Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001139-TA|BGIBMGA001139-PA|IPR007087|Zinc finger,
C2H2-type
(473 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 67 6e-12
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 65 2e-11
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 55 2e-08
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 54 4e-08
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 54 6e-08
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 50 7e-07
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 49 1e-06
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 49 1e-06
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 48 4e-06
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 46 9e-06
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 36 0.016
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 35 0.021
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 35 0.028
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 33 0.066
SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces ... 32 0.20
SPAC16C9.06c |upf1||ATP-dependent RNA helicase Upf1|Schizosaccha... 29 1.1
SPAC24H6.02c |||TIM23 translocase complex subunit Tim15|Schizosa... 29 1.1
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 29 1.4
SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1 |Schizos... 29 1.4
SPBPB7E8.01 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 29 1.9
SPBC21C3.02c |sds3||Sds3-like family protein|Schizosaccharomyces... 29 1.9
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 28 2.5
SPAC2H10.01 |||transcription factor, zf-fungal binuclear cluster... 28 2.5
SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme Fub2|Schiz... 28 3.3
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 28 3.3
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 27 4.3
SPBC106.01 |mph1|SPBC1271.16c, SPBC243.01|dual specificity prote... 27 4.3
SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr 1|||... 27 5.7
SPBC2F12.11c |rep2||transcriptional activator Rep2|Schizosacchar... 27 5.7
SPCC1393.10 |ctr4||copper transporter complex subunit Ctr4 |Schi... 27 5.7
SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces pomb... 27 5.7
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 26 9.9
SPBC359.01 ||SPBPB10D8.08|amino acid permease, unknown 7|Schizos... 26 9.9
SPCC1902.02 |mug72|SPCC663.16c|ketopantoate reductase |Schizosac... 26 9.9
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 26 9.9
SPAC2G11.15c |tgs1|SPAC521.01c|RNA methyltransferase Tgs1 |Schiz... 26 9.9
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 66.9 bits (156), Expect = 6e-12
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 90 CNMKFSNGANMRRHKMRHTGVKPYECRVCQKRFFRKDHLAEHFTTHTKSLPYHCPICNRG 149
CN +F+ N++ H HT +P++C +C+K F R+ H HT + C CN+
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQR 636
Query: 150 FQRQIAMRAHFQNEHVGQHDL 170
F R A+ H+++E VGQ+ L
Sbjct: 637 FARMDALNRHYKSE-VGQNCL 656
Score = 55.2 bits (127), Expect = 2e-08
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 69 NVAAAQNTDTRPHRKIFECDVCNMKFSNGANMRRHKMRHTGVKPYECRVCQKRFFRKDHL 128
N+ + NT T + + F+C +C F+ + RRH+ HTG+K + C C +RF R D L
