GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001136-TA|BGIBMGA001136-PA|IPR007653|Signal peptidase 22
kDa subunit
         (108 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   3.7  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    20   4.8  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     20   6.4  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    19   8.4  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    19   8.4  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    19   8.4  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    19   8.4  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    19   8.4  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    19   8.4  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    19   8.4  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 20.6 bits (41), Expect = 3.7
 Identities = 8/22 (36%), Positives = 11/22 (50%)

Query: 56  YYFWDDGNGLKGHSNVTLTLSW 77
           YY +D G      ++V  TL W
Sbjct: 252 YYCYDSGFNSDNLTDVYFTLQW 273


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 20.2 bits (40), Expect = 4.8
 Identities = 7/19 (36%), Positives = 9/19 (47%)

Query: 75  LSWNIIPNAGLLPNIQALG 93
           + W+  P AG  P  Q  G
Sbjct: 176 VQWSATPQAGSTPTYQTQG 194


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 19.8 bits (39), Expect = 6.4
 Identities = 10/26 (38%), Positives = 11/26 (42%)

Query: 48  DFKNMNTKYYFWDDGNGLKGHSNVTL 73
           DF  MN   Y  D   G    +N TL
Sbjct: 433 DFYKMNHPVYHKDPHYGFHNVTNTTL 458


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
          protein 12 protein.
          Length = 127

 Score = 19.4 bits (38), Expect = 8.4
 Identities = 7/21 (33%), Positives = 14/21 (66%)

Query: 28 ELNQVVLWDKIILRGENAVLD 48
          +LNQ++  D+++    N +LD
Sbjct: 30 DLNQILKSDRLLKNYVNCLLD 50


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 19.4 bits (38), Expect = 8.4
 Identities = 10/36 (27%), Positives = 18/36 (50%)

Query: 20  AEYITPSNELNQVVLWDKIILRGENAVLDFKNMNTK 55
           A +++  N  +  +  D+     E A+LDFK  + K
Sbjct: 426 ATFLSEQNIQSTSIHGDRYQSEREKALLDFKTGHRK 461


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 19.4 bits (38), Expect = 8.4
 Identities = 5/22 (22%), Positives = 13/22 (59%)

Query: 2   ILSNLFNWNVKQLFLYLTAEYI 23
           +++++F W +  L  Y T + +
Sbjct: 220 LVNDIFGWQILFLITYATLQIL 241


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 19.4 bits (38), Expect = 8.4
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 32  VVLWDKIILRGENAVLDFKNMNTKYYF 58
           VV+   I ++ E +V DF   +T  YF
Sbjct: 129 VVIIYSICVQTEKSVFDFLCRHTVEYF 155


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 19.4 bits (38), Expect = 8.4
 Identities = 6/17 (35%), Positives = 9/17 (52%)

Query: 1   MILSNLFNWNVKQLFLY 17
           MI +  F W +  + LY
Sbjct: 206 MIFNEFFGWPIIMIILY 222


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 19.4 bits (38), Expect = 8.4
 Identities = 5/22 (22%), Positives = 13/22 (59%)

Query: 2   ILSNLFNWNVKQLFLYLTAEYI 23
           +++++F W +  L  Y T + +
Sbjct: 220 LVNDIFGWQILFLITYATLQIL 241


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
          protein protein.
          Length = 127

 Score = 19.4 bits (38), Expect = 8.4
 Identities = 7/21 (33%), Positives = 14/21 (66%)

Query: 28 ELNQVVLWDKIILRGENAVLD 48
          +LNQ++  D+++    N +LD
Sbjct: 30 DLNQILKSDRLLKNYVNCLLD 50


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.321    0.138    0.433 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,992
Number of Sequences: 317
Number of extensions: 1148
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of query: 108
length of database: 114,650
effective HSP length: 49
effective length of query: 59
effective length of database: 99,117
effective search space:  5847903
effective search space used:  5847903
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.5 bits)
S2: 38 (19.4 bits)