BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001139-TA|BGIBMGA001139-PA|IPR007087|Zinc finger,
C2H2-type
(473 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein ... 76 2e-15
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 33 0.013
AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless female-s... 32 0.029
AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless male-spe... 32 0.029
AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific tran... 31 0.068
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr... 31 0.089
AF395080-1|AAK97462.1| 537|Anopheles gambiae zinc finger transc... 29 0.21
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi... 28 0.48
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p... 28 0.63
CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein... 25 3.4
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 25 3.4
AJ515150-1|CAD56157.2| 737|Anopheles gambiae acetylcholinestera... 25 4.4
AJ515149-1|CAD56156.1| 737|Anopheles gambiae acetylcholinestera... 25 4.4
DQ219483-1|ABB29887.1| 961|Anopheles gambiae cryptochrome 2 pro... 25 5.9
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel... 25 5.9
EF426165-1|ABO26408.1| 155|Anopheles gambiae unknown protein. 24 7.8
EF426163-1|ABO26406.1| 155|Anopheles gambiae unknown protein. 24 7.8
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. 24 7.8
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein. 24 7.8
>AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein
protein.
Length = 680
Score = 76.2 bits (179), Expect = 2e-15
Identities = 44/143 (30%), Positives = 63/143 (44%), Gaps = 8/143 (5%)
Query: 59 HMGQCFPDNNNVAAA---QNTDTRPHRKIFECDVCNMKFSNGANMRRHKMRHTGVKPYEC 115
H CF + + ++T RPH K ECD +++ S ++RH HTG KP++C
Sbjct: 187 HCDNCFTTSGELIRHIRYRHTHERPH-KCTECDYASVELSK---LKRHIRTHTGEKPFQC 242
Query: 116 RVCQKRFFRKDHLAEHFTTHTKSLPYHCPICNRGFQRQIAMRAHFQNEHVGQHDLVKTCP 175
C K L H HT PY C +C F + +++AH VG + + C
Sbjct: 243 PHCTYASPDKFKLTRHMRIHTGEKPYSCDVCFARFTQSNSLKAHKMIHQVGNKPVFQ-CK 301
Query: 176 LCSYRAPTMKSLRVHFLNRHGID 198
LC LR+H N H D
Sbjct: 302 LCPTTCGRKTDLRIHVQNLHTAD 324
Score = 66.9 bits (156), Expect = 1e-12
Identities = 48/175 (27%), Positives = 74/175 (42%), Gaps = 25/175 (14%)
Query: 21 EKNEPVA---TVSKETSKR-GTTLKCTTCNDFSTSSVRTLSTHMGQCFPDNNNVAAAQNT 76
E+ EP T K T + G+T C CN ++++ + LS H+ ++
Sbjct: 104 EEQEPAKKTQTRGKRTQQSTGSTYMCNYCN-YTSNKLFLLSRHL------------KTHS 150