Sbjct: 586 NLKSHMNTHT--NYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQRFARMDAL 643
Query: 129 AEHF 132
H+
Sbjct: 644 NRHY 647
Score = 27.1 bits (57), Expect = 5.7
Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Query: 421 VCTF--CSITFPDSTLYFLHKGCHCDSNPWKCNICGEQCCNVYEFNSH 466
VCTF C+ F + H H + P++C+IC + ++ H
Sbjct: 571 VCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRH 618
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 64.9 bits (151), Expect = 2e-11
Identities = 37/128 (28%), Positives = 55/128 (42%), Gaps = 6/128 (4%)
Query: 74 QNTDTRPHRKIFECDV--CNMKFSNGANMRRHKMRHTGVKPYECRV--CQKRFFRKDHLA 129
Q+ T + + F CD C+ F ++++ HK HT VKP+ C C +F+ + HL
Sbjct: 42 QHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCHYDGCDAQFYTQQHLE 101
Query: 130 EHFTTHTKSLPYHCPI--CNRGFQRQIAMRAHFQNEHVGQHDLVKTCPLCSYRAPTMKSL 187
H H K PY C C+ F + +R+H H T C R T + L
Sbjct: 102 RHIEVHRKPKPYACTWEGCDECFSKHQQLRSHISACHTHLLPYPCTYQDCELRFATKQKL 161
Query: 188 RVHFLNRH 195
+ H H
Sbjct: 162 QNHVNRAH 169
Score = 54.8 bits (126), Expect = 2e-08
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query: 74 QNTDTRPHRKIFEC--DVCNMKFSNGANMRRHKMRHTGVKPYECRV--CQKRFFRKDHLA 129
++ + R +KIF C + C K+S + + +H H+ +P+ C C K F+RK HL
Sbjct: 12 ESKNLRSAKKIFHCPYEECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLK 71
Query: 130 EHFTTHTKSLPYHCPI--CNRGFQRQIAMRAHFQ 161
H HT P+ C C+ F Q + H +
Sbjct: 72 IHKRCHTNVKPFSCHYDGCDAQFYTQQHLERHIE 105
Score = 48.4 bits (110), Expect = 2e-06
Identities = 36/121 (29%), Positives = 53/121 (43%), Gaps = 18/121 (14%)
Query: 79 RPHRKIFE-CDVCNMKFSNGANMRRH-KMRHTGVKPYECRV--CQKRFFRKDHLAEHFT- 133
+P+ +E CD C FS +R H HT + PY C C+ RF K L H
Sbjct: 111 KPYACTWEGCDEC---FSKHQQLRSHISACHTHLLPYPCTYQDCELRFATKQKLQNHVNR 167
Query: 134 THTKSLPYHCP----ICNRGFQRQIAMRAHFQNEHVGQHDLVKTCPLCSYRAPTMKSLRV 189
H K + Y CP + + GF++ ++ H + H V +C +C + T LR
Sbjct: 168 AHEKIISYSCPHESCVGHEGFEKWSQLQNHIREAH------VPSCSICGRQFKTAAHLRH 221
Query: 190 H 190
H
Sbjct: 222 H 222
Score = 45.2 bits (102), Expect = 2e-05
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 7/82 (8%)
Query: 87 CDVCNMKFSNGANMRRHKMRHTGV----KPYECRV--CQKRFFRKDHLAEHFTT-HTKSL 139
C +C +F A++R H + H K Y C + C+K F R L +H + H ++
Sbjct: 206 CSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGNM 265
Query: 140 PYHCPICNRGFQRQIAMRAHFQ 161
+HC C F + ++ H +
Sbjct: 266 AFHCDSCGTKFGYKHMLQRHLE 287
Score = 26.2 bits (55), Expect = 9.9
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 423 TFCSITFPDSTLYFLHKGCHCDSNPWKCNICG 454
T CS F + +HK CH + P+ C+ G
Sbjct: 58 TGCSKAFYRKSHLKIHKRCHTNVKPFSCHYDG 89
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 54.8 bits (126), Expect = 2e-08
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 80 PHRKIFECDVCNMKFSNGANMRRH-KMRHTGVKPYECRVCQKRFFRKDHLAEHFTTHTKS 138
P K F C C+ KF ++RRH + HT KP+ C +C KRF R+D+L +H H +
Sbjct: 418 PGGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVNA 476
Query: 139 LP 140
P
Sbjct: 477 SP 478
Score = 45.2 bits (102), Expect = 2e-05
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 98 ANMRRHKMRHTGVKPYECRVCQKRFFRKDHLAEHF-TTHTKSLPYHCPICNRGFQRQIAM 156
+N + R G K + C C K+F R +HL H + HT P+ C IC + F R+ +
