Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001138-TA|BGIBMGA001138-
PA|IPR005135|Endonuclease/exonuclease/phosphatase
(404 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g17430.1 68416.m02226 phosphate translocator-related low simi... 32 0.59
At1g48230.1 68414.m05384 phosphate translocator-related low simi... 32 0.59
At1g31500.2 68414.m03858 endonuclease/exonuclease/phosphatase fa... 32 0.59
At1g31500.1 68414.m03857 endonuclease/exonuclease/phosphatase fa... 32 0.59
At1g53550.1 68414.m06076 F-box family protein similar to F-box f... 32 0.78
At2g21920.1 68415.m02604 hypothetical protein 31 1.8
At2g32650.2 68415.m03989 expressed protein contains Pfam PF05899... 30 2.4
At2g32650.1 68415.m03988 expressed protein contains Pfam PF05899... 30 2.4
At2g32180.1 68415.m03933 expressed protein 30 2.4
At1g31500.3 68414.m03859 endonuclease/exonuclease/phosphatase fa... 30 3.2
At4g34260.1 68417.m04869 expressed protein 29 4.2
At5g01400.1 68418.m00053 expressed protein contains low similari... 29 5.5
At5g19610.1 68418.m02334 sec7 domain-containing protein similar ... 29 7.3
At1g30960.1 68414.m03791 GTP-binding protein (ERG) identical to ... 28 9.7
At1g14940.1 68414.m01785 major latex protein-related / MLP-relat... 28 9.7
>At3g17430.1 68416.m02226 phosphate translocator-related low
similarity to phosphoenolpyruvate/phosphate translocator
precursor [Mesembryanthemum crystallinum] GI:9295275,
SP|P52178 Triose phosphate/phosphate translocator,
non-green plastid, chloroplast precursor (CTPT)
{Brassica oleracea}
Length = 375
Score = 32.3 bits (70), Expect = 0.59
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 59 VLPYSYYFYSGVLGSGLCVFSKWVIQDVFFHQWPLNGYIHKIHHG 103
VL Y Y +L SG+ +++KWV+ +F+ +PL + IH G
Sbjct: 10 VLTYIYLLIYIILSSGVILYNKWVLSPKYFN-FPLPITLTMIHMG 53
>At1g48230.1 68414.m05384 phosphate translocator-related low
similarity to phosphoenolpyruvate/phosphate translocator
precursor [Mesembryanthemum crystallinum] GI:9295275,
SP|P52178 Triose phosphate/phosphate translocator,
non-green plastid, chloroplast precursor (CTPT)
{Brassica oleracea}
Length = 367
Score = 32.3 bits (70), Expect = 0.59
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 59 VLPYSYYFYSGVLGSGLCVFSKWVIQDVFFHQWPLNGYIHKIHHG 103
VL Y Y +L SG+ +++KWV+ +F+ +PL + IH G
Sbjct: 10 VLTYIYLLIYIILSSGVILYNKWVLSPKYFN-FPLPITLTMIHMG 53
>At1g31500.2 68414.m03858 endonuclease/exonuclease/phosphatase
family protein low similarity to SP|P31384
Glucose-repressible alcohol dehydrogenase
transcriptional effector (Carbon catabolite repressor
protein 4) {Saccharomyces cerevisiae}; contains Pfam
profile PF03372: Endonuclease/Exonuclease/phosphatase
family
Length = 383
Score = 32.3 bits (70), Expect = 0.59
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 120 ERLINVYCTHLHAEYHEDDMYLAHRVLQAYSTAEFVKLTSSPADVS---ILAGDLNTAPG 176
+ ++ V THL+ + D+ LA A+F L S + + +LAGD N+ PG
Sbjct: 221 QHIVIVANTHLYWDPELADVKLAQAKYLLSRLAQFKTLISDEFECTPSLLLAGDFNSIPG 280
Query: 177 DLSYKII 183
D+ Y +
Sbjct: 281 DMVYSYL 287
