Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001139-TA|BGIBMGA001139-PA|IPR007087|Zinc finger,
C2H2-type
(473 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein ... 46 5e-05
At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein ... 44 2e-04
At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein ... 42 9e-04
At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein ... 38 0.011
At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein ... 37 0.033
At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein ... 36 0.058
At1g13400.1 68414.m01562 zinc finger (C2H2 type) family protein ... 35 0.13
At5g03510.1 68418.m00307 zinc finger (C2H2 type) family protein ... 34 0.18
At3g49930.1 68416.m05460 zinc finger (C2H2 type) family protein ... 34 0.18
At1g60200.1 68414.m06781 splicing factor PWI domain-containing p... 34 0.23
At1g49900.1 68414.m05596 zinc finger (C2H2 type) family protein ... 33 0.31
At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5) ... 33 0.54
At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2) ... 32 0.72
At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4) ... 32 0.72
At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein ... 32 0.72
At5g40310.1 68418.m04890 exonuclease family protein contains exo... 32 0.95
At2g48100.2 68415.m06021 exonuclease family protein contains Pfa... 32 0.95
At2g48100.1 68415.m06020 exonuclease family protein contains Pfa... 32 0.95
At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein ... 32 0.95
At1g55460.1 68414.m06343 Kin17 DNA-binding protein-related conta... 32 0.95
At5g04390.1 68418.m00431 zinc finger (C2H2 type) family protein ... 31 1.3
At1g20130.1 68414.m02518 family II extracellular lipase, putativ... 31 1.3
At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein ... 31 1.7
At5g35980.1 68418.m04333 protein kinase family protein contains ... 31 1.7
At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein ... 31 1.7
At3g10470.1 68416.m01255 zinc finger (C2H2 type) family protein ... 31 2.2
At5g14140.1 68418.m01654 zinc finger (C2H2 type) family protein ... 30 2.9
At4g12240.1 68417.m01941 zinc finger (C2H2 type) family protein ... 30 2.9
At3g54580.1 68416.m06039 proline-rich extensin-like family prote... 30 2.9
At3g47620.1 68416.m05184 TCP family transcription factor, putati... 30 2.9
At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein ... 30 2.9
At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein ... 30 2.9
At4g28590.1 68417.m04089 expressed protein 30 3.8
At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein ... 30 3.8
At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein ... 30 3.8
At2g28200.1 68415.m03424 zinc finger (C2H2 type) family protein ... 30 3.8
At1g27730.1 68414.m03389 zinc finger (C2H2 type) family protein ... 30 3.8
At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein ... 30 3.8
At1g09920.1 68414.m01116 TRAF-type zinc finger-related contains ... 30 3.8
At5g61470.1 68418.m07713 zinc finger (C2H2 type) family protein ... 29 5.1
At5g53620.2 68418.m06662 expressed protein 29 5.1
At5g53620.1 68418.m06661 expressed protein 29 5.1
At4g15890.1 68417.m02415 expressed protein 29 5.1
At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein ... 29 5.1
At3g13460.2 68416.m01694 expressed protein contains Pfam profile... 29 5.1
At3g13460.1 68416.m01693 expressed protein contains Pfam profile... 29 5.1
At2g46590.1 68415.m05811 Dof zinc finger protein DAG2 / Dof affe... 29 5.1
At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein ... 29 5.1
At1g77770.2 68414.m09056 expressed protein 29 5.1
At1g77770.1 68414.m09055 expressed protein 29 5.1
At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein ... 29 5.1
At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein ... 29 5.1
At5g60470.1 68418.m07584 zinc finger (C2H2 type) family protein ... 29 6.7
At5g40710.1 68418.m04941 zinc finger (C2H2 type) family protein ... 29 6.7
At2g41835.1 68415.m05170 zinc finger (C2H2 type, AN1-like) famil... 29 6.7
At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein ... 29 6.7
At5g56250.2 68418.m07020 expressed protein 29 8.8
At5g56250.1 68418.m07019 expressed protein 29 8.8
At5g42640.1 68418.m05191 zinc finger (C2H2 type) family protein ... 29 8.8
At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein ... 29 8.8
At3g28790.1 68416.m03593 expressed protein 29 8.8
At3g19580.1 68416.m02483 zinc finger (C2H2 type) protein 2 (AZF2... 29 8.8
At3g13700.1 68416.m01731 RNA-binding protein, putative similar t... 29 8.8
At1g02790.1 68414.m00235 exopolygalacturonase / galacturan 1,4-a... 29 8.8
>At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 412
Score = 46.0 bits (104), Expect = 5e-05
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 5/82 (6%)