Query: 77 DTRPHRKIFECDVCNMKFSNGANMRRHKMRHTGVKPYECRVCQKRFFRKDHLAEHFT-TH 135
+ RPH+ C VC F A+++ H HTG KP+ C+ C F L H H
Sbjct: 151 EDRPHK----CVVCERGFKTLASLQNHVNTHTGTKPHRCKHCDNCFTTSGELIRHIRYRH 206
Query: 136 TKSLPYHCPICNRGFQRQIAMRAHFQNEHVGQHDLVKTCPLCSYRAPTMKSLRVH 190
T P+ C C+ ++ H + H G+ CP C+Y +P L H
Sbjct: 207 THERPHKCTECDYASVELSKLKRHIRT-HTGEKPF--QCPHCTYASPDKFKLTRH 258
Score = 62.1 bits (144), Expect = 3e-11
Identities = 46/166 (27%), Positives = 72/166 (43%), Gaps = 17/166 (10%)
Query: 41 KCTTCNDFS---TSSVRTLSTHMG----QC----FPDNNNVAAAQNTDTRPHRKIFECDV 89
KCT C+ S + R + TH G QC + + ++ K + CDV
Sbjct: 213 KCTECDYASVELSKLKRHIRTHTGEKPFQCPHCTYASPDKFKLTRHMRIHTGEKPYSCDV 272
Query: 90 CNMKFSNGANMRRHKMRH-TGVKP-YECRVCQKRFFRKDHLAEHFTT-HTKSLPYHCPIC 146
C +F+ +++ HKM H G KP ++C++C RK L H HT P C C
Sbjct: 273 CFARFTQSNSLKAHKMIHQVGNKPVFQCKLCPTTCGRKTDLRIHVQNLHTADKPIKCKRC 332
Query: 147 NRGFQRQIAMRAHFQNEHVGQHDLVKTCPLCSYRAPTMKSLRVHFL 192
+ F + + + H + H G+ C C Y + +M+ L H L
Sbjct: 333 DSTFPDRYSYKMHAKT-HEGEK--CYRCEYCPYASISMRHLESHLL 375
Score = 60.1 bits (139), Expect = 1e-10
Identities = 29/112 (25%), Positives = 48/112 (42%), Gaps = 2/112 (1%)
Query: 85 FECDVCNMKFSNGANMRRHKMRHTGVKPYECRVCQKRFFRKDHLAEHFTTHTKSLPYHCP 144
+ C+ CN + + RH H+ +P++C VC++ F L H THT + P+ C
Sbjct: 127 YMCNYCNYTSNKLFLLSRHLKTHSEDRPHKCVVCERGFKTLASLQNHVNTHTGTKPHRCK 186
Query: 145 ICNRGFQRQIAMRAHFQNEHVGQHDLVKTCPLCSYRAPTMKSLRVHFLNRHG 196
C+ F + H + H H+ C C Y + + L+ H G
Sbjct: 187 HCDNCFTTSGELIRHIRYRHT--HERPHKCTECDYASVELSKLKRHIRTHTG 236
Score = 54.0 bits (124), Expect = 8e-09
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 6/101 (5%)
Query: 83 KIFECDVCNMKFSNGANMRRHKMRHTGVKPYECRVCQKRFFRKDHLAEHFTTHTKSLPYH 142
K +C C+ F + + + H H G K Y C C HL H HT PY
Sbjct: 325 KPIKCKRCDSTFPDRYSYKMHAKTHEGEKCYRCEYCPYASISMRHLESHLLLHTDQKPYK 384
Query: 143 CPICNRGFQRQIAMRAH---FQN-EHVGQHDLVKT--CPLC 177
C C + F+++ ++ H + N ++V KT CP C
Sbjct: 385 CDQCAQTFRQKQLLKRHMNYYHNPDYVAPTPKAKTHICPTC 425
Score = 43.6 bits (98), Expect = 1e-05
Identities = 36/158 (22%), Positives = 61/158 (38%), Gaps = 14/158 (8%)
Query: 7 TEADSGTVSPNLNTEKNEPV--ATVSKETSKRGTTLKCTTCNDFSTSSVRTLSTHMGQCF 64
T+++S ++ N+PV + T R T L+ N T+ F
Sbjct: 278 TQSNSLKAHKMIHQVGNKPVFQCKLCPTTCGRKTDLRIHVQN-LHTADKPIKCKRCDSTF 336
Query: 65 PDNNNVAAAQNTDTRPHRKIFECDVCNMKFSNGANMRRHKMRHTGVKPYECRVCQKRFFR 124
PD + + T K + C+ C + ++ H + HT KPY+C C + F +
Sbjct: 337 PDRYSYK--MHAKTHEGEKCYRCEYCPYASISMRHLESHLLLHTDQKPYKCDQCAQTFRQ 394
