Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001140-TA|BGIBMGA001140-PA|IPR013838|Beta tubulin,
autoregulation binding site
(540 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72502-8|CAA96592.1| 140|Caenorhabditis elegans Hypothetical pr... 38 0.014
Z78546-3|CAB01771.3| 920|Caenorhabditis elegans Hypothetical pr... 38 0.024
U67955-2|AAB07583.2| 791|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical pr... 30 3.6
Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical pr... 30 3.6
X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin prot... 30 3.6
AF038613-11|AAB92054.2| 836|Caenorhabditis elegans Mammalian el... 30 3.6
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 30 4.7
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 30 4.7
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 30 4.7
AL110501-2|CAE47474.1| 1271|Caenorhabditis elegans Hypothetical ... 30 4.7
AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical ... 30 4.7
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 29 6.3
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z75529-3|CAA99786.2| 1099|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical p... 29 6.3
Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical pr... 29 6.3
X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein. 29 6.3
U80437-5|AAV58881.1| 527|Caenorhabditis elegans Neurabin protei... 29 6.3
U80437-3|AAK68243.1| 561|Caenorhabditis elegans Neurabin protei... 29 6.3
U80437-2|AAL16317.1| 658|Caenorhabditis elegans Neurabin protei... 29 6.3
U80437-1|AAB37620.1| 721|Caenorhabditis elegans Neurabin protei... 29 6.3
U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myos... 29 6.3
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 29 6.3
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 29 6.3
Z81111-6|CAB03269.1| 332|Caenorhabditis elegans Hypothetical pr... 29 8.3
Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical p... 29 8.3
Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical pr... 29 8.3
U70848-4|AAB09108.1| 869|Caenorhabditis elegans Hypothetical pr... 29 8.3
U29380-10|AAO38582.1| 454|Caenorhabditis elegans Hypothetical p... 29 8.3
U29380-9|AAA68745.1| 472|Caenorhabditis elegans Hypothetical pr... 29 8.3
>Z72502-8|CAA96592.1| 140|Caenorhabditis elegans Hypothetical
protein C08B6.10 protein.
Length = 140
Score = 38.3 bits (85), Expect = 0.014
Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Query: 276 RNEETPPDLHRRWNSYEHFR--WPEGGWW--PPMCWCHGPPIPPP 316
R+ PP W+ + H R W G WW PP W PP PPP
Sbjct: 89 RDRGPPPPDFDGWHHHHHHRPPWMRGPWWRRPPPPWGPPPPGPPP 133
>Z78546-3|CAB01771.3| 920|Caenorhabditis elegans Hypothetical
protein T21H8.1 protein.
Length = 920
Score = 37.5 bits (83), Expect = 0.024
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Query: 323 SWPS-HPSLPQTTVRGGFKNDAEDRVRRLEADKXXXXXXXXXXXXXISAQTEKMVDLERA 381
SW S PS +TV + +D++ RL + + AQ EK+ DLE
Sbjct: 154 SWISLSPSPSMSTVSCPEYPELQDKLHRLAMARDSLQLQVSVLSEQVGAQKEKIKDLETV 213
Query: 382 LHEAKQRLDDAEQKLQKE---MLQRSSLETQKLELLSKLSEV 420
+ + L E+ LQ + + + LE++K++LL+++S +
Sbjct: 214 IALKRNNLTSTEELLQDKYHRIDECQELESKKMDLLAEVSSL 255
>U67955-2|AAB07583.2| 791|Caenorhabditis elegans Hypothetical
protein C16H3.3a protein.