Query: 87 CDVCNMKFSNGANMRRHKMRHTGVKPYECRV--CQKRFFRKDHLAEHFTTHTKSLPYHCP 144
C C +F A++++H H+ + + C V C + RKDHL H TH L + CP
Sbjct: 68 CQECGAEFKKPAHLKQHMQSHSLERSFTCYVDDCAASYRRKDHLNRHLLTHKGKL-FKCP 126
Query: 145 --ICNRGFQRQIAMRAHFQNEH 164
C F Q + H + H
Sbjct: 127 KENCKSEFSVQGNVGRHVKKYH 148
>At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 387
Score = 44.0 bits (99), Expect = 2e-04
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Query: 85 FECDV--CNMKFSNGANMRRHKMRHTGVKPYECRV--CQKRFFRKDHLAEHFTTHTKSLP 140
+ CD C KF + + ++RH + HTG + Y C C K F +L H TH++
Sbjct: 108 YVCDQEGCGKKFLDSSKLKRHYLIHTGERNYICTYEGCGKAFSLDFNLRSHMKTHSQENY 167
Query: 141 YHCPI--CNRGFQRQIAMRAHFQNEH 164
+ CP C + + + ++ H H
Sbjct: 168 HICPYSGCVKRYAHEYKLKNHVAAYH 193
>At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domians PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1327
Score = 41.9 bits (94), Expect = 9e-04
Identities = 38/159 (23%), Positives = 65/159 (40%), Gaps = 18/159 (11%)
Query: 1 MSSKGETEADSGTVSPNLNT--EKNEPVATVSKETSKRGTTLKCTTCNDFSTSSVRTLST 58
+ S+G+ +A T + T E+ +P+A K+T K C+ V T +T
Sbjct: 1162 LRSRGKRKATCETSLKHTETSDEEKKPIAKRLKKTPK--------ACSGSRQQEVPT-TT 1212
Query: 59 HMGQCFPDNNNVAAAQNTDTRPHRKIFEC--DVCNMKFSNGANMRRHKMRHTGVKPYEC- 115
H +C+ + + + H++ C + C KF + H+ H +P+EC
Sbjct: 1213 HPNRCYLEGCKMTFESKAKLQTHKRN-RCTHEGCGKKFRAHKYLVLHQRVHKDERPFECS 1271
Query: 116 -RVCQKRFFRKDHLAEHFTTHTKSLPYHCPI--CNRGFQ 151
+ C F + EH HT PY C + C F+
Sbjct: 1272 WKGCSMTFKWQWARTEHLRLHTGERPYICKVDGCGLSFR 1310
Score = 32.3 bits (70), Expect = 0.72
Identities = 26/98 (26%), Positives = 39/98 (39%), Gaps = 10/98 (10%)
Query: 76 TDTRPHRKIFECDVCNMKFSNGANMRRHKMRHTGVKPYECRVCQKRFFRKDHLAEHFTTH 135
T T P+R E C M F + A ++ HK + C K+F +L H H
Sbjct: 1210 TTTHPNRCYLEG--CKMTFESKAKLQTHKRNRCTHEG-----CGKKFRAHKYLVLHQRVH 1262
Query: 136 TKSLPYHCPI--CNRGFQRQIAMRAHFQNEHVGQHDLV 171
P+ C C+ F+ Q A H + H G+ +
Sbjct: 1263 KDERPFECSWKGCSMTFKWQWARTEHLR-LHTGERPYI 1299
>At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 373
Score = 38.3 bits (85), Expect = 0.011
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 64 FPDNNNVAAAQNTDTRPH-RKIFECDVCNMK-FSNGANMRRHKMRHTGVKPYECRVCQKR 121
F +V A+N R H K++ C C++K FS +++R H+ +H G + C C +
Sbjct: 284 FQPLKSVICAKNHYKRSHCPKMYMCRRCSVKHFSVLSDLRTHE-KHCGDIKWVCS-CGTK 341
Query: 122 FFRKDHLAEHFTTHTKSLPYH 142
F RKD L H + +P H
Sbjct: 342 FSRKDKLMSHVSLFLGHVPAH 362
>At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domains PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1354
Score = 36.7 bits (81), Expect = 0.033
Identities = 26/97 (26%), Positives = 39/97 (40%), Gaps = 10/97 (10%)
Query: 85 FECDV--CNMKFSNGANMRRHKMRHTGVKPYECRVCQKRFFRKDHLAEHFTTHTKSLPYH 142
++C++ C M FS+ + HK +K C K FF +L +H H+ P
Sbjct: 1237 YQCNMEGCTMSFSSEKQLMLHKRNICPIKG-----CGKNFFSHKYLVQHQRVHSDDRPLK 1291
Query: 143 CPI--CNRGFQRQIAMRAHFQNEHVGQHDLVKTCPLC 177
CP C F+ + H + H G V P C
Sbjct: 1292 CPWKGCKMTFKWAWSRTEHIR-VHTGARPYVCAEPDC 1327
>At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 446
Score = 35.9 bits (79), Expect = 0.058
Identities = 33/145 (22%), Positives = 59/145 (40%), Gaps = 12/145 (8%)
Query: 46 NDFSTSSVRTLSTHMGQCFPDNNNVAAAQNTDTRPHRKIFECDVCNMKFSNGANMRRHKM 105
N S++S + G PD +A + N+ +R F C+VCN F N++ H+
Sbjct: 31 NPTSSNSAKRKRNLPGNPDPDAEVIALSPNSLMTTNR--FICEVCNKGFKRDQNLQLHRR 88
Query: 106 RHTGVKPYECRVCQKRFFRKDHLAEHFTTHTKSLPYHCPICNRGFQRQIAMRAHFQNEHV 165
H + R +++ +K ++ K+ +H P R ++ HF +H
Sbjct: 89 GHNLPWKLKQRTNKEQVKKKVYICPE-----KTCVHHDPA--RALGDLTGIKKHFSRKH- 140
Query: 166 GQHDLVKTCPLCSYRAPTMKSLRVH 190
G+ C CS + M + H
Sbjct: 141 GEKKW--KCDKCSKKYAVMSDWKAH 163
>At1g13400.1 68414.m01562 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 240
Score = 34.7 bits (76), Expect = 0.13
Identities = 24/70 (34%), Positives = 26/70 (37%), Gaps = 9/70 (12%)
Query: 66 DNNNVAAAQNTDTRPHRKIFECDVCNMKFSNGANMRRHKMRHTGVKPYECRVCQKRFFRK 125
D NN N P R IF F G R K G K YECR C +FF+
Sbjct: 45 DENNTLDLNNLPDDPSRDIFPF------FEEGGF--REKQTKDG-KEYECRFCSLKFFKS 95
Query: 126 DHLAEHFTTH 135
L H H
Sbjct: 96 QALGGHMNRH 105
>At5g03510.1 68418.m00307 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 292
Score = 34.3 bits (75), Expect = 0.18
Identities = 16/66 (24%), Positives = 29/66 (43%)
Query: 45 CNDFSTSSVRTLSTHMGQCFPDNNNVAAAQNTDTRPHRKIFECDVCNMKFSNGANMRRHK 104
C + T+S T+ T ++ + ++ K EC +C +FS+G + H
Sbjct: 152 CVEKKTASASTVETVEAGAVGSFLSLQVTSSDGSKKPEKTHECSICKAEFSSGQALGGHM 211
Query: 105 MRHTGV 110
RH G+
Sbjct: 212 RRHRGL 217
>At3g49930.1 68416.m05460 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 215
Score = 34.3 bits (75), Expect = 0.18
Identities = 23/80 (28%), Positives = 32/80 (40%), Gaps = 4/80 (5%)
Query: 111 KPYECRVCQKRFFRKDHLAEHFTTHTKSLPYHCPICNRGFQRQIAMRAHFQNEHVGQHDL 170