Sbjct: 408 SNRKTSVPRSPGGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNL 466
Query: 157 RAH 159
R H
Sbjct: 467 RQH 469
Score = 29.9 bits (64), Expect = 0.81
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 143 CPICNRGFQRQIAMRAHFQNEHVGQHDLVKTCPLCSYRAPTMKSLRVH 190
CP C++ F+R +R H ++ H + V C +C R +LR H
Sbjct: 425 CPECSKKFKRSEHLRRHIRSLHTSEKPFV--C-ICGKRFSRRDNLRQH 469
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 54.0 bits (124), Expect = 4e-08
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 113 YEC--RVCQKRFFRKDHLAEHFTTHTKSLPYHCPICNRGFQRQIAMRAHFQNEHVGQHD 169
Y+C + C K F RK+H HF +HT S + CP C+ F R + H +HV Q+D
Sbjct: 17 YKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHVNQKHVKQND 75
Score = 35.9 bits (79), Expect = 0.012
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Query: 85 FECDV--CNMKFSNGANMRRHKMRHTGVKPYECRVCQKRFFRKDHLAEH 131
++CD C F+ + RRH HT K + C C F R D L H
Sbjct: 17 YKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRH 65
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 53.6 bits (123), Expect = 6e-08
Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 83 KIFECDVCNMKFSNGANMRRHKMRHTGVKPYECRV--CQKRFFRKDHLAEHFTTHTK 137
K +EC C F + RH HTG KP+EC C+KRF R+D L H TH +
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTHLR 58
Score = 44.8 bits (101), Expect = 3e-05
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 110 VKPYECRVCQKRFFRKDHLAEHFTTHTKSLPYHC--PICNRGFQRQIAMRAH 159
+K YEC C++ F R++H H +HT P+ C P C + F R+ + H
Sbjct: 1 MKSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRH 52
Score = 30.3 bits (65), Expect = 0.61
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Query: 141 YHCPICNRGFQRQIAMRAHFQNEHVGQHDLVKTCPLCSYR 180
Y CP C R F RQ H ++ H G+ + P C R
Sbjct: 4 YECPFCKRVFHRQEHQVRHIRS-HTGEKPFECSYPSCKKR 42
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 50.0 bits (114), Expect = 7e-07
Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Query: 90 CNMKFSNGANMRRHKMRHTGVKPYECRVCQKRFFRKDHLAEHFTTHTKSLPYHCPICNRG 149
CN + + N+ H H +PY C +C+ F R L H H PY C C +
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CLKR 508
Query: 150 FQRQIAMRAHFQ 161
F R A+ H Q
Sbjct: 509 FNRLDALNRHKQ 520
Score = 43.2 bits (97), Expect = 8e-05
Identities = 17/50 (34%), Positives = 24/50 (48%)
Query: 118 CQKRFFRKDHLAEHFTTHTKSLPYHCPICNRGFQRQIAMRAHFQNEHVGQ 167
C KR RK ++ H TH PY C +C GF R ++ H + G+
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGR 499
Score = 40.3 bits (90), Expect = 6e-04
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 85 FECDVCNMKFSNGANMRRHKMRHTGVKPYECRVCQKRFFRKDHLAEH 131
+ CD+C F +++RH H +PY C C KRF R D L H
Sbjct: 473 YRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CLKRFNRLDALNRH 518
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 49.2 bits (112), Expect = 1e-06
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 101 RRHKMRHTGVKPYECRV--CQKRFFRKDHLAEHFTTHTKSLPYHCPICNRGFQRQIAMRA 158
+R + G + C C K F RK+HL H TH + C CNR F R +
Sbjct: 14 KRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNR 73
Query: 159 HFQNEHVGQHDL 170
H Q H+ + +L
Sbjct: 74 HVQQMHLQKQNL 85
Score = 39.1 bits (87), Expect = 0.001
