GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001138-TA|BGIBMGA001138-
PA|IPR005135|Endonuclease/exonuclease/phosphatase
         (404 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    24   6.4  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   6.4  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 24.2 bits (50), Expect = 6.4
 Identities = 13/37 (35%), Positives = 19/37 (51%)

Query: 137  DDMYLAHRVLQAYSTAEFVKLTSSPADVSILAGDLNT 173
            D M   H   +A+S++E  K     A +  L+G LNT
Sbjct: 1105 DTMLANHLHREAFSSSELQKAKDRLAKLQELSGGLNT 1141


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.2 bits (50), Expect = 6.4
 Identities = 7/23 (30%), Positives = 14/23 (60%)

Query: 221  PKQVKAYPEGKRIDHILFHTNHS 243
            P+ +++ P GK++    FHT  +
Sbjct: 1137 PRYIQSQPAGKQLSMFFFHTKET 1159


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.320    0.137    0.421 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 428,855
Number of Sequences: 2123
Number of extensions: 18338
Number of successful extensions: 21
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 19
Number of HSP's gapped (non-prelim): 2
length of query: 404
length of database: 516,269
effective HSP length: 66
effective length of query: 338
effective length of database: 376,151
effective search space: 127139038
effective search space used: 127139038
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 49 (23.8 bits)