K Y+C VC K F L H T+H K P + N + + N VGQ
Sbjct: 92 KDYKCSVCGKSFPSYQALGGHKTSHRK--PVSVDVNNS--NGTVTNNGNISNGLVGQSGK 147
Query: 171 VKTCPLCSYRAPTMKSLRVH 190
C +C P+ ++L H
Sbjct: 148 THNCSICFKSFPSGQALGGH 167
>At1g60200.1 68414.m06781 splicing factor PWI domain-containing
protein / RNA recognition motif (RRM)-containing protein
contains Pfam profiles PF01480: PWI domain, PF00076: RNA
recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Length = 899
Score = 33.9 bits (74), Expect = 0.23
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 9/110 (8%)
Query: 169 DLVKTCPLCSYRAPTMKSLRVHFLNRHGIDLDNPGPGNNSVSVLAAGIANAAYGEGSMDP 228
+ V+T P+ + T++++ H D + G GN S+++ + G + P
Sbjct: 592 ETVQTSPIENDHKATLQTVGESANEHHAADFEENGSGNESMAI------DNNSGSEAHAP 645
Query: 229 STMSALGALGSGLSVSVAAAYSDSGDSNGARSLDNATP--PMHYLTPHVE 276
S G +GSG SV + + + D + AR P P+ Y T E
Sbjct: 646 SKKLGFGLVGSGKRTSVPSVFYEE-DEDEARKAKKMKPLVPIDYSTEEQE 694
>At1g49900.1 68414.m05596 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 917
Score = 33.5 bits (73), Expect = 0.31
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 9/75 (12%)
Query: 41 KCTTCNDFSTSSVRTLSTHMGQ-----CFPDNNNVAAAQNTDTR---PHRKIFECDVCNM 92
KC+ C TS + L H +N A + T ++ P KI +CD+C++
Sbjct: 194 KCSICEKVFTS-YQALGGHKASHSIKAAQLENAGADAGEKTRSKMLSPSGKIHKCDICHV 252
Query: 93 KFSNGANMRRHKMRH 107
F G + HK RH
Sbjct: 253 LFPTGQALGGHKRRH 267
Score = 31.1 bits (67), Expect = 1.7
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 80 PHRKIFECDVCNMKFSNGANMRRHKMRH 107
P KI +C +C+ +FS G ++ HK H
Sbjct: 793 PSGKIHKCSICHREFSTGQSLGGHKRLH 820
Score = 28.7 bits (61), Expect = 8.8
Identities = 34/154 (22%), Positives = 55/154 (35%), Gaps = 19/154 (12%)
Query: 13 TVSPNLNTEKNEPVATVSKETSKRGTTLKCTTCNDFSTSSVRTLSTHMGQCFPDNNNVAA 72
+V+PN ++ V + S SK T C T + + +T + Q
Sbjct: 689 SVAPNQQRFGDDEVPSSSSSLSKDETAALCPTPHSQTQPQSQTQLQKVTQ---------- 738
Query: 73 AQNTDTRPHRKIFECDVCNMKFSNGANMRRHKMRHTGVKPYECRVCQKRFFRKDHLAEHF 132
T P ++C+VC + + + HK H P E +K R LA
Sbjct: 739 -PQTQMLPKSDSYQCNVCGRELPSYQALGGHKASHRTKPPVENATGEK--MRPKKLAPSG 795
Query: 133 TTHTKSLPYHCPICNRGFQRQIAMRAHFQNEHVG 166
H C IC+R F ++ H + + G
Sbjct: 796 KIH------KCSICHREFSTGQSLGGHKRLHYEG 823
>At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5)
identical to WIP5 protein [Arabidopsis thaliana]
gi|18376498|emb|CAC86167; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 32.7 bits (71), Expect = 0.54
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 6/69 (8%)
Query: 100 MRRHKMRHTGVKPYECRVCQKRFFRKDHLAEHFTTHTKSLPYHCPICNRGFQRQIAMRAH 159
++ H R G KP+ CR+C K F K H K ++C C F+ + +++ H
Sbjct: 249 LQTHYKRKHGSKPFACRMCGKAFAVKGDWRTHEKNCGKL--WYCS-CGSDFKHKRSLKDH 305
Query: 160 ---FQNEHV 165
F N HV
Sbjct: 306 VKAFGNGHV 314
>At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2)
identical to WIP2 protein [Arabidopsis thaliana]
gi|18027012|gb|AAL55722; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 383
Score = 32.3 bits (70), Expect = 0.72
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Query: 100 MRRHKMRHTGVKPYECRVCQKRFFRKDHLAEHFTTHTKSLPYHCPICNRGFQRQIAMRAH 159
++ H R G+KP+ CR C K F + H K ++C IC F+ + +++ H
Sbjct: 288 LQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKL--WYC-ICGSDFKHKRSLKDH 344
Query: 160 FQ 161
+
Sbjct: 345 IK 346
>At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4)
identical to WIP4 protein [Arabidopsis thaliana]
gi|18376500|emb|CAC86168; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 412
Score = 32.3 bits (70), Expect = 0.72
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 6/69 (8%)
Query: 100 MRRHKMRHTGVKPYECRVCQKRFFRKDHLAEHFTTHTKSLPYHCPICNRGFQRQIAMRAH 159
++ H R GV+P+ CR C K F K H K ++C C F+ + +++ H
Sbjct: 327 LQTHYKRKHGVRPFACRRCGKAFAVKGDWRTHEKNCGKL--WYCS-CGSDFKHKRSLKDH 383
Query: 160 ---FQNEHV 165
F N HV
Sbjct: 384 VKAFGNGHV 392
>At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein
(ZAT11) contains Pfam domain, PF00096: Zinc finger, C2H2
type
Length = 178
Score = 32.3 bits (70), Expect = 0.72
Identities = 27/97 (27%), Positives = 40/97 (41%), Gaps = 16/97 (16%)
Query: 100 MRRHKMRHTGVKPYECRVCQKRFFRKDHLAEHFTTHTK-SLPYHCPICNRGFQRQIAMRA 158
+ +H HT +EC+ C KRF L H +H K L Q+ +
Sbjct: 35 LNQHTESHTS-NQFECKTCNKRFSSFQALGGHRASHKKPKLTVE--------QKDV---K 82
Query: 159 HFQNEHVGQHDLVKTCPLCSYRAPTMKSLRVHFLNRH 195
H N++ G H C +CS T ++L H + RH
Sbjct: 83 HLSNDYKGNH--FHKCSICSQSFGTGQALGGH-MRRH 116
Score = 31.9 bits (69), Expect = 0.95
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 14/90 (15%)
Query: 74 QNTDTRPHRKIFECDVCNMKFSNGANMRRHKMRHTGVKPYECRVCQK--RFFRKDHLAEH 131
Q+T++ + FEC CN +FS+ + H+ H KP + V QK + D+ H
Sbjct: 37 QHTESHTSNQ-FECKTCNKRFSSFQALGGHRASHK--KP-KLTVEQKDVKHLSNDYKGNH 92
Query: 132 FTTHTKSLPYHCPICNRGFQRQIAMRAHFQ 161
F + C IC++ F A+ H +
Sbjct: 93 F--------HKCSICSQSFGTGQALGGHMR 114