>At1g31500.1 68414.m03857 endonuclease/exonuclease/phosphatase
family protein low similarity to SP|P31384
Glucose-repressible alcohol dehydrogenase
transcriptional effector (Carbon catabolite repressor
protein 4) {Saccharomyces cerevisiae}; contains Pfam
profile PF03372: Endonuclease/Exonuclease/phosphatase
family
Length = 388
Score = 32.3 bits (70), Expect = 0.59
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 120 ERLINVYCTHLHAEYHEDDMYLAHRVLQAYSTAEFVKLTSSPADVS---ILAGDLNTAPG 176
+ ++ V THL+ + D+ LA A+F L S + + +LAGD N+ PG
Sbjct: 226 QHIVIVANTHLYWDPELADVKLAQAKYLLSRLAQFKTLISDEFECTPSLLLAGDFNSIPG 285
Query: 177 DLSYKII 183
D+ Y +
Sbjct: 286 DMVYSYL 292
>At1g53550.1 68414.m06076 F-box family protein similar to F-box
family protein TIGR_Ath1:At3g23960
Length = 408
Score = 31.9 bits (69), Expect = 0.78
Identities = 17/68 (25%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 34 EHNIVCLQEVWSEKDYLYLKENLKNV--LPYSYYFYSGVLGSGLC---VFSKWVIQDVFF 88
++ IVC + + + + +++ + L +S Y G LG+ +C +F WV+++
Sbjct: 254 KYTIVCFDVMTEKFSFTSIDKDMTIMTNLSFSLIDYKGKLGACICDHTLFELWVLENAEE 313
Query: 89 HQWPLNGY 96
H+W N Y
Sbjct: 314 HKWSKNIY 321
>At2g21920.1 68415.m02604 hypothetical protein
Length = 278
Score = 30.7 bits (66), Expect = 1.8
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 72 GSGLCVFSKWVIQDVFFHQWPLNGYI 97
G+G C F W+++D H+W Y+
Sbjct: 42 GNGDCSFYMWILEDAAKHEWSKKAYV 67
>At2g32650.2 68415.m03989 expressed protein contains Pfam PF05899:
Protein of unknown function (DUF861)
Length = 139
Score = 30.3 bits (65), Expect = 2.4
Identities = 15/61 (24%), Positives = 26/61 (42%)
Query: 44 WSEKDYLYLKENLKNVLPYSYYFYSGVLGSGLCVFSKWVIQDVFFHQWPLNGYIHKIHHG 103
W +Y+++ V+P Y L L + KW+ D+FF+ + Y K +
Sbjct: 79 WQVDQLVYIEQGEVRVVPEGSKRYMQFLAGDLVRYPKWLEADLFFNAPYIERYCFKAYGD 138
Query: 104 D 104
D
Sbjct: 139 D 139
>At2g32650.1 68415.m03988 expressed protein contains Pfam PF05899:
Protein of unknown function (DUF861)
Length = 139
Score = 30.3 bits (65), Expect = 2.4
Identities = 15/61 (24%), Positives = 26/61 (42%)
Query: 44 WSEKDYLYLKENLKNVLPYSYYFYSGVLGSGLCVFSKWVIQDVFFHQWPLNGYIHKIHHG 103
W +Y+++ V+P Y L L + KW+ D+FF+ + Y K +
Sbjct: 79 WQVDQLVYIEQGEVRVVPEGSKRYMQFLAGDLVRYPKWLEADLFFNAPYIERYCFKAYGD 138
Query: 104 D 104
D
Sbjct: 139 D 139
>At2g32180.1 68415.m03933 expressed protein
Length = 139
Score = 30.3 bits (65), Expect = 2.4
Identities = 15/61 (24%), Positives = 26/61 (42%)
Query: 44 WSEKDYLYLKENLKNVLPYSYYFYSGVLGSGLCVFSKWVIQDVFFHQWPLNGYIHKIHHG 103
W +Y+++ V+P Y L L + KW+ D+FF+ + Y K +
Sbjct: 79 WQVDQLVYIEQGEVRVVPEGSKRYMQFLAGDLVRYPKWLEADLFFNAPYIERYCFKAYGD 138
Query: 104 D 104
D
Sbjct: 139 D 139
>At1g31500.3 68414.m03859 endonuclease/exonuclease/phosphatase
family protein low similarity to SP|P31384
Glucose-repressible alcohol dehydrogenase
transcriptional effector (Carbon catabolite repressor
protein 4) {Saccharomyces cerevisiae}; contains Pfam
profile PF03372: Endonuclease/Exonuclease/phosphatase
family
Length = 283
Score = 29.9 bits (64), Expect = 3.2