Length = 791
Score = 31.5 bits (68), Expect = 1.6
Identities = 26/128 (20%), Positives = 48/128 (37%), Gaps = 5/128 (3%)
Query: 19 HNRTAGEKPPIPIKSRANTESKHSQLEKEISEKQSRRASGGSERPLSTASETSERDSAXX 78
H + K P+ S A + + + E+E E++ S S +P+ T T E+ +
Sbjct: 72 HEHASKAKKEFPMGSSAKKKKSYEEEEEEEEEEEDELPSTSS-KPIKTPKPTPEKKNTPS 130
Query: 79 XXXXXXXXQEMSFLLSPMS----DCEYLTEPFDEDQERATAGFMHPAVRSYMYSPMGGDS 134
++ E L E +ED E F P + S + +P
Sbjct: 131 KAKLAAMKKKADAARRKAQREAKKLEALGEKQEEDDEDPDDSFAMPILESSVDTPGEAPK 190
Query: 135 DSPDEATV 142
+ +E+T+
Sbjct: 191 EEIEESTI 198
>Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 30.3 bits (65), Expect = 3.6
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 378 LERALHEAKQRLDDAEQKLQKEMLQRSSLETQKLELLSKLSE 419
L LHEAK+ L DA +KL + L+ + L + EL + L E
Sbjct: 432 LHDELHEAKEALADANRKLHELDLENARLAGEIRELQTALKE 473
>Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 30.3 bits (65), Expect = 3.6
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 378 LERALHEAKQRLDDAEQKLQKEMLQRSSLETQKLELLSKLSE 419
L LHEAK+ L DA +KL + L+ + L + EL + L E
Sbjct: 432 LHDELHEAKEALADANRKLHELDLENARLAGEIRELQTALKE 473
>X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin
protein.
Length = 882
Score = 30.3 bits (65), Expect = 3.6
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 378 LERALHEAKQRLDDAEQKLQKEMLQRSSLETQKLELLSKLSE 419
L LHEAK+ L DA +KL + L+ + L + EL + L E
Sbjct: 448 LHDELHEAKEALADANRKLHELDLENARLAGEIRELQTALKE 489
>AF038613-11|AAB92054.2| 836|Caenorhabditis elegans Mammalian
elks/cast/erc/rab6 interactingprotein homolog protein 1
protein.
Length = 836
Score = 30.3 bits (65), Expect = 3.6
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 368 ISAQTEKMVDLERALHEAKQRLDDA 392
+ +Q EK+ D+ R L +AK+RLDDA
Sbjct: 550 LESQNEKIGDMNRDLVQAKKRLDDA 574
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical protein
T28C6.9 protein.
Length = 1861
Score = 29.9 bits (64), Expect = 4.7
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 7/69 (10%)
Query: 340 KNDAEDRVRRLEADKXXXXXXXXXXXXXISAQTEKM-VDLERALHEAKQRLDDAEQKLQ- 397
+N+ R+ +LE+ K +Q E M V +E+ L+E ++ LDD +++L+
Sbjct: 1452 RNELTARIEQLESQKSNEQAQMSEKL----SQVESMKVQIEQKLYETREELDDLKKELKL 1507
Query: 398 KEM-LQRSS 405
KE+ LQ++S
Sbjct: 1508 KEIELQKAS 1516
>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
protein C18C4.5b protein.
Length = 1046
Score = 29.9 bits (64), Expect = 4.7
Identities = 18/70 (25%), Positives = 31/70 (44%)
Query: 341 NDAEDRVRRLEADKXXXXXXXXXXXXXISAQTEKMVDLERALHEAKQRLDDAEQKLQKEM 400
N +D +RR E I Q ++ DL R+L EAK++L ++ Q E
Sbjct: 339 NLLQDELRRTEEKYQQAQKKIENLDETIKQQETQIRDLGRSLDEAKRQLQKMSEQRQNEE 398
Query: 401 LQRSSLETQK 410
+ R ++ +
Sbjct: 399 VARQGEDSAR 408
Score = 29.9 bits (64), Expect = 4.7
Identities = 19/79 (24%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 342 DAEDRVRRLEADKXXXXXXXXXXXXXISAQTEKMVDLERALHEAKQRLDDAEQKLQKEML 401
+AED RL+A + Q E +++ER L + L+ ++L+K
Sbjct: 691 EAEDLADRLQAAQILSGNVESKFS---DMQKESKIEMERILDNHNKELEKLREELKKSHT 747
Query: 402 QRSSLETQKLELLSKLSEV 420
+ +SLE+ E ++L+++
Sbjct: 748 EHTSLESVLEEQQNELAQL 766
>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
protein C18C4.5a protein.