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 90 CNMKFSNGANMRRHKMRHTGVKPYECRVCQKRFFRKDHLAEH 131
C F+ ++RRH+ H VK + C C + F R D L H
Sbjct: 33 CPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRH 74
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 49.2 bits (112), Expect = 1e-06
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 66 DNNNVAAAQNTDTRPH----RKIFECDVCNMKFSNGANMRRHKMRHTGVKPYECRVCQKR 121
++ NV +A+ T P +++F CD C +F+ N+ RHK H+ +P C C+ +
Sbjct: 8 NSTNVLSAKRKLTEPSLIDSKRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIK 67
Query: 122 FFRKDHLAEH 131
RKD L H
Sbjct: 68 CKRKDLLKRH 77
Score = 44.8 bits (101), Expect = 3e-05
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 113 YECRVCQKRFFRKDHLAEHFTTHTKSLPYHCPICNRGFQRQIAMRAHFQNEH 164
+ C C KRF R ++L H H+K+ P CP C +R+ ++ H Q H
Sbjct: 31 FPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFH 82
Score = 26.6 bits (56), Expect = 7.5
Identities = 11/36 (30%), Positives = 14/36 (38%)
Query: 422 CTFCSITFPDSTLYFLHKGCHCDSNPWKCNICGEQC 457
C C+ F HK CH + P C C +C
Sbjct: 33 CDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKC 68
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 47.6 bits (108), Expect = 4e-06
Identities = 31/123 (25%), Positives = 56/123 (45%), Gaps = 9/123 (7%)
Query: 18 LNTEKNEPVATVSKETSKRGTTLKCTTCN-DFSTSSVRTLSTHMGQCFPDNNNVAAAQNT 76
+ E P+A+ + S+ + + N D TS+ T S+ P ++ AA ++
Sbjct: 1 MTRESLAPIASKANTLSESKVSENLMSINSDSGTSNANTPSSVTSNSKPVASSTAAKKDP 60
Query: 77 DTRPHR-KIFECDVCNMKFSNGANMRRHKMRHTGVKPYECRV-------CQKRFFRKDHL 128
+ P + K + C+ C F+ +++RH HT KP+ C C ++F R+D L
Sbjct: 61 NAPPQKVKQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLL 120
Query: 129 AEH 131
H
Sbjct: 121 LRH 123
Score = 42.3 bits (95), Expect = 1e-04
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 7/62 (11%)
Query: 110 VKPYECRVCQKRFFRKDHLAEHFTTHTKSLPYHC------PI-CNRGFQRQIAMRAHFQN 162
VK Y C C + F R +HL H +HT P+ C P C R F R+ + H Q
Sbjct: 67 VKQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQK 126
Query: 163 EH 164
H
Sbjct: 127 IH 128
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 46.4 bits (105), Expect = 9e-06
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 111 KPYECRVCQKRFFRKDHLAEHFTTHTKSLPYHC--PICNRGFQRQIAMRAH 159
+PY+C +C K F+R +H H THT P+ C P C + F R + H
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRH 74
Score = 46.4 bits (105), Expect = 9e-06
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Query: 85 FECDVCNMKFSNGANMRRHKMRHTGVKPYECRV--CQKRFFRKDHLAEHFTTHTKS 138
++C +C F + RH HTG KP+ C C KRF R D L H HT +
Sbjct: 26 YKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHTNA 81
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 35.5 bits (78), Expect = 0.016
Identities = 34/123 (27%), Positives = 49/123 (39%), Gaps = 25/123 (20%)
Query: 51 SSVRTLSTHMGQCFP----DNNNVAAAQNTDTRPH--------RKIFECDVCNMKFSNGA 98
S V TL+++ Q P ++N + N D R H RKI + + S+ A
Sbjct: 405 SVVATLASNSAQAHPMGQQSDSNYSDHHNNDKRAHVSRRHSTSRKIAQSHTGSSSTSSAA 464
Query: 99 NMRRHKMRHTGVKPYECRVCQKRFFRKDHLAEHFTTHTKSLPYHCPI--CNRGFQRQIAM 156
N+R Y C C + F R L H +HT P+ C C + F + M
Sbjct: 465 NVR-----------YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNM 513
Query: 157 RAH 159
R H