Query: 125 KDHLAEHFTTH---------TKSLPYHCPICNRGFQRQ 153
K L H + K+ + CP C R F+ +
Sbjct: 395 KQLLKRHMNYYHNPDYVAPTPKAKTHICPTCKRPFRHK 432
Score = 35.1 bits (77), Expect = 0.004
Identities = 16/52 (30%), Positives = 22/52 (42%)
Query: 422 CTFCSITFPDSTLYFLHKGCHCDSNPWKCNICGEQCCNVYEFNSHLLSKSHQ 473
C C TFPD Y +H H ++C C ++ SHLL + Q
Sbjct: 329 CKRCDSTFPDRYSYKMHAKTHEGEKCYRCEYCPYASISMRHLESHLLLHTDQ 380
Score = 28.7 bits (61), Expect = 0.36
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 418 SSLVCTFCSITFPDSTLYFLHKGCHCDSNPWKCNIC 453
S+ +C +C+ T L H H + P KC +C
Sbjct: 125 STYMCNYCNYTSNKLFLLSRHLKTHSEDRPHKCVVC 160
Score = 27.9 bits (59), Expect = 0.63
Identities = 9/32 (28%), Positives = 13/32 (40%)
Query: 422 CTFCSITFPDSTLYFLHKGCHCDSNPWKCNIC 453
C C+ PD H H P+ C++C
Sbjct: 242 CPHCTYASPDKFKLTRHMRIHTGEKPYSCDVC 273
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 33.5 bits (73), Expect = 0.013
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
Query: 108 TGVKP--YECRVCQKRFFRKDHLAEHFTTHTKSLPYHCPICNRGFQRQIAMRAHFQNEH 164
TG P Y C C K + H H H + + CP+C + F R+ M+AH + +H
Sbjct: 892 TGTFPTLYSCVSCHKTVSNRWH---HANIH-RPQSHECPVCGQKFTRRDNMKAHCKVKH 946
Score = 27.9 bits (59), Expect = 0.63
Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Query: 86 ECDVCNMKFSNGANMRRH-KMRH 107
EC VC KF+ NM+ H K++H
Sbjct: 924 ECPVCGQKFTRRDNMKAHCKVKH 946
>AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless
female-specific zinc-fingerC isoform protein.
Length = 593
Score = 32.3 bits (70), Expect = 0.029
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Query: 113 YECRVCQKRFFRKDHLAEHFTTHTKSLPYHCPICNRGFQRQIAMRAHFQNEH 164
+ CR C K + H HF +HT CP C + R +R+H + +H
Sbjct: 527 WRCRSCGKEVTNRWH---HFHSHTPQRSL-CPYCPASYSRIDTLRSHLRIKH 574
Score = 29.5 bits (63), Expect = 0.21
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 10/69 (14%)
Query: 413 AAMLPSSLVCTFCSITFPDSTLYFLH--KGCHCDSNP-------WKCNICGEQCCN-VYE 462
+++LPSSLV + P T Y LH H P W+C CG++ N +
Sbjct: 483 SSILPSSLVSSPDGTDLPHHTHYQLHHQMSYHNMFTPSREPGTAWRCRSCGKEVTNRWHH 542
Query: 463 FNSHLLSKS 471
F+SH +S
Sbjct: 543 FHSHTPQRS 551
Score = 26.2 bits (55), Expect = 1.9
Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Query: 148 RGFQRQIAMRAHFQNEHVGQHDLVKTCPLCSYRAPTMKSLRVHFLNRHGIDLDNP 202
R +++ R H + H Q L CP C + +LR H +H L+ P
Sbjct: 530 RSCGKEVTNRWHHFHSHTPQRSL---CPYCPASYSRIDTLRSHLRIKHADRLNAP 581
>AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless
male-specific zinc-fingerC isoform protein.