Length = 1022
Score = 29.9 bits (64), Expect = 4.7
Identities = 18/70 (25%), Positives = 31/70 (44%)
Query: 341 NDAEDRVRRLEADKXXXXXXXXXXXXXISAQTEKMVDLERALHEAKQRLDDAEQKLQKEM 400
N +D +RR E I Q ++ DL R+L EAK++L ++ Q E
Sbjct: 339 NLLQDELRRTEEKYQQAQKKIENLDETIKQQETQIRDLGRSLDEAKRQLQKMSEQRQNEE 398
Query: 401 LQRSSLETQK 410
+ R ++ +
Sbjct: 399 VARQGEDSAR 408
Score = 29.9 bits (64), Expect = 4.7
Identities = 19/79 (24%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 342 DAEDRVRRLEADKXXXXXXXXXXXXXISAQTEKMVDLERALHEAKQRLDDAEQKLQKEML 401
+AED RL+A + Q E +++ER L + L+ ++L+K
Sbjct: 691 EAEDLADRLQAAQILSGNVESKFS---DMQKESKIEMERILDNHNKELEKLREELKKSHT 747
Query: 402 QRSSLETQKLELLSKLSEV 420
+ +SLE+ E ++L+++
Sbjct: 748 EHTSLESVLEEQQNELAQL 766
>AL110501-2|CAE47474.1| 1271|Caenorhabditis elegans Hypothetical
protein Y79H2A.3b protein.
Length = 1271
Score = 29.9 bits (64), Expect = 4.7
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 379 ERALHEAKQRL--DDAEQKLQKEMLQRSSLETQKLELLSKLSE 419
+R L EAK++L D + +L+KE LQR E K E K+ +
Sbjct: 1061 QRRLDEAKEKLAIDKEKLRLKKEALQRELEERNKAERQKKMDD 1103
>AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical
protein Y79H2A.3a protein.
Length = 2129
Score = 29.9 bits (64), Expect = 4.7
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 379 ERALHEAKQRL--DDAEQKLQKEMLQRSSLETQKLELLSKLSE 419
+R L EAK++L D + +L+KE LQR E K E K+ +
Sbjct: 1061 QRRLDEAKEKLAIDKEKLRLKKEALQRELEERNKAERQKKMDD 1103
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 29.5 bits (63), Expect = 6.3
Identities = 18/86 (20%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 341 NDAEDRVRRLEADKXXXXXXXXXXXXXISAQTEKMVDLERA-------LHEAKQRLDDAE 393
+DAE+R+ +LEA + ++ ++ D++RA + K+++ D E
Sbjct: 908 SDAEERLAKLEAQQKDASKQLSELNDQLADNEDRTADVQRAKKKIEAEVEALKKQIQDLE 967
Query: 394 QKLQKEMLQRSSLETQKLELLSKLSE 419
L+K ++ S + Q L ++ +
Sbjct: 968 MSLRKAESEKQSKDHQIRSLQDEMQQ 993
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 29.5 bits (63), Expect = 6.3
Identities = 18/86 (20%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 341 NDAEDRVRRLEADKXXXXXXXXXXXXXISAQTEKMVDLERA-------LHEAKQRLDDAE 393
+DAE+R+ +LEA + ++ ++ D++RA + K+++ D E
Sbjct: 908 SDAEERLAKLEAQQKDASKQLSELNDQLADNEDRTADVQRAKKKIEAEVEALKKQIQDLE 967
Query: 394 QKLQKEMLQRSSLETQKLELLSKLSE 419
L+K ++ S + Q L ++ +
Sbjct: 968 MSLRKAESEKQSKDHQIRSLQDEMQQ 993
>Z75529-3|CAA99786.2| 1099|Caenorhabditis elegans Hypothetical
protein C44H9.4 protein.
Length = 1099
Score = 29.5 bits (63), Expect = 6.3
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 465 NTHMYSSLPRSSVLASEARVAFGNKHSMVVARGRGHSVPNLGLYRYHTPSRGFETPISDP 524
N+ +YS +SVL ++ V G+ + V+ GR N + H S+ F I +P
Sbjct: 359 NSSIYSLNTEASVLVAQKCVIMGSSAAQTVSNGR-FDGRNFQMTNIHRKSQNFRFSIDNP 417
Query: 525 RSSRT 529
T
Sbjct: 418 SKQPT 422
>Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 29.5 bits (63), Expect = 6.3
Identities = 16/71 (22%), Positives = 31/71 (43%)
Query: 340 KNDAEDRVRRLEADKXXXXXXXXXXXXXISAQTEKMVDLERALHEAKQRLDDAEQKLQKE 399
+ E+ +L A++ +A EK+ L A E ++ L+DA +L +
Sbjct: 877 RKSQEEAYAKLSAERSKLLEALELTQGGSAAIEEKLTRLNSARQEVEKSLNDANDRLSEH 936
Query: 400 MLQRSSLETQK 410
+ + LE Q+
Sbjct: 937 EEKNADLEKQR 947
>Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 29.5 bits (63), Expect = 6.3
Identities = 16/71 (22%), Positives = 31/71 (43%)
Query: 340 KNDAEDRVRRLEADKXXXXXXXXXXXXXISAQTEKMVDLERALHEAKQRLDDAEQKLQKE 399
+ E+ +L A++ +A EK+ L A E ++ L+DA +L +
Sbjct: 877 RKSQEEAYAKLSAERSKLLEALELTQGGSAAIEEKLTRLNSARQEVEKSLNDANDRLSEH 936
Query: 400 MLQRSSLETQK 410
+ + LE Q+
Sbjct: 937 EEKNADLEKQR 947
>X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein.