Sbjct: 514 RRH 516
Score = 34.3 bits (75), Expect = 0.037
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query: 85 FECDVCNMKFSNGANMRRHKMRHTGVKPYECRV--CQKRFFRKDHLAEHFTTH 135
+ C C FS ++++ H HTG +P+ C C K F + ++ H H
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 35.1 bits (77), Expect = 0.021
Identities = 32/141 (22%), Positives = 66/141 (46%), Gaps = 10/141 (7%)
Query: 208 SVSVLAAGIANAAYGEGSMDPSTMSALGALGSGLSVSVAAAYSDSGDSNGARSLDNATPP 267
S S++++ + + S+ S+ S + + +S ++++ S S+ + L ++T
Sbjct: 527 SSSIISSPMTSVLSSSSSIPTSSSSDFSSSITTISSGISSSSIPSTFSSVSSILSSSTSS 586
Query: 268 MHYLTPHVEISMADNNETFSPAQNHSDSRVNGEGPSS--------PQSGDSAIASSSLTA 319
+ + IS + + TFS A S S ++ SS P + I+SSS+ +
Sbjct: 587 PS--STSLSISSSSTSSTFSSASTSSPSSISSSISSSSTILSSPTPSTSSLMISSSSIIS 644
Query: 320 GLPANITPSITLIPIKQEPNT 340
G + ++ SI+ IPI +T
Sbjct: 645 GSSSILSSSISTIPISSSLST 665
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 34.7 bits (76), Expect = 0.028
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 103 HKMRHTGVKPYECRV--CQKRFFRKDHLAEHFTT 134
H HTG KP+ C V C + F R D LA+H T
Sbjct: 96 HLRSHTGEKPFICSVPECDRSFTRSDALAKHMRT 129
Score = 31.5 bits (68), Expect = 0.26
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Query: 128 LAEHFTTHTKSLPYHC--PICNRGFQRQIAMRAHFQNEH 164
L H +HT P+ C P C+R F R A+ H + H
Sbjct: 93 LVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMRTVH 131
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 33.5 bits (73), Expect = 0.066
Identities = 25/108 (23%), Positives = 49/108 (45%), Gaps = 1/108 (0%)
Query: 210 SVLAAGIANAAYGEGSMDPSTMSALGALGSGLSVS-VAAAYSDSGDSNGARSLDNATPPM 268
S ++ +++++ S PS+ S+ S LS S + + S S ++ + S +++
Sbjct: 204 STSSSYLSSSSVVSSSSSPSSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTA 263
Query: 269 HYLTPHVEISMADNNETFSPAQNHSDSRVNGEGPSSPQSGDSAIASSS 316
+ I + ++ + SP S + SSP S S I+SSS
Sbjct: 264 SSSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSS 311
Score = 29.1 bits (62), Expect = 1.4
Identities = 23/105 (21%), Positives = 49/105 (46%), Gaps = 3/105 (2%)
Query: 229 STMSALGALGSGLSVSVAAAYSDSGDSNGARSLDNATPPMHYLTPHVEISMADNNETFSP 288
ST S+ + S +S S + + S S + ++ P + S++ ++ + +
Sbjct: 204 STSSSYLSSSSVVSSSSSPSSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTA 263
Query: 289 AQNHSDSRV---NGEGPSSPQSGDSAIASSSLTAGLPANITPSIT 330
+ + S S + + SSP S S I+SSS ++ P + + +I+
Sbjct: 264 SSSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTIS 308
Score = 27.9 bits (59), Expect = 3.3
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 225 SMDPSTMSALGALGSGLSVSVAAAYSDSGDSNGARSLDNATPPMHYLTPHVEISMADNNE 284
S ST S+ + S +S S +++ S + S+ S +++ + + S + ++
Sbjct: 257 SSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTIS-SSSSSSS 315
Query: 285 TFSPAQNHSDSRVNGEGPSSPQSGDSAIASSS 316
+FS + S + SSP S S I+SSS
Sbjct: 316 SFSSTLSSSSMSSSSSFSSSPTSSSSTISSSS 347
Score = 27.1 bits (57), Expect = 5.7
Identities = 19/104 (18%), Positives = 48/104 (46%)
Query: 213 AAGIANAAYGEGSMDPSTMSALGALGSGLSVSVAAAYSDSGDSNGARSLDNATPPMHYLT 272
++ A+++ S+ S+ S+ + S S +++ S S ++ + ++ +++ +
Sbjct: 259 SSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSSSSSSSFS 318
Query: 273 PHVEISMADNNETFSPAQNHSDSRVNGEGPSSPQSGDSAIASSS 316