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 120 ERLINVYCTHLHAEYHEDDMYLAHRVLQAYSTAEFVKLTSSPADVS---ILAGDLNTAPG 176
+ ++ V THL+ + D+ LA A+F L S + + +LAGD N+ PG
Sbjct: 221 QHIVIVANTHLYWDPELADVKLAQAKYLLSRLAQFKTLISDEFECTPSLLLAGDFNSIPG 280
Query: 177 DL 178
D+
Sbjct: 281 DM 282
>At4g34260.1 68417.m04869 expressed protein
Length = 843
Score = 29.5 bits (63), Expect = 4.2
Identities = 13/25 (52%), Positives = 18/25 (72%)
Query: 148 AYSTAEFVKLTSSPADVSILAGDLN 172
A +T+E VKL+ P+DV + GDLN
Sbjct: 124 AEATSEAVKLSGQPSDVYQIVGDLN 148
>At5g01400.1 68418.m00053 expressed protein contains low similarity
to symplekin SP:Q92797 from [Homo sapiens]
Length = 1467
Score = 29.1 bits (62), Expect = 5.5
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 107 GGKGVGLCRIKFGERLINVYCTH--LHAEYHEDDMYLAHRVLQ 147
G GV LC +KF E LI +Y H + A+++ + H VL+
Sbjct: 154 GNSGVKLCAMKFVEALILLYTPHEGIEADFNISILRGGHPVLK 196
>At5g19610.1 68418.m02334 sec7 domain-containing protein similar to
SP|Q42510 Pattern formation protein EMB30 (GNOM)
{Arabidopsis thaliana}; contains Pfam profile PF01369:
Sec7 domain
Length = 1375
Score = 28.7 bits (61), Expect = 7.3
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Query: 247 RVVNFGNPLPDRVPEQQFSYSDHNAVSLELHLKPCEQKLNQRQESVDSAFQETITQAIKV 306
R +N GN LP + F NA +L H P E N+ E ++ + TQ +
Sbjct: 653 RAINAGNDLPKEYLSELFQSIATNAFALSTHSGPVEMNPNRWIELMN---RTKTTQPFSL 709
Query: 307 CR 308
C+
Sbjct: 710 CQ 711
>At1g30960.1 68414.m03791 GTP-binding protein (ERG) identical to
GTP-binding protein ERG SP:O82653 from [Arabidopsis
thaliana]
Length = 437
Score = 28.3 bits (60), Expect = 9.7
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 34 EHNIVCLQEV---WSEKDYLYLKENLKNVLPYSYYFY-SGVLGSGLCVFSKWVIQDVFFH 89
+ ++C+ +V +KD L + E +++ Y YF SG+ GSG+ S++++
Sbjct: 272 QKRVLCMNKVDLVEKKKDLLKVAEEFQDLPAYERYFMISGLKGSGVKDLSQYLMDQAVKK 331
Query: 90 QW 91
W
Sbjct: 332 PW 333
>At1g14940.1 68414.m01785 major latex protein-related / MLP-related
low similarity to major latex protein {Papaver
somniferum}[GI:294060] ; contains Pfam profile PF00407:
Pathogenesis-related protein Bet v I family
Length = 155
Score = 28.3 bits (60), Expect = 9.7
Identities = 12/45 (26%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 5 LMLLLRGIPVVSKNKKERYEAISTYLLKSEHNIVC-LQEVWSEKD 48
+ L L+G+ + K ++YE I ++ KS+ VC + +W +++
Sbjct: 80 MALTLKGLEGQAMEKYKKYEVIYQFIPKSKEGCVCKITLIWEKRN 124
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.320 0.137 0.421
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,931,098
Number of Sequences: 28952
Number of extensions: 442460
Number of successful extensions: 1039
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1029
Number of HSP's gapped (non-prelim): 18
length of query: 404
length of database: 12,070,560
effective HSP length: 83
effective length of query: 321
effective length of database: 9,667,544
effective search space: 3103281624
effective search space used: 3103281624
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 60 (28.3 bits)
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