Length = 1938
Score = 29.5 bits (63), Expect = 6.3
Identities = 16/71 (22%), Positives = 31/71 (43%)
Query: 340 KNDAEDRVRRLEADKXXXXXXXXXXXXXISAQTEKMVDLERALHEAKQRLDDAEQKLQKE 399
+ E+ +L A++ +A EK+ L A E ++ L+DA +L +
Sbjct: 877 RKSQEEAYAKLSAERSKLLEALELTQGGSAAIEEKLTRLNSARQEVEKSLNDANDRLSEH 936
Query: 400 MLQRSSLETQK 410
+ + LE Q+
Sbjct: 937 EEKNADLEKQR 947
>U80437-5|AAV58881.1| 527|Caenorhabditis elegans Neurabin protein
1, isoform e protein.
Length = 527
Score = 29.5 bits (63), Expect = 6.3
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 373 EKMVDLERALHEAKQRLDDAEQKLQKEMLQRSSLETQKL-ELLSKLSE 419
+K V + + K+R+D+ E KL++ +R S++ +L EL KL E
Sbjct: 287 DKDVHYASLVRQLKERIDELESKLEEAEERRHSIQNLELIELREKLKE 334
>U80437-3|AAK68243.1| 561|Caenorhabditis elegans Neurabin protein
1, isoform b protein.
Length = 561
Score = 29.5 bits (63), Expect = 6.3
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 373 EKMVDLERALHEAKQRLDDAEQKLQKEMLQRSSLETQKL-ELLSKLSE 419
+K V + + K+R+D+ E KL++ +R S++ +L EL KL E
Sbjct: 321 DKDVHYASLVRQLKERIDELESKLEEAEERRHSIQNLELIELREKLKE 368
>U80437-2|AAL16317.1| 658|Caenorhabditis elegans Neurabin protein
1, isoform d protein.
Length = 658
Score = 29.5 bits (63), Expect = 6.3
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 373 EKMVDLERALHEAKQRLDDAEQKLQKEMLQRSSLETQKL-ELLSKLSE 419
+K V + + K+R+D+ E KL++ +R S++ +L EL KL E
Sbjct: 418 DKDVHYASLVRQLKERIDELESKLEEAEERRHSIQNLELIELREKLKE 465
>U80437-1|AAB37620.1| 721|Caenorhabditis elegans Neurabin protein
1, isoform a protein.
Length = 721
Score = 29.5 bits (63), Expect = 6.3
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 373 EKMVDLERALHEAKQRLDDAEQKLQKEMLQRSSLETQKL-ELLSKLSE 419
+K V + + K+R+D+ E KL++ +R S++ +L EL KL E
Sbjct: 481 DKDVHYASLVRQLKERIDELESKLEEAEERRHSIQNLELIELREKLKE 528
>U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myosin
heavy chain II protein.