>At5g40310.1 68418.m04890 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 348
Score = 31.9 bits (69), Expect = 0.95
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 114 ECRVCQKRFFRKDHLAEH--FTTHTKSLPYHCPICNRGFQRQIAMRAH 159
+C C ++F +K+HL EH + H+ P C ICN+ + ++R H
Sbjct: 7 KCGGCYRQFNKKEHLVEHMRISYHSVHEP-TCGICNKHCRSFDSLREH 53
>At2g48100.2 68415.m06021 exonuclease family protein contains Pfam
domain PF00929: exonuclease
Length = 344
Score = 31.9 bits (69), Expect = 0.95
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 104 KMRHTGVKPYECRVCQKRFFRKDHLAEHFTTHTKSLPY-HCPICNRGFQRQIAMRAH 159
K R V+ + C C K F R++HL EH SL C +C + + ++R H
Sbjct: 9 KRRKISVR-HRCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREH 64
>At2g48100.1 68415.m06020 exonuclease family protein contains Pfam
domain PF00929: exonuclease
Length = 344
Score = 31.9 bits (69), Expect = 0.95
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 104 KMRHTGVKPYECRVCQKRFFRKDHLAEHFTTHTKSLPY-HCPICNRGFQRQIAMRAH 159
K R V+ + C C K F R++HL EH SL C +C + + ++R H
Sbjct: 9 KRRKISVR-HRCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREH 64
>At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 439
Score = 31.9 bits (69), Expect = 0.95
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 5/91 (5%)
Query: 17 NLNTEKNEPVATVSKETSKRGTTLKCTTCNDFSTSSVRTLSTHMGQCFPDNNNVAAAQNT 76
N NT V++ S + + TT N TS+ + G PD V+ + T
Sbjct: 4 NKNTNTCCVVSSSSSDPFLSSSENGVTTTN---TSTQKRKRRPAGTPDPDAEVVSLSPRT 60
Query: 77 DTRPHRKIFECDVCNMKFSNGANMRRHKMRH 107
R I C++CN F N++ H+ RH
Sbjct: 61 LLESDRYI--CEICNQGFQRDQNLQMHRRRH 89
>At1g55460.1 68414.m06343 Kin17 DNA-binding protein-related contains
similarity to zinc finger protein rts2 GB:U16133
GI:563244 from [Saccharomyces cerevisiae]
Length = 411
Score = 31.9 bits (69), Expect = 0.95
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 448 WKCNICGEQCCNVYEFNSHLLSKSHQ 473
W C +C +QC + F H +S+SHQ
Sbjct: 26 WYCQMCQKQCRDENGFKCHCMSESHQ 51
>At5g04390.1 68418.m00431 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 362
Score = 31.5 bits (68), Expect = 1.3
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 67 NNNVAAAQNTDTRPHRKIFECDVCNMKFSNGANMRRHKMRHTG 109
NNN + K+ EC +C +F++G + H RH G
Sbjct: 211 NNNSRSLVVYGKASKNKVHECGICGAEFTSGQALGGHMRRHRG 253
>At1g20130.1 68414.m02518 family II extracellular lipase, putative
contains Pfam profile PF00657: GDSL-like
Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566)
Length = 1006
Score = 31.5 bits (68), Expect = 1.3
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 66 DNNNVAAAQNTDTRPHRKIFECDVCNMKFSNGANMRRHKMRHTGVKP 112
+NNN+ + P+ K F V +FSNG + + + GVKP
Sbjct: 486 NNNNLTTEMKCNFSPYGKDFPLGVATGRFSNGKVVSDYISEYLGVKP 532
>At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 500
Score = 31.1 bits (67), Expect = 1.7
Identities = 35/167 (20%), Positives = 63/167 (37%), Gaps = 14/167 (8%)
Query: 25 PVATVSKETSKRGTTLKCTTCNDFSTSSVRTLSTHM-GQCFPDNNNVAAAQNTDTRPHRK 83
PV + T ++ T + + SV ++ G PD +A + T +R
Sbjct: 2 PVDLDNSSTVSGDASVSSTGNQNLTPKSVGKKKRNLPGMPDPDAEVIALSPKTLMATNR- 60
Query: 84 IFECDVCNMKFSNGANMRRHKMRHTGVKPYECRVCQKRFFRKDHLAEHFTTHTKSLPYHC 143
F C++CN F N++ H+ H P++ R + RK + + +H
Sbjct: 61 -FVCEICNKGFQRDQNLQLHRRGHN--LPWKLRQRSTKEVRK----KVYVCPVSGCVHHD 113
Query: 144 PICNRGFQRQIAMRAHFQNEHVGQHDLVKTCPLCSYRAPTMKSLRVH 190
P +R ++ HF +H G+ C CS + + H
Sbjct: 114 P--SRALGDLTGIKKHFCRKH-GEKKW--KCEKCSKKYAVQSDWKAH 155
>At5g35980.1 68418.m04333 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 956
Score = 31.1 bits (67), Expect = 1.7
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Query: 223 EGSMDPSTMSALGALGSGLSVSVAAAYSDSGDSNGARSLDNATPPMHYLTPHVEISMADN 282
E S D S+++ + G L + A++YS +SN + S N T Y P+ S
Sbjct: 787 EDSADESSLANAFSRGMQLGSTDASSYSRRFNSNASTSSSNPTTQRRY-APNQAFSQV-- 843
Query: 283 NETFSPAQNHSDSRVNGEGPSS 304
ET SP N +R P S
Sbjct: 844 -ETGSPPSNDPHARFGQHIPGS 864
>At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 503
Score = 31.1 bits (67), Expect = 1.7
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 49 STSSVRTLSTHMGQCFPDNNNVAAAQNTDTRPHRKIFECDVCNMKFSNGANMRRHKMRH 107
++SS + G PD + +A + T +R F C++CN F N++ H+ H
Sbjct: 48 NSSSAKKKRNQPGTPDPDADVIALSPTTLMATNR--FVCEICNKGFQRDQNLQLHRRGH 104
>At3g10470.1 68416.m01255 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 398
Score = 30.7 bits (66), Expect = 2.2
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 81 HRKIFECDVCNMKFSNGANMRRHKMRHTG 109
+ K+ EC +C +F++G + H RH G
Sbjct: 257 NNKVHECGICGAEFTSGQALGGHMRRHRG 285
>At5g14140.1 68418.m01654 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 427
Score = 30.3 bits (65), Expect = 2.9
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Query: 126 DHLAEHFTTHTKSLPYHCPICNRGFQRQIAMRAHFQNEHVGQHDLVKTCPLCSYRAPTMK 185