+ S ++ +FS + S S ++ S S S+ SSS
Sbjct: 319 STLSSSSMSSSSSFSSSPTSSSSTISSSSSSPSSSSFSSTTSSS 362
>SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 463
Score = 31.9 bits (69), Expect = 0.20
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Query: 86 ECDVCNMKFSNGANMRRH-KMRHTGVKPY-ECRVCQKRFFRKDHLAEHFTTHTKSLPYHC 143
+C C FS+ ++H K H+ P E V + F D+LAE S+ + C
Sbjct: 209 DCLFCAASFSSFDTCKKHMKASHSLYIPEREYLVDEPSLF--DYLAEKI-----SIGFTC 261
Query: 144 PICNRGFQRQIAMRAHFQNE 163
CNR F+ A+RAH Q +
Sbjct: 262 LTCNREFKSLEAVRAHMQQK 281
>SPAC16C9.06c |upf1||ATP-dependent RNA helicase
Upf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 925
Score = 29.5 bits (63), Expect = 1.1
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 8/52 (15%)
Query: 422 CTFCSITFPDSTLYFLHKGCHCDSNPWKCNICGEQCCNVYEFNSHLLSKSHQ 473
C +C I P+S L K HC N W CN+ G+ SHL+ H+
Sbjct: 44 CAYCHIKNPNSIL----KCLHC--NKWFCNVRGKS--GASHIISHLVRARHK 87
>SPAC24H6.02c |||TIM23 translocase complex subunit
Tim15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 175
Score = 29.5 bits (63), Expect = 1.1
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Query: 85 FECDVCNMKFSNGANMRRHKMRHTGVKPYECRVCQKRFFRKDHL 128
F C VCN + ++ + + + H G +C C+ R DHL
Sbjct: 80 FTCTVCNTRSNHNFSKQAY---HNGTVLVQCPKCKNRHLMADHL 120
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 29.1 bits (62), Expect = 1.4
Identities = 33/123 (26%), Positives = 44/123 (35%), Gaps = 2/123 (1%)
Query: 210 SVLAAGIANAAYGEGSMDPSTMSALGALGSGLSVSVAAAYSDSGDSNGARSLDNATPPMH 269
SV N E S++ + + S L S + S S+ S +N T
Sbjct: 467 SVTPTSAENYTSSEAFSTSSSLVVIPPVNSSLVTSSTSFTKFSSLSSSQLSTENFTSASS 526
Query: 270 YLTPHVEISMADNNETFSPAQNHSDSRVNGEGP--SSPQSGDSAIASSSLTAGLPANITP 327
L+ S T P N S S SSP S A+S+ T L +ITP
Sbjct: 527 SLSLTNAKSSLSTPSTTIPTSNSSVSLQTSSSLIISSPIISSSLTATSTSTPALTHSITP 586
Query: 328 SIT 330
S T
Sbjct: 587 SNT 589
>SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 855
Score = 29.1 bits (62), Expect = 1.4
Identities = 20/91 (21%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Query: 193 NRHGIDLDNPGPGNNSVSVLAAGIANAAYGEGSMDPSTMSALGALGSGLSVSVAAAYSDS 252
N+ + NP +++ + A+G + S M + + G ++ VA S+S
Sbjct: 443 NQENAESFNPSISSHNSAEWASGETTGHSSNSPLPGSDMFSPQFMRVGTAMGVAPVRSNS 502
Query: 253 GDSNGARSLDNATPPMHYLTPHVEISMADNN 283
++ G ++ + T P PH ++S D N
Sbjct: 503 SNNFG-QNFFHQTSPQFSAVPHRKVSAQDTN 532
>SPBPB7E8.01 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 569
Score = 28.7 bits (61), Expect = 1.9
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Query: 181 APTMKSLRVHFLNRHG--IDLDNPGPGNNSVSVLAAGIANAAYGEGSMDPSTMSALGALG 238
APT K L +H L R +D N N + + ++ A S ST + GA G
Sbjct: 485 APTGKQLALHPLRRETSILDSTNTTSTNATNTTTTTSSSSTASSSASASSSTSATSGAAG 544
Query: 239 SGLSVS 244
SVS
Sbjct: 545 DLFSVS 550
>SPBC21C3.02c |sds3||Sds3-like family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 491
Score = 28.7 bits (61), Expect = 1.9
Identities = 15/51 (29%), Positives = 22/51 (43%)
Query: 269 HYLTPHVEISMADNNETFSPAQNHSDSRVNGEGPSSPQSGDSAIASSSLTA 319
H + P + NN SP S+ R+N S Q DSA+++ A
Sbjct: 12 HEILPKEPFDLPMNNLKSSPKNKDSEKRINNSIAESEQVVDSALSNPETNA 62
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 28.3 bits (60), Expect = 2.5