Length = 2003
Score = 29.5 bits (63), Expect = 6.3
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 378 LERALHEAKQRLDDAEQKLQKEMLQRSSLETQKLELLSKL 417
LER + E + +LDDA ++ KE R E + ++ +L
Sbjct: 1119 LEREIREIRAQLDDAIEETNKEQAARQKAEKARRDMAEEL 1158
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 29.5 bits (63), Expect = 6.3
Identities = 10/14 (71%), Positives = 10/14 (71%)
Query: 303 PPMCWCHGPPIPPP 316
PPMC C PP PPP
Sbjct: 44 PPMCGCAPPPPPPP 57
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 29.5 bits (63), Expect = 6.3
Identities = 18/86 (20%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 341 NDAEDRVRRLEADKXXXXXXXXXXXXXISAQTEKMVDLERA-------LHEAKQRLDDAE 393
+DAE+R+ +LEA + ++ ++ D++RA + K+++ D E
Sbjct: 911 SDAEERLAKLEAQQKDASKQLSELNDQLADNEDRTADVQRAKKKIEAEVEALKKQIQDLE 970
Query: 394 QKLQKEMLQRSSLETQKLELLSKLSE 419
L+K ++ S + Q L ++ +
Sbjct: 971 MSLRKAESEKQSKDHQIRSLQDEMQQ 996
>Z81111-6|CAB03269.1| 332|Caenorhabditis elegans Hypothetical
protein T01G5.7 protein.
Length = 332
Score = 29.1 bits (62), Expect = 8.3
Identities = 16/44 (36%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 377 DLERALHEAKQRLDDAEQKLQKEMLQRSSLETQKLELLSKLSEV 420
D+E+ L E Q+L A +L ++ + +SLETQ+ +L+++LS++
Sbjct: 57 DIEKVL-ETNQKLQLAFAELDEQSEKINSLETQQHKLVAELSKM 99
>Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical
protein F20G4.3 protein.
Length = 2003
Score = 29.1 bits (62), Expect = 8.3
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 378 LERALHEAKQRLDDAEQKLQKEMLQRSSLETQKLELLSKL 417
LER + E + +LDDA ++ KE R E + ++ +L
Sbjct: 1119 LEREIREIRAQLDDAIEETNKEKAARQKAEKARRDMAEEL 1158
>Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical protein
F20G4.3 protein.
Length = 2003
Score = 29.1 bits (62), Expect = 8.3
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 378 LERALHEAKQRLDDAEQKLQKEMLQRSSLETQKLELLSKL 417
LER + E + +LDDA ++ KE R E + ++ +L
Sbjct: 1119 LEREIREIRAQLDDAIEETNKEKAARQKAEKARRDMAEEL 1158
>U70848-4|AAB09108.1| 869|Caenorhabditis elegans Hypothetical
protein C43G2.2 protein.
Length = 869
Score = 29.1 bits (62), Expect = 8.3
Identities = 14/41 (34%), Positives = 26/41 (63%)
Query: 379 ERALHEAKQRLDDAEQKLQKEMLQRSSLETQKLELLSKLSE 419
E+ L E K+ L+ E+K KE+ ++LE ++ +L ++L E
Sbjct: 116 EQELAEKKEELESIEKKHSKEIDSGAALEDERRKLRAELKE 156
>U29380-10|AAO38582.1| 454|Caenorhabditis elegans Hypothetical
protein ZK546.14b protein.
Length = 454
Score = 29.1 bits (62), Expect = 8.3
Identities = 14/54 (25%), Positives = 26/54 (48%)
Query: 19 HNRTAGEKPPIPIKSRANTESKHSQLEKEISEKQSRRASGGSERPLSTASETSE 72
H++ +K P+K A+ ++ K+ +KQ ++A SE S+ E E
Sbjct: 75 HSKVQPQKVVAPVKRPADQNKNKEKVVKKDQKKQDKKADSDSEEDDSSDDEEKE 128
>U29380-9|AAA68745.1| 472|Caenorhabditis elegans Hypothetical
protein ZK546.14a protein.
Length = 472
Score = 29.1 bits (62), Expect = 8.3
Identities = 14/54 (25%), Positives = 26/54 (48%)
Query: 19 HNRTAGEKPPIPIKSRANTESKHSQLEKEISEKQSRRASGGSERPLSTASETSE 72
H++ +K P+K A+ ++ K+ +KQ ++A SE S+ E E
Sbjct: 93 HSKVQPQKVVAPVKRPADQNKNKEKVVKKDQKKQDKKADSDSEEDDSSDDEEKE 146
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.312 0.128 0.390
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,984,885
Number of Sequences: 27539
Number of extensions: 480570
Number of successful extensions: 1557
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1494
Number of HSP's gapped (non-prelim): 74
length of query: 540
length of database: 12,573,161
effective HSP length: 85
effective length of query: 455
effective length of database: 10,232,346
effective search space: 4655717430
effective search space used: 4655717430
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 62 (29.1 bits)
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