+HL + T+ + CPI G ++ HF++ + +H +C +CS PT +
Sbjct: 131 NHLHKFVEIETRRIS--CPIV--GCPERLKSLDHFEDHYNARH--TASCSVCSRVYPTSR 184
Query: 186 SLRVHFLNRH 195
L +H H
Sbjct: 185 LLSIHISEAH 194
>At4g12240.1 68417.m01941 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 364
Score = 30.3 bits (65), Expect = 2.9
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 111 KPYECRVCQKRFFRKDHLAEHF 132
+PY C VC +RF+ + L HF
Sbjct: 115 EPYFCGVCDRRFYTNEKLINHF 136
>At3g54580.1 68416.m06039 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 951
Score = 30.3 bits (65), Expect = 2.9
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 226 MDPSTMSALGALGSGLSVSVAAAYSDSGDSNGARSLDNATPPMHYLTPHVEISMADNNET 285
M PST + ALG + ++ AAY DS+ + P + Y TP + + T
Sbjct: 1 MGPST-HLICALGVVIMATMVAAYDPYTDSSPPPLYSSPLPKIEYKTPPLPYIDSSPPPT 59
Query: 286 FSPA 289
+SPA
Sbjct: 60 YSPA 63
>At3g47620.1 68416.m05184 TCP family transcription factor, putative
auxin-induced basic helix-loop-helix transcription
factor - Gossypium hirsutum, EMBL:AF165924
Length = 489
Score = 30.3 bits (65), Expect = 2.9
Identities = 23/100 (23%), Positives = 40/100 (40%), Gaps = 2/100 (2%)
Query: 203 GPGNNSVSVLAAGIANAAYGEGSMDPS-TMSALGALGSGLSVSVAAAYSDSGDSNGARSL 261
G G N+ A+ G G +P T ++ + L S + S+G +
Sbjct: 341 GGGGNNNQTGGLMTASIGTGGGGGEPVWTFPSINTAAAALYRSGVSGVPSGAVSSGLHFM 400
Query: 262 DNATPPMHYLTPHVEISMADNNETFSPAQNHSDSRVNGEG 301
N PM +LT +++ N+E + N+ R +G G
Sbjct: 401 -NFAAPMAFLTGQQQLATTSNHEINEDSNNNEGGRSDGGG 439
>At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 516
Score = 30.3 bits (65), Expect = 2.9
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 65 PDNNNVAAAQNTDTRPHRKIFECDVCNMKFSNGANMRRHKMRH 107
PD VA + T +R F CDVCN F N++ H+ H
Sbjct: 65 PDAEVVALSPKTLMATNR--FICDVCNKGFQREQNLQLHRRGH 105
Score = 29.9 bits (64), Expect = 3.8
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Query: 100 MRRHKMRHTGVKPYECRVCQKRF-FRKDHLAEHFTTHTKSLPYHCPICNRGFQRQIAMRA 158
+++H R G K ++C C KR+ + D A T TK Y C C F R+ +
Sbjct: 146 IKKHYYRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTKE--YRCD-CGTIFSRRDSYIT 202
Query: 159 H 159
H
Sbjct: 203 H 203
>At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 324
Score = 30.3 bits (65), Expect = 2.9
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 5/58 (8%)
Query: 111 KPYECRV--CQKRFFRKDHLAEHFTTHTKSLPYHCP--ICNRGFQRQIAMRAHFQNEH 164
+ + C V C + RKDHL H TH L + CP C F Q + H + H
Sbjct: 4 RSFTCYVDDCAASYRRKDHLNRHLLTHKGKL-FKCPKENCKSEFSVQGNVGRHVKKYH 60
>At4g28590.1 68417.m04089 expressed protein
Length = 331
Score = 29.9 bits (64), Expect = 3.8
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Query: 3 SKGETEA---DSGTVSPNLNTEKNEPVATVSKETSKRGTTLKCTTCNDFSTSSV-RTLST 58
SK +T + + V+P TE NE T SKRG + D+ SS+ RT ST
Sbjct: 60 SKNQTRSRRKNKEAVTPIAETENNEKFPTKVPRKSKRGRRSEADAVEDYVRSSLERTFST 119
>At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 452
Score = 29.9 bits (64), Expect = 3.8
Identities = 29/126 (23%), Positives = 52/126 (41%), Gaps = 13/126 (10%)
Query: 65 PDNNNVAAAQNTDTRPHRKIFECDVCNMKFSNGANMRRHKMRHTGVKPYECRVCQKRFFR 124
P++ +A + T +R F C++CN F N++ H+ H P++ R QK
Sbjct: 45 PESEVIALSPKTLLATNR--FVCEICNKGFQRDQNLQLHRRGHN--LPWKLR--QKS--N 96
Query: 125 KDHLAEHFTTHTKSLPYHCPICNRGFQRQIAMRAHFQNEHVGQHDLVKTCPLCSYRAPTM 184
K+ + + S +H P +R ++ HF +H G+ C CS +
Sbjct: 97 KEVKKKVYVCPEVSCVHHDP--SRALGDLTGIKKHFCRKH-GEKKW--KCDKCSKKYAVQ 151
Query: 185 KSLRVH 190
+ H
Sbjct: 152 SDWKAH 157
>At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 314
Score = 29.9 bits (64), Expect = 3.8
Identities = 19/81 (23%), Positives = 32/81 (39%), Gaps = 6/81 (7%)
Query: 32 ETSKRGTTLKCTTCNDFSTSSVRTLSTHMGQCFPDNNNVAAAQNTDTR-----PHRKIFE 86
++SK KC TC S + L H + + + +T +K+ E
Sbjct: 186 KSSKSRGRFKCETCGKVF-KSYQALGGHRASHKKNKACMTKTEQVETEYVLGVKEKKVHE 244
Query: 87 CDVCNMKFSNGANMRRHKMRH 107
C +C F++G + HK H
Sbjct: 245 CPICFRVFTSGQALGGHKRSH 265
>At2g28200.1 68415.m03424 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 284
Score = 29.9 bits (64), Expect = 3.8
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
Query: 83 KIFECDVCNMKFSN----GANMRRHKMRHTGVKP 112
K+ EC +C +F++ G +MRRH+ T + P
Sbjct: 186 KVHECSICGSEFTSGQALGGHMRRHRTAVTTISP 219
>At1g27730.1 68414.m03389 zinc finger (C2H2 type) family protein
(ZAT10) / salt-tolerance zinc finger protein (STZ)
identical to salt-tolerance zinc finger protein
GB:CAA64820 GI:1565227 from [Arabidopsis thaliana];
contains Pfam domain, PF00096: Zinc finger, C2H2 type;
identical to cDNA zinc finger protein STZ/ZAT10
(STZ/ZAT10) GI:9965730
Length = 227
Score = 29.9 bits (64), Expect = 3.8
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 419 SLVCTFCSITFPDSTLYFLHKGCHCDSN 446
S VCT C+ +FP HK CH + N
Sbjct: 135 SHVCTICNKSFPSGQALGGHKRCHYEGN 162
>At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 362
