LLLQLTENDLKHDVGMISGLHRKRFLR 275
Query: 139 AIMDL 143
+ L
Sbjct: 276 ELQTL 280
>Z49936-1|CAA90182.1| 930|Caenorhabditis elegans Hypothetical
protein F13B10.1a protein.
Length = 930
Score = 29.5 bits (63), Expect = 4.3
Identities = 14/65 (21%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Query: 79 WDCETTCGWLESIGMEQYAPAARAWLGAGDARGVLANASHSTIEKELAIKHPMHKKKILL 138
W C W++ IG E+Y + GD +L + + ++ ++ + +H+K+ L
Sbjct: 560 WTCADVQYWVKKIGFEEYVEKFAKQMVDGD---LLLQLTENDLKHDVGMISGLHRKRFLR 616
Query: 139 AIMDL 143
+ L
Sbjct: 617 ELQTL 621
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical protein
C33B4.3a protein.
Length = 1110
Score = 29.5 bits (63), Expect = 4.3
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 254 WSSHRVMQWLKEIDLAEYAPNLRGAGVHG 282
WS V+ WL + L+EY P R ++G
Sbjct: 1048 WSVDDVIGWLSSLHLSEYTPAFRSQRING 1076
Score = 28.7 bits (61), Expect = 7.5
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 79 WDCETTCGWLESIGMEQYAPAARA 102
W + GWL S+ + +Y PA R+
Sbjct: 1048 WSVDDVIGWLSSLHLSEYTPAFRS 1071
>AY834228-1|AAV91314.1| 589|Caenorhabditis elegans Toll and
interleukin 1 receptordomain protein isoform f protein.
Length = 589
Score = 29.5 bits (63), Expect = 4.3
Identities = 14/65 (21%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Query: 79 WDCETTCGWLESIGMEQYAPAARAWLGAGDARGVLANASHSTIEKELAIKHPMHKKKILL 138
W C W++ IG E+Y + GD +L + + ++ ++ + +H+K+ L
Sbjct: 219 WTCADVQYWVKKIGFEEYVEKFAKQMVDGD---LLLQLTENDLKHDVGMISGLHRKRFLR 275
Query: 139 AIMDL 143
+ L
Sbjct: 276 ELQTL 280
>AY834227-1|AAV91313.1| 984|Caenorhabditis elegans Toll and
interleukin 1 receptordomain protein isoform c protein.
Length = 984
Score = 29.5 bits (63), Expect = 4.3
Identities = 14/65 (21%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Query: 79 WDCETTCGWLESIGMEQYAPAARAWLGAGDARGVLANASHSTIEKELAIKHPMHKKKILL 138
W C W++ IG E+Y + GD +L + + ++ ++ + +H+K+ L
Sbjct: 614 WTCADVQYWVKKIGFEEYVEKFAKQMVDGD---LLLQLTENDLKHDVGMISGLHRKRFLR 670
Query: 139 AIMDL 143
+ L
Sbjct: 671 ELQTL 675
>AY834226-1|AAV91312.1| 931|Caenorhabditis elegans Toll and
interleukin 1 receptordomain protein isoform a protein.
Length = 931
Score = 29.5 bits (63), Expect = 4.3
Identities = 14/65 (21%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Query: 79 WDCETTCGWLESIGMEQYAPAARAWLGAGDARGVLANASHSTIEKELAIKHPMHKKKILL 138
W C W++ IG E+Y + GD +L + + ++ ++ + +H+K+ L
Sbjct: 561 WTCADVQYWVKKIGFEEYVEKFAKQMVDGD---LLLQLTENDLKHDVGMISGLHRKRFLR 617
Query: 139 AIMDL 143
+ L
Sbjct: 618 ELQTL 622
>Z35719-2|CAA84799.2| 715|Caenorhabditis elegans Hypothetical
protein F17C8.3 protein.
Length = 715
Score = 28.7 bits (61), Expect = 7.5
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 134 KKILLAIMDLLGSHGDELLTAAGALSGAWVLRWLEDVG 171
+++L + L SHG +LL AGAL GA ++ + DVG
Sbjct: 538 QELLEKLTKLSLSHGKKLLIPAGALWGANDIQKMADVG 575
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.319 0.134 0.413
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,023,592
Number of Sequences: 27539
Number of extensions: 284008
Number of successful extensions: 703
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 675
Number of HSP's gapped (non-prelim): 40
length of query: 391
length of database: 12,573,161
effective HSP length: 83
effective length of query: 308
effective length of database: 10,287,424
effective search space: 3168526592
effective search space used: 3168526592
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 60 (28.3 bits)
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