Length = 569
Score = 32.3 bits (70), Expect = 0.029
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Query: 113 YECRVCQKRFFRKDHLAEHFTTHTKSLPYHCPICNRGFQRQIAMRAHFQNEH 164
+ CR C K + H HF +HT CP C + R +R+H + +H
Sbjct: 503 WRCRSCGKEVTNRWH---HFHSHTPQRSL-CPYCPASYSRIDTLRSHLRIKH 550
Score = 29.5 bits (63), Expect = 0.21
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 10/69 (14%)
Query: 413 AAMLPSSLVCTFCSITFPDSTLYFLH--KGCHCDSNP-------WKCNICGEQCCN-VYE 462
+++LPSSLV + P T Y LH H P W+C CG++ N +
Sbjct: 459 SSILPSSLVSSPDGTDLPHHTHYQLHHQMSYHNMFTPSREPGTAWRCRSCGKEVTNRWHH 518
Query: 463 FNSHLLSKS 471
F+SH +S
Sbjct: 519 FHSHTPQRS 527
Score = 26.2 bits (55), Expect = 1.9
Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Query: 148 RGFQRQIAMRAHFQNEHVGQHDLVKTCPLCSYRAPTMKSLRVHFLNRHGIDLDNP 202
R +++ R H + H Q L CP C + +LR H +H L+ P
Sbjct: 506 RSCGKEVTNRWHHFHSHTPQRSL---CPYCPASYSRIDTLRSHLRIKHADRLNAP 557
>AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific
transcription factor FRU-MB protein.
Length = 759
Score = 31.1 bits (67), Expect = 0.068
Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Query: 109 GVKPYECRVCQKRFFRKDHLAEHFTTHTKSLPYHCPICNRGFQRQIAMRAHFQNEH 164
G + C++C K H+ H+ H + CP+C + R +R H + +H
Sbjct: 496 GCNLHRCKLCGKVV---THIRNHYHVHFPGR-FECPLCRATYTRSDNLRTHCKFKH 547
Score = 26.6 bits (56), Expect = 1.5
Identities = 36/186 (19%), Positives = 62/186 (33%), Gaps = 15/186 (8%)
Query: 85 FECDVCNMKFSNGANMRRH-KMRHTGVKPYECRVCQKRFFRKDHLAEHFTTHTKSLPYHC 143
FEC +C ++ N+R H K +H P + R + +A ++
Sbjct: 524 FECPLCRATYTRSDNLRTHCKFKHPMFNP-DTRKFENML--SPTMASQAAAAAAAISAAA 580
Query: 144 PICNRGFQRQIAMRAHFQNEHVGQHDLVKTCPLCSYRAPTMKSLRVHFLNRHGIDLDNPG 203
N F+ + A N + + +Y T KS + N
Sbjct: 581 AAANSSFKPDFSTAAAVANSFKSEQFSSAAAAVANYALGTFKS--------DFPPIPNSS 632
Query: 204 PGNNSVSVLAAGIANAAYGEGSMDPSTMSALGALGSGLSVSVAAAYSDSGDSNGARSLDN 263
+ +V AA A+ + G G G++GSG + ++ G +G S
Sbjct: 633 AAAAAAAVAAAVAASVSPGSGGGGGGGGGGGGSVGSG---GIGSSSLGGGGGSGRSSSGG 689
Query: 264 ATPPMH 269
MH
Sbjct: 690 GMIGMH 695
>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
protein.
Length = 1253
Score = 30.7 bits (66), Expect = 0.089
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Query: 202 PGPGNNSVS-VLAAGIANAAYGEGSMDPS-TMSALGALGSGLSVSVAAAYSDSGDSNGAR 259
P PG+ S + + G AN + + S+ LG+G + A D D N
Sbjct: 1158 PSPGSRSYNGQMGGGGANRKRSSATNNGGGRQSSNNGLGAGGRTNFAYQVDDDFDDN--Y 1215
Query: 260 SLDNATPPMHYLTPHVEISMAD 281
S D+A M Y P VE+ MA+
Sbjct: 1216 SDDDAREEMQYRRPTVELEMAE 1237
>AF395080-1|AAK97462.1| 537|Anopheles gambiae zinc finger
transcription factor pannier protein.