Score = 29.9 bits (64), Expect = 3.8
Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 65 PDNNNVAAAQNTDTRPHRKIFECDVCNMKFSNGANMRRHKMRH 107
PD V+ + T R + C++CN F N++ H+ RH
Sbjct: 21 PDAEVVSLSPRTLLESDRYV--CEICNQGFQRDQNLQMHRRRH 61
>At1g09920.1 68414.m01116 TRAF-type zinc finger-related contains
Pfam PF02176: TRAF-type zinc finger; similar to TNF
receptor associated factor 4 (GI:7274404) [Mus musculus]
(GI:7274404); similar to Cysteine rich motif Associated
to Ring and Traf domains protein (mCART1)(GI:1041446)
[Mus musculus]
Length = 192
Score = 29.9 bits (64), Expect = 3.8
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Query: 419 SLVCTFCSITFPDSTLYFLHKGCHCDSNPWKCNICGE 455
++VC C P + LH+ HC N KC ICG+
Sbjct: 9 TIVCNHCDRDIPSLNID-LHR-VHCARNLEKCKICGD 43
>At5g61470.1 68418.m07713 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 304
Score = 29.5 bits (63), Expect = 5.1
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 82 RKIFECDVCNMKFSNGANMRRHKMRH 107
R+ +EC +CN F++G + HK H
Sbjct: 271 RRQYECQICNRMFASGQALGGHKKIH 296
>At5g53620.2 68418.m06662 expressed protein
Length = 682
Score = 29.5 bits (63), Expect = 5.1
Identities = 25/102 (24%), Positives = 41/102 (40%), Gaps = 8/102 (7%)
Query: 222 GEGSMDPSTMSALGALGSGLSVSVAAAYSDSGDSNGARSLDNATPPMHYLTPHVEISMAD 281
G G + S ++ G + SV+ A S +GD NG+ +N + D
Sbjct: 447 GYGDIQTSQVAQYGTTTTPSSVNEQAVESGNGDYNGSNQSENN-------FQDISSQFRD 499
Query: 282 NNETFSPAQNHSDSRVNGEGPSSPQSGDSAIASSSL-TAGLP 322
S +QN +NG+ SG +I +L ++G P
Sbjct: 500 ALRLDSHSQNQKPEELNGQVSPDEHSGAKSIVPETLVSSGKP 541
>At5g53620.1 68418.m06661 expressed protein
Length = 682
Score = 29.5 bits (63), Expect = 5.1
Identities = 25/102 (24%), Positives = 41/102 (40%), Gaps = 8/102 (7%)
Query: 222 GEGSMDPSTMSALGALGSGLSVSVAAAYSDSGDSNGARSLDNATPPMHYLTPHVEISMAD 281
G G + S ++ G + SV+ A S +GD NG+ +N + D
Sbjct: 447 GYGDIQTSQVAQYGTTTTPSSVNEQAVESGNGDYNGSNQSENN-------FQDISSQFRD 499
Query: 282 NNETFSPAQNHSDSRVNGEGPSSPQSGDSAIASSSL-TAGLP 322
S +QN +NG+ SG +I +L ++G P
Sbjct: 500 ALRLDSHSQNQKPEELNGQVSPDEHSGAKSIVPETLVSSGKP 541
>At4g15890.1 68417.m02415 expressed protein
Length = 1314
Score = 29.5 bits (63), Expect = 5.1
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 429 FPDSTLYFLHKGCHCDSNPWKCNICG 454
FP+ L L + C+ + +PW ICG
Sbjct: 564 FPEGVLVLLRELCNSEVSPWVTKICG 589
>At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein
similar to finger protein pcp1 GB:S48856 from [Solanum
tuberosum] contains Pfam domain, PF00096: Zinc finger,
C2H2 type
Length = 513
Score = 29.5 bits (63), Expect = 5.1
Identities = 28/127 (22%), Positives = 48/127 (37%), Gaps = 12/127 (9%)
Query: 65 PDNNNVAAAQNTDTRPHRKIFECDVCNMKFSNGANMRRHKMRHTGVKPYECRV-CQKRFF 123
PD + A + T F C++CN F N++ H+ H P++ + K
Sbjct: 79 PDPESEVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHN--LPWKLKQRSNKEVI 136
Query: 124 RKDHLAEHFTTHTKSLPYHCPICNRGFQRQIAMRAHFQNEHVGQHDLVKTCPLCSYRAPT 183
RK + + S +H P +R ++ HF +H G+ C CS +
Sbjct: 137 RK----KVYVCPEASCVHHDP--SRALGDLTGIKKHFCRKH-GEKKW--KCDKCSKKYAV 187
Query: 184 MKSLRVH 190
+ H
Sbjct: 188 QSDCKAH 194
>At3g13460.2 68416.m01694 expressed protein contains Pfam profile
PF04146: YT521-B-like family
Length = 664
Score = 29.5 bits (63), Expect = 5.1
Identities = 36/132 (27%), Positives = 54/132 (40%), Gaps = 10/132 (7%)
Query: 191 FLNRHGIDLDNPGPGNNSVSVLAAGIANAAYGEGSMDPSTMSALGALGSG-LSVSVAAAY 249
+ N G+D+++ G N V G AAY P+T A G G L + Y
Sbjct: 95 YTNPEGVDMNSGIYGENGTVVYPQGYGYAAY---PYSPATSPAPQLGGEGQLYGAQQYQY 151
Query: 250 SDSGDSNGARSLDNATPPMHYLTPH----VEISMADNNETFSPAQNHSDSRVNGEGPSSP 305
+ ++G + ATP L+ + V+ AD+N S A S NG P P
Sbjct: 152 PNYFPNSGPYASSVATPTQPDLSANKPAGVKTLPADSNNVASAAGITKGS--NGSAPVKP 209
Query: 306 QSGDSAIASSSL 317
+ + SS+L
Sbjct: 210 TNQATLNTSSNL 221
>At3g13460.1 68416.m01693 expressed protein contains Pfam profile
PF04146: YT521-B-like family
Length = 667
Score = 29.5 bits (63), Expect = 5.1
Identities = 36/132 (27%), Positives = 54/132 (40%), Gaps = 10/132 (7%)
Query: 191 FLNRHGIDLDNPGPGNNSVSVLAAGIANAAYGEGSMDPSTMSALGALGSG-LSVSVAAAY 249
+ N G+D+++ G N V G AAY P+T A G G L + Y
Sbjct: 98 YTNPEGVDMNSGIYGENGTVVYPQGYGYAAY---PYSPATSPAPQLGGEGQLYGAQQYQY 154
Query: 250 SDSGDSNGARSLDNATPPMHYLTPH----VEISMADNNETFSPAQNHSDSRVNGEGPSSP 305
+ ++G + ATP L+ + V+ AD+N S A S NG P P
Sbjct: 155 PNYFPNSGPYASSVATPTQPDLSANKPAGVKTLPADSNNVASAAGITKGS--NGSAPVKP 212
Query: 306 QSGDSAIASSSL 317
+ + SS+L
Sbjct: 213 TNQATLNTSSNL 224
>At2g46590.1 68415.m05811 Dof zinc finger protein DAG2 / Dof
affecting germination 2 (DAG2) identical to SP|Q9ZPY0
DOF zinc finger protein DAG2 (Dof affecting germination
2) {Arabidopsis thaliana}
Length = 357
Score = 29.5 bits (63), Expect = 5.1
Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 1/74 (1%)
Query: 18 LNTEKNEPVATVSKETSKRGTTLKCTTCNDFSTSSVRTLSTHMGQCFPDNNNVAAAQNTD 77