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 6/46 (13%)
Query: 111 KPYECRVCQKRFFRKDHLAEHFTTHTKSLPYHCPICNRGFQRQIAM 156
KPY C VC KR+ + L H TH+ H + QR++ M
Sbjct: 397 KPYRCEVCSKRYKNLNGLKYH-RTHS-----HLQVSMAQAQREVQM 436
>SPAC2H10.01 |||transcription factor, zf-fungal binuclear cluster
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 480
Score = 28.3 bits (60), Expect = 2.5
Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 13/55 (23%)
Query: 101 RRHKMRHTG--VKPYECRVCQKRFFRKDHLAEHFTTHT------KSLPYHCPICN 147
RR K+R TG + C CQK H HF+T + KS P HCP N
Sbjct: 20 RRRKIRCTGSDIPGQPCLACQKA-----HADCHFSTTSWRACRKKSAPLHCPSTN 69
>SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme
Fub2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 628
Score = 27.9 bits (59), Expect = 3.3
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 315 SSLTAGLPANITPSITLIPIKQEP 338
S+ T GLP I + T IP+KQ+P
Sbjct: 532 SNSTEGLPYQILSNATSIPLKQQP 555
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 27.9 bits (59), Expect = 3.3
Identities = 22/117 (18%), Positives = 54/117 (46%), Gaps = 1/117 (0%)
Query: 216 IANAAYGEGSMDPSTMSALGALGSGLSVSVAAAYSDSGDSNGARSLDNATPPMHYLTPHV 275
I++ + + T S+ S + S +++ S S S+ + +++ +
Sbjct: 127 ISSTSIAPSMIGTRTSSSYFITSSSSTPSSSSSSSSSSPSSSSSKSSSSSKSSSSSSSSS 186
Query: 276 EISMADNNETFSPAQNHSDSRVNGEGPSSPQSGDSAIASSSLTAGLPANITPSITLI 332
+ S + ++ + S + + S S+ + PSS +S +SS +T+ PA+ + S ++
Sbjct: 187 KSSSSSSSSSKSSSSSSSSSK-SSASPSSSKSSSKFSSSSFITSTTPASSSSSGAIV 242
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 27.5 bits (58), Expect = 4.3
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
Query: 2 SSKGETEADSGTVSPNLNTEKNEPVATVSKET-----SKRGTTLKCTTCNDFSTSSVRTL 56
SS T + SGT + L++ NE T ++ T + TT+ TTC+ ++ T+
Sbjct: 533 SSPSPTSSFSGTSA--LSSSSNEETTTTTQVTYTTSPEETTTTMTTTTCSSRPEETISTV 590
Query: 57 ST 58
ST
Sbjct: 591 ST 592
>SPBC106.01 |mph1|SPBC1271.16c, SPBC243.01|dual specificity protein
kinase Mph1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 678
Score = 27.5 bits (58), Expect = 4.3
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 283 NETFSPAQNHSDSRVNGEGPSSPQSGDSAI 312
N+TFS +HSD V G+ SG +A+
Sbjct: 40 NDTFSSKSSHSDGTVTGDTLRRQSSGATAL 69
>SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 948
Score = 27.1 bits (57), Expect = 5.7
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 2 SSKGETEADSGTVSPNLN--TEKNEPVATVSKETSKRGTTLKCTTCNDFSTSSVRTLSTH 59
S K +TE DS +SP+L+ E NE V +S+E ++ + + S S+RT+ T
Sbjct: 235 SIKSDTEHDSVQLSPSLHYFDEFNESV--ISEEGTEAFLVARGPSVGIASRISLRTIPTQ 292
Query: 60 MGQCFPDNNNVAAAQNTDTRPHRKIF 85
CF + AA + +K+F
Sbjct: 293 --SCFSEKLLKAANLCVVQQVKQKVF 316
>SPBC2F12.11c |rep2||transcriptional activator
Rep2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 219
Score = 27.1 bits (57), Expect = 5.7
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 414 AMLPS-SLVCTFCSITFPDSTLYFLHKGCHCDSNPWK 449
A+ P+ +L+C+ C+ TF ST +H+ + P+K
Sbjct: 168 ALRPTPNLICSKCNTTFNHSTALMMHEATCLNQVPFK 204
>SPCC1393.10 |ctr4||copper transporter complex subunit Ctr4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 289
Score = 27.1 bits (57), Expect = 5.7
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 7/106 (6%)