Length = 537
Score = 29.5 bits (63), Expect = 0.21
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 4/113 (3%)
Query: 220 AYGEGSMDPSTM--SALGALGSGLSVSVAAAYSDSGDSNGAR-SLDNATPPMHYLTPHVE 276
+YG GS S + G LGS + +A S G G S+ +++ + T +
Sbjct: 295 SYGLGSSLGSAHHGGSAGTLGSLVGKYDLSALSPPGSLGGVPGSIVSSSAHQQHTTAGLN 354
Query: 277 IS-MADNNETFSPAQNHSDSRVNGEGPSSPQSGDSAIASSSLTAGLPANITPS 328
S + + S + HS S VNG G + P G + +++ AG + TPS
Sbjct: 355 SSHIYTTPSSNSLSTQHSHSPVNGYGNNHPTGGSNLPGNNNGGAGGGGSNTPS 407
>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
topoisomerase protein.
Length = 1039
Score = 28.3 bits (60), Expect = 0.48
Identities = 22/100 (22%), Positives = 41/100 (41%), Gaps = 7/100 (7%)
Query: 200 DNPGPGNNSVSVLAAGIANAAYGEGSMDPSTMSALGALGSGLSVSVAAAYSDSGDSNGAR 259
+N G+N+ + + +G +NAA S S L SG + + ++ G+ NG
Sbjct: 103 NNNNNGSNTGATVNSGSSNAAL-------SNSSVLNGSNSGSATTTTTTPTNPGNGNGGS 155
Query: 260 SLDNATPPMHYLTPHVEISMADNNETFSPAQNHSDSRVNG 299
+ +N + HV + +N T + + NG
Sbjct: 156 NNNNNSNSSSSCNNHVSSNTNNNGTTNGGGELTTGGGTNG 195
>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
protein.
Length = 3325
Score = 27.9 bits (59), Expect = 0.63
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 7/89 (7%)
Query: 188 RVHFLNRHGIDLDNPGPGNNSVSVLAAGIANAAYGEGSMDPSTMSALGALGSGLSVSVAA 247
R F NR G+ +N + ++ +A G A G G ST G + G++V +
Sbjct: 3173 RKTFRNRRGMRSNNFSEPSYAIPTVAGGAGLAMVGAGG---STAPGAGGV-PGVAVVPGS 3228
Query: 248 AYSDSGDSNGARSLDNATPPMHYLTPHVE 276
+ S GA S A PP+ P+VE
Sbjct: 3229 GLPAAAASGGAPS---AMPPIVNEPPYVE 3254
>CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein
protein.
Length = 415
Score = 25.4 bits (53), Expect = 3.4
Identities = 13/58 (22%), Positives = 26/58 (44%), Gaps = 5/58 (8%)
Query: 85 FECDVCNMKFSNGANMRRHKMRHTGVK----PYECRVCQKRFF-RKDHLAEHFTTHTK 137
F+C++C+M + ++H+ + +C +C K F R+D+ H K
Sbjct: 349 FQCNLCDMSYRTKLQYQKHEYEVHRISNENFGIKCTICHKLFSQRQDYQLHMRAIHPK 406
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 25.4 bits (53), Expect = 3.4
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 14 VSPNLNTEKNEPVATVSKETSKRGTTLKC 42
+SP +NT + +PV +E LKC
Sbjct: 440 LSPTINTPETDPVPITRQEIINLANRLKC 468
>AJ515150-1|CAD56157.2| 737|Anopheles gambiae acetylcholinesterase
protein.
Length = 737
Score = 25.0 bits (52), Expect = 4.4
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 207 NSVSVLAAGIANAAYGEGSMDPSTMSALGALGSGLSVSVAAAYSDSGDSNGARS 260
N+ + + + +AA G G S S G+L SG+ SV AA + S S+ S
Sbjct: 46 NNGAAIGSHQLSAAAGVGLSSQSAQS--GSLASGVMSSVPAAGASSSSSSSLLS 97
>AJ515149-1|CAD56156.1| 737|Anopheles gambiae acetylcholinesterase
protein.