+N + E + + T + TT +++ V T + +NNN A
Sbjct: 2 MNVKPMEQIMIPNNNTHQPNTTSNARPNTILTSNGVSTAGATVSGVSNNNNNTAVVAERK 61
Query: 78 TRPHRKIFECDVCN 91
RP K+ C CN
Sbjct: 62 ARPQEKL-NCPRCN 74
>At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 602
Score = 29.5 bits (63), Expect = 5.1
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Query: 100 MRRHKMRHTGVKPYECRVCQKRF-FRKDHLAEHFTTHTKSLPYHCPICNRGFQRQIAMRA 158
+++H R G K ++C C KR+ + D A T TK Y C C F R+ +
Sbjct: 144 IKKHYYRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTKE--YRCD-CGTLFSRRDSFIT 200
Query: 159 H 159
H
Sbjct: 201 H 201
>At1g77770.2 68414.m09056 expressed protein
Length = 264
Score = 29.5 bits (63), Expect = 5.1
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
Query: 135 HTKSLPYHCPICNRGFQRQIAMRAHFQNEHVGQHDLVKTCPLCSYRA---PTMKSLRVHF 191
H PY C +R R + NE+ GQ +L+ CPLC + +K R+HF
Sbjct: 50 HKGCRPYMCATSSRFANCLDQYRKSYGNENSGQPELL--CPLCRGQVKGWTVVKDARMHF 107
>At1g77770.1 68414.m09055 expressed protein
Length = 265
Score = 29.5 bits (63), Expect = 5.1
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
Query: 135 HTKSLPYHCPICNRGFQRQIAMRAHFQNEHVGQHDLVKTCPLCSYRA---PTMKSLRVHF 191
H PY C +R R + NE+ GQ +L+ CPLC + +K R+HF
Sbjct: 50 HKGCRPYMCATSSRFANCLDQYRKSYGNENSGQPELL--CPLCRGQVKGWTVVKDARMHF 107
>At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 419
Score = 29.5 bits (63), Expect = 5.1
Identities = 21/106 (19%), Positives = 42/106 (39%), Gaps = 9/106 (8%)
Query: 85 FECDVCNMKFSNGANMRRHKMRHTGVKPYECRVCQKRFFRKDHLAEHFTTHTKSLPYHCP 144
+ C++CN F N++ H+ RH P++ KR ++ + + +H P
Sbjct: 70 YVCEICNQGFQRDQNLQMHRRRHK--VPWK---LLKRETNEEVRKRVYVCPEPTCLHHNP 124
Query: 145 ICNRGFQRQIAMRAHFQNEHVGQHDLVKTCPLCSYRAPTMKSLRVH 190
C+ + ++ HF+ +H + C CS + H
Sbjct: 125 -CH-ALGDLVGIKKHFRRKHSNHKQWI--CERCSKGYAVQSDYKAH 166
>At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 29.5 bits (63), Expect = 5.1
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Query: 51 SSVRTLSTHMGQCFPDNNNVAAAQNTDTRPHRKIFECDVCNMKFSNGANMRRHKMRH 107
SS++ G P+ +A + T +R F C+VCN F N++ HK H
Sbjct: 60 SSLKRKRNQPGNPDPEAEVMALSPKTLMATNR--FICEVCNKGFQRDQNLQLHKRGH 114
Score = 28.7 bits (61), Expect = 8.8
Identities = 30/128 (23%), Positives = 54/128 (42%), Gaps = 22/128 (17%)
Query: 91 NMKFSNGANMRRHKMRHTGVKPYECRVCQKRFFRKDHLAEHFTTHTKSLP----YHCPIC 146
N ++G+N+ +H V + + + D AE K+L + C +C
Sbjct: 38 NRTETSGSNINQHHQEQCFVPQSSLKRKRNQPGNPDPEAEVMALSPKTLMATNRFICEVC 97
Query: 147 NRGFQR----QIAMRAH---FQNEHVGQHDLVK----TCPL--CSYRAPT-----MKSLR 188
N+GFQR Q+ R H ++ + D+V+ CP C + P+ + ++
Sbjct: 98 NKGFQRDQNLQLHKRGHNLPWKLKQRSNKDVVRKKVYVCPEPGCVHHHPSRALGDLTGIK 157
Query: 189 VHFLNRHG 196
HF +HG
Sbjct: 158 KHFFRKHG 165
>At5g60470.1 68418.m07584 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 392
Score = 29.1 bits (62), Expect = 6.7
Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 12/107 (11%)
Query: 85 FECDVCNMKFSNGANMRRHKMRHTGVKPYECRVCQKRFFRKDHLAEH-FTTHTKSLPYHC 143
F C++CN F N++ HK H P++ + QK K+ + + + KS +H
Sbjct: 6 FFCEICNKGFQREQNLQLHKRGHN--LPWKLK--QKT--NKNQVKKKVYICPEKSCVHHD 59
Query: 144 PICNRGFQRQIAMRAHFQNEHVGQHDLVKTCPLCSYRAPTMKSLRVH 190
P R ++ HF +H G+ C CS + + + H
Sbjct: 60 PA--RALGDLTGIKKHFSRKH-GEKKW--KCDKCSKKYAVISDWKAH 101
>At5g40710.1 68418.m04941 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 272
Score = 29.1 bits (62), Expect = 6.7
Identities = 11/37 (29%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 103 HKMRHTGVKPYECRVCQKRFFRKDHLAEHFTTHTKSL 139
HK+R + + + C C+K F+ + +L +HF + +L
Sbjct: 98 HKLR-SDINEWRCGFCKKAFYEEKYLDKHFDSRHYNL 133
>At2g41835.1 68415.m05170 zinc finger (C2H2 type, AN1-like) family
protein contains Pfam domain, PF00096: Zinc finger, C2H2
type; contains Pfam domain, PF01428: AN1-like Zinc
finger
Length = 279
Score = 29.1 bits (62), Expect = 6.7
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 9/61 (14%)
Query: 115 CRVCQKRFFRKDHLAEHFT-THTKSLPYH--------CPICNRGFQRQIAMRAHFQNEHV 165
C C +F L EH TH ++ + CP C+RGF+ + + H + +H
Sbjct: 215 CPQCGAKFSSVTSLVEHVEKTHERNKKQNHGNVTVDVCPRCSRGFRDPVDLVNHIERDHR 274
Query: 166 G 166
G
Sbjct: 275 G 275
>At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein
similar to zinc finger protein ID1 GB:AAC18941
GI:3170601 from [Zea mays] contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 467
Score = 29.1 bits (62), Expect = 6.7
Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 13/126 (10%)
Query: 65 PDNNNVAAAQNTDTRPHRKIFECDVCNMKFSNGANMRRHKMRHTGVKPYECRVCQKRFFR 124
PD +A + T +R F C+VCN F N++ H+ H P++ + QK
Sbjct: 64 PDAEVIALSPKTIMATNR--FLCEVCNKGFQREQNLQLHRRGHN--LPWKLK--QKS--N 115
Query: 125 KDHLAEHFTTHTKSLPYHCPICNRGFQRQIAMRAHFQNEHVGQHDLVKTCPLCSYRAPTM 184
K+ + + S +H P R ++ H+ +H G+ C CS R
Sbjct: 116 KEVRRKVYLCPEPSCVHHDPA--RALGDLTGIKKHYYRKH-GEKKW--KCDKCSKRYAVQ 170
Query: 185 KSLRVH 190
+ H