Query: 232 SALGALGSGL-SVSVAAAYSDSG--DSNGARSLDNATPPMHYLTPHVEI-SMADNNETFS 287
+A +LG+ L + + A + G D + L+N PP+ LT + +M +N+T
Sbjct: 6 AAKQSLGNSLIKLGTSMAQNSQGPVDDSSLSQLENLLPPLQILTARAAMAAMNMSNDTSM 65
Query: 288 PAQNHSDSRVNGEGPSSPQSGDSAIA---SSSLTAGLPANITPSIT 330
N ++S G + S S S+S T+ N+T + T
Sbjct: 66 SGMNMTNSTTPMSGMNMTNSTTSMSGMNMSNSTTSMSGMNMTNTTT 111
>SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 478
Score = 27.1 bits (57), Expect = 5.7
Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Query: 49 STSSVRTLSTHMGQCFPDNNNVAAAQNTDTRPHRKIFECDVCNMKFSNGANMRRHKMRHT 108
S S ++ +H + +VA A P+ F CD C+M F + + HK +
Sbjct: 104 SGSELKGEESHNSPGTLNGTSVANASKQPNMPNAT-FRCDKCDMMFVKQSGLTNHKRTYH 162
Query: 109 GVK 111
V+
Sbjct: 163 QVE 165
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 26.2 bits (55), Expect = 9.9
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 288 PAQNHSDSRVNGEGPSSPQSGDSAIASSS 316
P + HS S +G G SS +S S+ S S
Sbjct: 93 PEKAHSSSEASGSGSSSDESDSSSSESES 121
>SPBC359.01 ||SPBPB10D8.08|amino acid permease, unknown
7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 581
Score = 26.2 bits (55), Expect = 9.9
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 231 MSALGALGSGLSVSVAAAYSDSGDSN 256
+S GA+GSGL V +A++D G ++
Sbjct: 85 ISVGGAIGSGLYVGSGSAFADGGPAS 110
>SPCC1902.02 |mug72|SPCC663.16c|ketopantoate reductase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 574
Score = 26.2 bits (55), Expect = 9.9
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 227 DPSTMSALGALGSGLSVSVAAAYSDSGDSNGARSLDNATPPMHY-LTPHVEISMADNNET 285
+P TM+ G++ LS S A SD+ ++ + +A PP + + + NN++
Sbjct: 443 NPLTMNKAGSVSDLLSTSTNMASSDALETASMIGVPSAMPPNSFDMLTLTQRRNRRNNQS 502
Query: 286 FSP 288
SP
Sbjct: 503 SSP 505
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 26.2 bits (55), Expect = 9.9
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Query: 250 SDSGDSNGARSLDNATPPMHYLTPHVEISMADNNETFSPAQNHSDSRVNGEGPSSPQSGD 309
S S S+ S +++P T S + ++ + S + + S S + SS S
Sbjct: 128 SSSSVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSS--SSSSSSSSSSSS 185
Query: 310 SAIASSSLTAGLPANITPSITLIPI 334
S+ +SSS ++ ++ + S + +PI
Sbjct: 186 SSSSSSSSSSSSSSSSSSSSSSVPI 210
>SPAC2G11.15c |tgs1|SPAC521.01c|RNA methyltransferase Tgs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 239
Score = 26.2 bits (55), Expect = 9.9
Identities = 11/37 (29%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Query: 161 QNEHVGQHDLVKTCPLCSYRAPTMKSLRVHFLNRHGI 197
+NE + + +L+K C +C P K+L+ ++ NR+ +
Sbjct: 3 KNEELDEDELLKKCIIC---PPVPKALKKYWNNRYNL 36
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.129 0.395
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,013,373
Number of Sequences: 5004
Number of extensions: 83230
Number of successful extensions: 374
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 285
Number of HSP's gapped (non-prelim): 82
length of query: 473
length of database: 2,362,478
effective HSP length: 75
effective length of query: 398
effective length of database: 1,987,178
effective search space: 790896844
effective search space used: 790896844
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 55 (26.2 bits)
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