Length = 737
Score = 25.0 bits (52), Expect = 4.4
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 207 NSVSVLAAGIANAAYGEGSMDPSTMSALGALGSGLSVSVAAAYSDSGDSNGARS 260
N+ + + + +AA G G S S G+L SG+ SV AA + S S+ S
Sbjct: 46 NNGAAIGSHQLSAAAGVGLSSQSAQS--GSLASGVMSSVPAAGASSSSSSSLLS 97
>DQ219483-1|ABB29887.1| 961|Anopheles gambiae cryptochrome 2
protein.
Length = 961
Score = 24.6 bits (51), Expect = 5.9
Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 6/109 (5%)
Query: 228 PSTMSALGALGSGLSVSVAAAYSDSGDSNGARSLDNATPPMHYLTPHVEISMADNNETFS 287
P SALG GSG A D+ +G ++ ++ H + + +++ S
Sbjct: 576 PDPRSALGGNGSGGDRGNAGVPDDTKHGDGTDGSNHLMAGKESISQHQQSQLQHSHQAQS 635
Query: 288 ---PAQNHSDSRVNGEG--PSSPQSGDSAIASSSLTAGLPA-NITPSIT 330
+Q +S+S N E + P + +AI SL+ + A N+T + T
Sbjct: 636 LDQQSQENSNSVANSEQRYGTLPVAEYAAIKPDSLSTLIRAGNLTSAGT 684
>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
cytoskeletal structural protein protein.
Length = 1645
Score = 24.6 bits (51), Expect = 5.9
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 232 SALGALGSGLSVSVAAAYSDSGDSNGARSLDNATPPMHYLTPH 274
S L A+ S + +++A S + SNG+ + M YL PH
Sbjct: 190 SLLAAVTSPVLSRISSASSPNLSSNGSTLSSPSGSRMEYLLPH 232
>EF426165-1|ABO26408.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 24.2 bits (50), Expect = 7.8
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 61 GQCFPDNNNVAAAQNTDTRPHRKIFECDVCNMKFSNGAN 99
G F D + + QN R I +CD+C + NGA+
Sbjct: 97 GCLFNDKSMCSLIQNALPSEIR-IVDCDLCTTELCNGAS 134
>EF426163-1|ABO26406.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 24.2 bits (50), Expect = 7.8
Identities = 8/41 (19%), Positives = 21/41 (51%)
Query: 59 HMGQCFPDNNNVAAAQNTDTRPHRKIFECDVCNMKFSNGAN 99
++ C ++ ++ + + +I +CD+C + NGA+
Sbjct: 94 YVRDCLFNDKSMCSLMQSALPSEIRIVDCDLCTTELCNGAS 134
>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
Length = 3398
Score = 24.2 bits (50), Expect = 7.8
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Query: 404 GVITSTYGDAAMLPSSLVCTFCSIT-FPDSTLYFLHK 439
GV TS++ M PSSL+ +F SIT L+F+ K
Sbjct: 2850 GVATSSW--ILMNPSSLISSFVSITSVAAKALFFVAK 2884
>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
Length = 1132
Score = 24.2 bits (50), Expect = 7.8
Identities = 12/52 (23%), Positives = 21/52 (40%)
Query: 197 IDLDNPGPGNNSVSVLAAGIANAAYGEGSMDPSTMSALGALGSGLSVSVAAA 248
+ +D P P ++S + + G G S +S + S S S A+
Sbjct: 31 LSMDTPSPSSSSAAAAVVSVGEFTLGPGRTYASALSPSSSSASPSSPSSVAS 82
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.315 0.129 0.395
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 466,928
Number of Sequences: 2123
Number of extensions: 19332
Number of successful extensions: 133
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 92
Number of HSP's gapped (non-prelim): 39
length of query: 473
length of database: 516,269
effective HSP length: 66
effective length of query: 407
effective length of database: 376,151
effective search space: 153093457
effective search space used: 153093457
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 50 (24.2 bits)
- SilkBase 1999-2023 -