Sbjct: 171 SDWKAH 176
Score = 29.1 bits (62), Expect = 6.7
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Query: 100 MRRHKMRHTGVKPYECRVCQKRF-FRKDHLAEHFTTHTKSLPYHCPICNRGFQRQIAMRA 158
+++H R G K ++C C KR+ + D A T TK Y C C F R+ +
Sbjct: 145 IKKHYYRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTKE--YRCD-CGTIFSRRDSYIT 201
Query: 159 H 159
H
Sbjct: 202 H 202
>At5g56250.2 68418.m07020 expressed protein
Length = 811
Score = 28.7 bits (61), Expect = 8.8
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Query: 42 CTTCNDFSTSSVRTLSTHMGQCFPDNNNVAAAQNTDTRPHR 82
C C FS++S TL+ H+ QC +V + Q +P+R
Sbjct: 178 CPICKTFSSASNTTLNAHIDQCL----SVDSGQQPIRKPNR 214
>At5g56250.1 68418.m07019 expressed protein
Length = 811
Score = 28.7 bits (61), Expect = 8.8
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Query: 42 CTTCNDFSTSSVRTLSTHMGQCFPDNNNVAAAQNTDTRPHR 82
C C FS++S TL+ H+ QC +V + Q +P+R
Sbjct: 178 CPICKTFSSASNTTLNAHIDQCL----SVDSGQQPIRKPNR 214
>At5g42640.1 68418.m05191 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 300
Score = 28.7 bits (61), Expect = 8.8
Identities = 13/39 (33%), Positives = 17/39 (43%)
Query: 131 HFTTHTKSLPYHCPICNRGFQRQIAMRAHFQNEHVGQHD 169
H +TK PY CP CN F AH + + + D
Sbjct: 233 HSLPYTKYGPYTCPRCNGVFDTSQKFAAHMLSHYNNETD 271
>At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein
similar to potato PCP1 zinc finger protein, GenBank
accession number X82328 contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 402
Score = 28.7 bits (61), Expect = 8.8
Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 65 PDNNNVAAAQNTDTRPHRKIFECDVCNMKFSNGANMRRHKMRH 107
PD +A + T +R F C++CN F N++ H+ H
Sbjct: 64 PDAEVIALSPKTLLATNR--FVCEICNKGFQRDQNLQLHRRGH 104
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 28.7 bits (61), Expect = 8.8
Identities = 26/103 (25%), Positives = 43/103 (41%), Gaps = 4/103 (3%)
Query: 240 GLSVSVAAAYSDSGDSNGARSLDNA----TPPMHYLTPHVEISMADNNETFSPAQNHSDS 295
GL V V A+ S S+G+ S DN T + S A + ET + ++ + S
Sbjct: 184 GLDVDVNASIGSSSGSDGSSSSDNESSSNTKSQGTSSKSGSESTAGSIETNTGSKTEAGS 243
Query: 296 RVNGEGPSSPQSGDSAIASSSLTAGLPANITPSITLIPIKQEP 338
+ + + SG S+ + T G + +PS + P P
Sbjct: 244 KSSSSAKTKEVSGGSSGNTYKDTTGSSSGASPSGSPTPTPSTP 286
>At3g19580.1 68416.m02483 zinc finger (C2H2 type) protein 2 (AZF2)
identical to Cys2/His2-type zinc finger protein 2
[Arabidopsis thaliana] gi|6009885|dbj|BAA85107
Length = 273
Score = 28.7 bits (61), Expect = 8.8
Identities = 24/112 (21%), Positives = 39/112 (34%), Gaps = 1/112 (0%)
Query: 112 PYECRVCQKRFFRKDHLAEHFTTHTKSLPYHCPICNRGFQRQIAMRAHFQNEHVGQHDLV 171
PY+C VC+K F L H +H P + + +
Sbjct: 105 PYKCNVCEKAFPSYQALGGHKASHRIKPPTVISTTADDSTAPTISIVAGEKHPIAASGKI 164
Query: 172 KTCPLCSYRAPTMKSLRVHFLNRHGIDLDNPGPGNNSVSVLAAGIANAAYGE 223
C +C PT ++L H + +L G G S S+ +G ++ E
Sbjct: 165 HECSICHKVFPTGQALGGHKRCHYEGNLGG-GGGGGSKSISHSGSVSSTVSE 215
>At3g13700.1 68416.m01731 RNA-binding protein, putative similar to
mec-8 [Caenorhabditis elegans] GI:1370048; contains Pfam
profile:PF00076 rrm:RNA recognition motif
Length = 296
Score = 28.7 bits (61), Expect = 8.8
Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 6/102 (5%)
Query: 238 GSGLSVSVAAAYSDSGDSNGARSLDNATPPMHYLTPHVEISMADNNETFSPAQNHSDSR- 296
GSG V + + S +S + + P P S +N+ T S A + DS+
Sbjct: 143 GSGPYVVIDNRNKEISKSQDDQSDEGDSDPDEVQEPGNSDSPKENDTTKSEADSEPDSKA 202
Query: 297 --VNGEGPSSPQSGDSAIASSSLTAGLPANITPSITLIPIKQ 336
NG + + G A A S+L AN+ P+ T +KQ
Sbjct: 203 PSANGHLEKASEGGSGARACSTL---FIANLGPNCTEDELKQ 241
>At1g02790.1 68414.m00235 exopolygalacturonase / galacturan
1,4-alpha-galacturonidase (PGA3) / pectinase identical
to SP|P49062 Exopolygalacturonase clone GBGE184
precursor (EC 3.2.1.67) (ExoPG) (Galacturan
1,4-alpha-galacturonidase) {Arabidopsis thaliana}
Length = 422
Score = 28.7 bits (61), Expect = 8.8
Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Query: 193 NRHGIDLDNPGPGNNSVSVLAAGIANAAYGEGSMDPSTMSALGALGSGLSVSVAAAYSDS 252
N GI L N + S +A G + G GS + + + G GLSV Y +
Sbjct: 218 NTDGIHLSNADNVSILDSTIATGDDCVSVGRGSNNVTVERVICGPGHGLSVGSLGKYKNE 277
Query: 253 GDSNGARSLDNAT 265
D +G ++N T
Sbjct: 278 EDVSGIH-VNNCT 289
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.315 0.129 0.395
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,563,352
Number of Sequences: 28952
Number of extensions: 441065
Number of successful extensions: 1809
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 1682
Number of HSP's gapped (non-prelim): 153
length of query: 473
length of database: 12,070,560
effective HSP length: 84
effective length of query: 389
effective length of database: 9,638,592
effective search space: 3749412288
effective search space used: 3749412288
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 61 (28.7 bits)
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